Clone BO08357 Report

Search the DGRC for BO08357

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:83
Well:57
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO08357.pep: validated full length
Sequenced Size:1351

Clone Sequence Records

BO08357.3prime Sequence

876 bp (819 high quality bases) assembled on 2006-01-06

> BO08357.3prime
ATGGTCTAGAAAGCTTGCGTTGAATTCCAGAGTATTCGCCTCCGTCATCG
TCGTACGCATGCGGCTCTGGTCGCTCTGGGAACGACGAAGTCCGCCCGGA
CGCCATCCGCTCCTCCAGCGCTTAATGCATCCCAGCAAGGACCAGTTGAT
GGACTTGGAGCGACTCAGCACATAGACATACGGATCCGAGGTGAAGTGCA
GCGCCGTAAGAACATCGGCGATGATGAAGAACTTGTTCGATGCGGGCACC
CGATTTGGAGCTATAGCCAACGGGATGGCGATCATCTGTGGCATCCAGCA
GATGACGAACGAGATGCTGAGGAACGCCATTAGTTTGGCGAACTTGATCT
CGACTGGCGAGGAGTCGGTGGCCGCCATTGTGACGCTAACGCTGTGCCTG
TACTGCCTTGCCGGCTGTACACTGCGATGGCTGTTTCCGCTTCCGGTGCT
CAGCTGCGTCTGGTAGAGGGTGGTGCCGCTGCTGCTCTCGGGATCGATGC
TGATGGCACTGTTTTTGTCCCTGGAAACCAGGTCGTAGTGCATATGCCGC
TTGGCCGTGCGACTCCTTCCGATCACACAGAGCAAGGTGTGGGCCACGAA
GAGGTTGCAGGCCACGATTACAATGCACAGCAGGGTACCGAAGACCATAA
AGAGCACCGCATACGTCTTGTTCCACACGCCCGGCGCATCGCGATATCGT
ATACACTTAAGCTGGTCCGGATTGGATTCATCGATGTATGCACCAAAACC
AACGAATGGCAGGAACGTGATCACCACGGCGATCATCAGAATGCTGTTGA
TGCTCTTGCGAATGAGCTCGTAGGTAATGTGCTTGTGGTAGATAAAGGGT
CTGGCTAGGGGCATCCATCTTTCTGC

BO08357.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG7497-PA 1320 CG7497-RA 460..1317 876..19 4265 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG7497-RC 1822 CG7497-RC 670..1527 876..19 4275 99.9 Minus
CG7497-RB 1696 CG7497-RB 670..1527 876..19 4275 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17636945..17637301 639..283 1785 100 Minus
3L 28110227 3L 17637442..17637706 283..19 1325 100 Minus
3L 28110227 3L 17636691..17636888 833..636 990 100 Minus
3L 28110227 3L 17636491..17636535 876..832 210 97.8 Minus
Blast to na_te.dros performed on 2015-02-10 21:41:15 has no hits.

BO08357.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:00 Download gff for BO08357.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7497-PA 460..1320 16..876 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:38:39 Download gff for BO08357.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7497-PA 460..1320 16..876 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:40:52 Download gff for BO08357.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7497-RB 670..1527 19..876 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:49:04 Download gff for BO08357.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7497-RB 670..1527 19..876 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:49:04 Download gff for BO08357.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 17636491..17636535 832..876 97 -> Minus
3L 17636693..17636885 639..831 100 -> Minus
3L 17636946..17637301 283..638 100 -> Minus
3L 17637443..17637706 19..282 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:40:52 Download gff for BO08357.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17629591..17629635 832..876 97 -> Minus
arm_3L 17629793..17629985 639..831 100 -> Minus
arm_3L 17630046..17630401 283..638 100 -> Minus
arm_3L 17630543..17630806 19..282 100   Minus

