Clone Sequence Records
BO08303.3prime Sequence
947 bp (902 high quality bases) assembled on 2006-01-06
> BO08303.3prime
ATGGTCTAGAAAGCTTGCTTTGTTGACCAGGCCGCGAGCTTTGGGATACG
CCGAAGCTGGCTTCTTTGCCGGCAGACGGCCCGTGGGCGGACGGCGGTTC
GAGTCCAGATTTGAGGCGGCACTTGGCAGCCCCCGGCTTGACTTAATGTT
GCGAACATTGGGTATGGAGCTGCCCACAGCGACGCCAGCACCTGGTCCAG
CTCCTCCATTGGCATTCGCGTTGATAATGTTCTCTAGACGGCTGCGCAGT
GAGTTTGTGTGCGAGTCCACGATGTCTATATCATCTCCGCCCGTTTGCAT
GGCTTGAGCGAGCACCGCCTGCAGCGAGGCGGACACCTTAGGCGTACGGT
ACTCCTGGGTGGTGCGACACGGCATCTCCAGCTCGTAGTTCACGATGTTC
TCGCTCTTGAAGCGTAGAGAGCTCGGTGAATTCGATTTGGCTTCCTGCAG
AGCGTATTCGGAGGTGGGCCTTCTGCGCTGAGGATGCGATACCGGTCGCT
TGCTGCTGAACTTGCCATCACCACCAGGAGGCGTGGGCAGCGACATCGAA
GAGAATTTCCATTCCTCCTGCTCCTCGTCATACTTGGCCTGCGTGTACAG
GCGCTGCTTGACCTCGATGGGCACAAAATTGTCGATGATAAGAAGCTGGC
GTTTTAGCTCCTTGACCAGCTCGTTCTGAGCCATCTCGAGCTCCCTAAGA
TCCTGGTTGTGGTCGGACTTGCAATCGTTGAGTTCCTGCTGAAGAGCCAA
ATATTTGGCGTAGCATTTGGAGAGCTTGCGCTTCTTAAGCTCCACCTCTT
GTTCAAGTGAAACATTTCGTTCGCGAATTTCCAGAGTAGTCTCCTCCTGC
AGTTCCAGCTGCTGTTGGATCTCANTTTCACGCTTCTTGCGCTCAGCGAT
CTCCACCAGCTTCTTCTCCAGCTCTATCTGGCGCTCACTGTACGTGT
BO08303.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:21:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7293-PA | 2355 | Klp68D-RA | 1424..2352 | 947..19 | 4626 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:41:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp68D-RB | 2971 | CG7293-RB | 1581..2509 | 947..19 | 4634 | 99.9 | Minus |
| Klp68D-RA | 2998 | CG7293-RA | 1608..2536 | 947..19 | 4634 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11797485..11798413 | 947..19 | 4634 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:41:33 has no hits.
BO08303.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:43:25 Download gff for
BO08303.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7293-PA | 1424..2355 | 15..947 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:36:22 Download gff for
BO08303.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7293-PA | 1424..2355 | 15..947 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:39:41 Download gff for
BO08303.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 1608..2539 | 15..947 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:16:51 Download gff for
BO08303.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 1608..2539 | 15..947 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:16:51 Download gff for
BO08303.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11797485..11798416 | 15..947 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:39:41 Download gff for
BO08303.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11790585..11791516 | 15..947 | 99 | | Minus |
BO08303.5prime Sequence
877 bp (874 high quality bases) assembled on 2006-01-06
> BO08303.5prime
GAAGTTATCAGTCGACATGAGTGCCAAGAGCAGGAGACCTGGCACCGGCA
GCAGCCAGACGCCAAACGAGTGCGTCCAGGTGGTGGTCCGATGCAGGCCC
ATGAGCAACAGAGAACGCTCGGAAAGATCGCCGGAGGTGGTCAACGTGTA
TCCGAATCGAGGCGTTGTGGAGCTGCAGAATGTGGTCGATGGCAATAAGG
AGCAGCGCAAGGTTTTCACCTACGATGCCGCCTATGATGCGAGTGCAACG
CAGACGACGCTCTACCATGAAGTGGTCTTTCCCCTAGTCAGTTCCGTTTT
GGAGGGATTCAACGGATGTATATTTGCCTATGGACAAACGGGCACTGGTA
AAACCTTCACAATGGAGGGAGTACGCGGAAATGACGAACTGATGGGCATA
ATACCGCGCACATTCGAACAGATCTGGCTGCACATTAATCGCACCGAGAA
TTTCCAGTTTCTGGTCGATGTATCCTACCTAGAGATTTATATGGAGGAGC
TGCGCGATCTGCTAAAGCCCAACTCTAAGCATTTGGAGGTGCGGGAACGT
GGATCGGGCGTTTATGTGCCCAATCTGCACGCCATTAACTGCAAGAGTGT
CGAAGATATGATCAAAGTGATGCAGGTGGGCAACAAGAACCGCACAGTGG
GATTCACCAACATGAATGAGCATAGTTCAAGATCCCACGCCATTTTCATG
ATCAAAATCGAGATGTGCGATACGGANACGAACACCATCAAAGTGGGCAA
ACTGAATCTCATCGATTTGGCGGGCAGTGAGCGGCAGTCCAAGACAGGAG
CATCAGCGGAGCGGCTAAAGGAAGCCAGCAAGATTAATCTGGCACTCTCG
TCGCTGGGCAACGTGATCTCCGCCCTG
BO08303.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:21:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7293-PA | 2355 | Klp68D-RA | 1..861 | 17..877 | 4286 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:17:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp68D-RB | 2971 | CG7293-RB | 158..1018 | 17..877 | 4294 | 99.9 | Plus |
| Klp68D-RA | 2998 | CG7293-RA | 185..1045 | 17..877 | 4294 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:16:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11795957..11796621 | 17..681 | 3325 | 100 | Plus |
| 3L | 28110227 | 3L | 11796725..11796922 | 680..877 | 979 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:17:00 has no hits.
BO08303.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:43:26 Download gff for
BO08303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7293-PA | 1..861 | 17..877 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:36:24 Download gff for
BO08303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7293-PA | 1..861 | 17..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 16:00:16 Download gff for
BO08303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 182..1045 | 14..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:31:18 Download gff for
BO08303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 182..1045 | 14..877 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:31:18 Download gff for
BO08303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11795954..11796621 | 14..681 | 99 | -> | Plus |