BO08357.5prime Sequence

921 bp (819 high quality bases) assembled on 2006-01-06

> BO08357.5prime
GAAGTTATCAGTCGACATGAAAAAGAAATATCGTTTGCGGCCAGTTAGAT
TTTCACCTGAATCACCTGCAATCGAACGCAATTATCATACCGGCAAAATG
GAAACCACAACACCTGTGCTCGACCTGTTGATGCCGCACAACTCAACTAC
TGTGGCGCCTCCGAAAGCGCTCTATGCAAATCGAAATCGCCTGATTATTG
GTGTTATTATCATGGTTCTGGGCGTTTTTGGCAATTCGCTGGCCCTTTTC
ATTTTGGCGCGCAAGAAGCTCAACAAAAACAGCAAATACACGCTCATGCT
GCGATGCCTGGCGACCAACAATCTGGTGGCTCTACTGGGCATGCTGACCA
CGACGCTGCTGAAAATGTATCTCTCAAAGGAAGTCCTGCAGTCGTTCATC
CGAGTGGATTGCGTGGGACTCGTGGTTTGGCGATTTTTCGGGCTCAGTTC
TGGATGCATTGCAGCAGTTATGGCGGCAGAAAGATGGATGGCCCTAGCCA
GACCCTTTATCTACCACAAGCACATTACCTACGAGCTCATTCGCAAGAGC
ATCAACAGCATTCTGATGATCGCCGTGGTGATCACGTTCCTGCCATTCGT
TGGTTTTGGTGCATACATCGATGAATCCAATCCGGACCAGCTTAAGTGTA
TACGATATCGCGATGCGCCGGGCGTGTGGAACAAGACGTATGCGGTGCTC
TTTATGGTCTTCGGTACCCTGCTGTGCATTGTAATCGTGGCCTGCAACCT
CTTCGTGGCCCACACCTTGCTCTGTGTGATCGGAAGGAGTCGCACGGCCA
AGCGGCATATGCACTACGACCTGGTTTCCAGGGACAAAAACAGTGCCATC
AGCATCGATCCCGAGAGCAGCAGCGGCACCACCCTCTACCAGACGCAGCT
GAGCACCGGAAGCGGGAACAG

BO08357.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG7497-PA 1320 CG7497-RA 1..905 17..921 4500 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG7497-RC 1822 CG7497-RC 211..1115 17..921 4510 99.9 Plus
CG7497-RB 1696 CG7497-RB 211..1115 17..921 4510 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17633659..17633945 17..303 1435 100 Plus
3L 28110227 3L 17636318..17636535 303..520 1090 100 Plus
3L 28110227 3L 17636945..17637153 713..921 1030 99.5 Plus
3L 28110227 3L 17636691..17636888 519..716 990 100 Plus
Blast to na_te.dros performed 2015-02-11 18:32:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsub\bilbo 5540 Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). 2733..2792 409..348 125 69.4 Minus

BO08357.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:01 Download gff for BO08357.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7497-PA 1..905 17..921 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:38:41 Download gff for BO08357.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7497-PA 1..905 17..921 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:29:51 Download gff for BO08357.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7497-RB 211..1115 17..921 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:06:28 Download gff for BO08357.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7497-RB 211..1115 17..921 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:06:28 Download gff for BO08357.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 17633659..17633945 17..303 100 -> Plus
3L 17636319..17636535 304..520 100 -> Plus
3L 17636693..17636885 521..713 100 -> Plus
3L 17636946..17637153 714..921 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:29:51 Download gff for BO08357.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17626759..17627045 17..303 100 -> Plus
arm_3L 17629419..17629635 304..520 100 -> Plus
arm_3L 17629793..17629985 521..713 100 -> Plus
arm_3L 17630046..17630253 714..921 99   Plus