| 3L | 11796727..11796922 | 682..877 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 16:00:16 Download gff for
BO08303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11789827..11790022 | 682..877 | 99 | | Plus |
| arm_3L | 11789054..11789721 | 14..681 | 99 | -> | Plus |
BO08303.complete Sequence
2386 bp (2386 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631142
> BO08303.complete
GAAGTTATCAGTCGACATGAGTGCCAAGAGCAGGAGACCTGGCACCGGCA
GCAGCCAGACGCCAAACGAGTGCGTCCAGGTGGTGGTCCGATGCAGGCCC
ATGAGCAACAGAGAACGCTCGGAAAGATCGCCGGAGGTGGTCAACGTGTA
TCCGAATCGAGGCGTTGTGGAGCTGCAGAATGTGGTCGATGGCAATAAGG
AGCAGCGCAAGGTTTTCACCTACGATGCCGCCTATGATGCGAGTGCAACG
CAGACGACGCTCTACCATGAAGTGGTCTTTCCCCTAGTCAGTTCCGTTTT
GGAGGGATTCAACGGATGTATATTTGCCTATGGACAAACGGGCACTGGTA
AAACCTTCACAATGGAGGGAGTACGCGGAAATGACGAACTGATGGGCATA
ATACCGCGCACATTCGAACAGATCTGGCTGCACATTAATCGCACCGAGAA
TTTCCAGTTTCTGGTCGATGTATCCTACCTAGAGATTTATATGGAGGAGC
TGCGCGATCTGCTAAAGCCCAACTCTAAGCATTTGGAGGTGCGGGAACGT
GGATCGGGCGTTTATGTGCCCAATCTGCACGCCATTAACTGCAAGAGTGT
CGAAGATATGATCAAAGTGATGCAGGTGGGCAACAAGAACCGCACAGTGG
GATTCACCAACATGAATGAGCATAGTTCAAGATCCCACGCCATTTTCATG
ATCAAAATCGAGATGTGCGATACGGAAACGAACACCATCAAAGTGGGCAA
ACTGAATCTCATCGATTTGGCGGGCAGTGAGCGGCAGTCCAAGACAGGAG
CATCAGCGGAGCGGCTAAAGGAAGCCAGCAAGATTAATCTGGCACTCTCG
TCGCTGGGCAACGTGATCTCCGCCCTGGCCGAAAGTTCGCCACATGTTCC
GTATCGTGACTCAAAGCTGACGCGATTGTTGCAGGATTCGTTGGGTGGCA
ATTCCAAGACCATTATGATTGCCAACATTGGACCATCCAATTACAATTAT
AACGAAACGCTTACAACGCTGCGGTACGCTTCGCGGGCCAAGTCCATCCA
GAATCAGCCGATTAAGAATGAGGATCCACAGGATGCCAAGTTGAAGGAGT
ACCAAGAGGAAATTGAGCGACTCAAGCGGCTAATAGGTCCGCAACAGCAG
CAACGCAGTGAAAAGCAGGTCACGGCCAAGAAGCAGCGCGTCAAGAAGCC
CAAAAAGGAGACCGTAACTAAAGAGATGTCAGACTCTCTGCAGGTTTCAA
CAATTGAGCAGCCGGTGGAGGATGACAGCGATCCCGAGGGTGCCGAGTCC
GAATCGGATAAGGAAAACGAGGCCGAGGTGGCGAAGTCCAACGAGGAACT
GGAACGGGAGCGCGTCGAGAACTCAAAACTGGCAGCCAAACTCGCAGAAT
TGGAGGGTCAACTTGTTCGCGGCGGAAAAAACCTGCTGGACACGTACAGT
GAGCGCCAGATAGAGCTGGAGAAGAAGCTGGTGGAGATCGCTGAGCGCAA
GAAGCGTGAAATTGAGATCCAACAGCAGCTGGAACTGCAGGAGGAGACTA
CTCTGGAAATTCGCGAACGAAATGTTTCACTTGAACAAGAGGTGGAGCTT
AAGAAGCGCAAGCTCTCCAAATGCTACGCCAAATATTTGGCTCTTCAGCA
GGAACTCAACGATTGCAAGTCCGACCACAACCAGGATCTTAGGGAGCTCG
AGATGGCTCAGAACGAGCTGGTCAAGGAGCTAAAACGCCAGCTTCTTATC
ATCGACAATTTTGTGCCCATCGAGGTCAAGCAGCGCCTGTACACGCAGGC
CAAGTATGACGAGGAGCAGGAGGAATGGAAATTCTCTTCGATGTCGCTGC
CCACGCCTCCTGGTGGTGATGGCAAGTTCAGCAGCAAGCGACCGGTATCG
CATCCTCAGCGCAGAAGGCCCACCTCCGAATACGCTCTGCAGGAAGCCAA
ATCGAATTCACCGAGCTCTCTACGCTTCAAGAGCGAGAACATCGTGAACT
ACGAGCTGGAGATGCCGTGTCGCACCACCCAGGAGTACCGTACGCCTAAG
GTGTCCGCCTCGCTGCAGGCGGTGCTCGCTCAAGCCATGCAAACGGGCGG
AGATGATATAGACATCGTGGACTCGCACACAAACTCACTGCGCAGCCGTC
TAGAGAACATTATCAACGCGAATGCCAATGGAGGAGCTGGACCAGGTGCT
GGCGTCGCTGTGGGCAGCTCCATACCCAATGTTCGCAACATTAAGTCAAG
CCGGGGGCTGCCAAGTGCCGCCTCAAATCTGGACTCGAACCGCCGTCCGC
CCACGGGCCGTCTGCCGGCAAAGAAGCCAGCTTCGGCGTATCCCAAAGCT
CGCGGCCTGGTCAACAAAGCAAGCTTTCTAGACCAT
BO08303.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:54:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp68D-RB | 2355 | CG7293-PB | 1..2352 | 17..2368 | 11760 | 100 | Plus |
| Klp68D-RA | 2355 | CG7293-PA | 1..2352 | 17..2368 | 11760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:54:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp68D-RB | 2971 | CG7293-RB | 158..2509 | 17..2368 | 11760 | 100 | Plus |
| Klp68D-RA | 2998 | CG7293-RA | 185..2536 | 17..2368 | 11760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11796725..11798413 | 680..2368 | 8445 | 100 | Plus |
| 3L | 28110227 | 3L | 11795957..11796621 | 17..681 | 3325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:54:08 has no hits.
BO08303.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:01:03 Download gff for
BO08303.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 1..2355 | 17..2372 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:19:31 Download gff for
BO08303.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 186..2543 | 14..2372 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:34:28 Download gff for
BO08303.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 185..2536 | 17..2370 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:01:03 Download gff for
BO08303.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 186..2543 | 14..2372 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:28:21 Download gff for
BO08303.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 185..2536 | 17..2370 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:28:21 Download gff for
BO08303.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11795957..11796621 | 17..681 | 100 | -> | Plus |
| 3L | 11796727..11798413 | 682..2370 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:34:28 Download gff for
BO08303.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11789057..11789721 | 17..681 | 100 | -> | Plus |
| arm_3L | 11789827..11791513 | 682..2370 | 99 | | Plus |
BO08303.pep Sequence
Translation from 16 to 2386
> BO08303.pep
MSAKSRRPGTGSSQTPNECVQVVVRCRPMSNRERSERSPEVVNVYPNRGV
VELQNVVDGNKEQRKVFTYDAAYDASATQTTLYHEVVFPLVSSVLEGFNG
CIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTFEQIWLHINRTENFQFLV
DVSYLEIYMEELRDLLKPNSKHLEVRERGSGVYVPNLHAINCKSVEDMIK
VMQVGNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKVGKLNLID
LAGSERQSKTGASAERLKEASKINLALSSLGNVISALAESSPHVPYRDSK
LTRLLQDSLGGNSKTIMIANIGPSNYNYNETLTTLRYASRAKSIQNQPIK
NEDPQDAKLKEYQEEIERLKRLIGPQQQQRSEKQVTAKKQRVKKPKKETV
TKEMSDSLQVSTIEQPVEDDSDPEGAESESDKENEAEVAKSNEELERERV
ENSKLAAKLAELEGQLVRGGKNLLDTYSERQIELEKKLVEIAERKKREIE
IQQQLELQEETTLEIRERNVSLEQEVELKKRKLSKCYAKYLALQQELNDC
KSDHNQDLRELEMAQNELVKELKRQLLIIDNFVPIEVKQRLYTQAKYDEE
QEEWKFSSMSLPTPPGGDGKFSSKRPVSHPQRRRPTSEYALQEAKSNSPS
SLRFKSENIVNYELEMPCRTTQEYRTPKVSASLQAVLAQAMQTGGDDIDI
VDSHTNSLRSRLENIINANANGGAGPGAGVAVGSSIPNVRNIKSSRGLPS
AASNLDSNRRPPTGRLPAKKPASAYPKARGLVNKASFLDH
BO08303.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:45:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp68D-PB | 784 | CG7293-PB | 1..784 | 1..784 | 3970 | 100 | Plus |
| Klp68D-PA | 784 | CG7293-PA | 1..784 | 1..784 | 3970 | 100 | Plus |
| Klp64D-PA | 677 | CG10642-PA | 19..615 | 18..610 | 1059 | 40.2 | Plus |
| Kif3C-PA | 649 | CG17461-PA | 2..538 | 17..557 | 861 | 39 | Plus |
| Khc-PA | 975 | CG7765-PA | 11..555 | 18..574 | 733 | 34.2 | Plus |