BO08357.complete Sequence

1351 bp (1351 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ631160

> BO08357.complete
GAAGTTATCAGTCGACATGAAAAAGAAATATCGTTTGCGGCCAGTTAGAT
TTTCACCTGAATCACCTGCAATCGAACGCAATTATCATACCGGCAAAATG
GAAACCACAACACCTGTGCTCGACCTGTTGATGCCGCACAACTCAACTAC
TGTGGCGCCTCCGAAAGCGCTCTATGCAAATCGAAATCGCCTGATTATTG
GTGTTATTATCATGGTTCTGGGCGTTTTTGGCAATTCGCTGGCCCTTTTC
ATTTTGGCGCGCAAGAAGCTCAACAAAAACAGCAAATACACGCTCATGCT
GCGATGCCTGGCGACCAACAATCTGGTGGCTCTACTGGGCATGCTGACCA
CGACGCTGCTGAAAATGTATCTCTCAAAGGAAGTCCTGCAGTCGTTCATC
CGAGTGGATTGCGTGGGACTCGTGGTTTGGCGATTTTTCGGGCTCAGTTC
TGGATGCATTGCAGCAGTTATGGCGGCAGAAAGATGGATGGCCCTAGCCA
GACCCTTTATCTACCACAAGCACATTACCTACGAGCTCATTCGCAAGAGC
ATCAACAGCATTCTGATGATCGCCGTGGTGATCACGTTCCTGCCATTCGT
TGGTTTTGGTGCATACATCGATGAATCCAATCCGGACCAGCTTAAGTGTA
TACGATATCGCGATGCGCCGGGCGTGTGGAACAAGACGTATGCGGTGCTC
TTTATGGTCTTCGGTACCCTGCTGTGCATTGTAATCGTGGCCTGCAACCT
CTTCGTGGCCCACACCTTGCTCTGTGTGATCGGAAGGAGTCGCACGGCCA
AGCGGCATATGCACTACGACCTGGTTTCCAGGGACAAAAACAGTGCCATC
AGCATCGATCCCGAGAGCAGCAGCGGCACCACCCTCTACCAGACGCAGCT
GAGCACCGGAAGCGGAAACAGCCATCGCAGTGTACAGCCGGCAAGGCAGT
ACAGGCACAGCGTTAGCGTCACAATGGCGGCCACCGACTCCTCGCCAGTC
GAGATCAAGTTCGCCAAACTAATGGCGTTCCTCAGCATCTCGTTCGTCAT
CTGCTGGATGCCACAGATGATCGCCATCCCGTTGGCTATAGCTCCAAATC
GGGTGCCCGCATCGAACAAGTTCTTCATCATCGCCGATGTTCTTACGGCG
CTGCACTTCACCTCGGATCCGTATGTCTATGTGCTGAGTCGCTCCAAGTC
CATCAACTGGTCCTTGCTGGGATGCATTAAGCGCTGGAGGAGCGGATGGC
GTCCGGGCGGACTTCGTCGTTCCCAGAGCGACCAGAGCCGCATGCGTACG
ACGATGACGGAGGCGAATACTCTGGAATTCAACGCAAGCTTTCTAGACCA
T

BO08357.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG7497-RC 1239 CG7497-PC 1..1236 98..1333 6180 100 Plus
CG7497-RB 1239 CG7497-PB 1..1236 98..1333 6180 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7497-RC 1822 CG7497-RC 211..1527 17..1333 6585 100 Plus
CG7497-RB 1696 CG7497-RB 211..1527 17..1333 6585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:29:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17636945..17637301 713..1069 1785 100 Plus
3L 28110227 3L 17633659..17633945 17..303 1435 100 Plus
3L 28110227 3L 17637442..17637706 1069..1333 1325 100 Plus
3L 28110227 3L 17636318..17636535 303..520 1090 100 Plus
3L 28110227 3L 17636691..17636888 519..716 990 100 Plus
Blast to na_te.dros performed 2014-11-27 10:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsub\bilbo 5540 Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). 2733..2792 409..348 125 69.4 Minus

BO08357.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:10:21 Download gff for BO08357.complete
Subject Subject Range Query Range Percent Splice Strand
CG7497-RA 1..1320 17..1336 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:30:47 Download gff for BO08357.complete
Subject Subject Range Query Range Percent Splice Strand
CG7497-RB 211..1527 17..1333 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:39:14 Download gff for BO08357.complete
Subject Subject Range Query Range Percent Splice Strand
CG7497-RB 211..1527 17..1335 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:10:21 Download gff for BO08357.complete
Subject Subject Range Query Range Percent Splice Strand
CG7497-RA 211..1527 17..1333 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:23:09 Download gff for BO08357.complete
Subject Subject Range Query Range Percent Splice Strand
CG7497-RB 211..1527 17..1335 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:23:09 Download gff for BO08357.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17636946..17637301 714..1069 100 -> Plus
3L 17637443..17637706 1070..1335 99   Plus
3L 17633659..17633945 17..303 100 -> Plus
3L 17636319..17636535 304..520 100 -> Plus
3L 17636693..17636885 521..713 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:39:14 Download gff for BO08357.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17626759..17627045 17..303 100 -> Plus
arm_3L 17629419..17629635 304..520 100 -> Plus
arm_3L 17629793..17629985 521..713 100 -> Plus
arm_3L 17630046..17630401 714..1069 100 -> Plus
arm_3L 17630543..17630806 1070..1335 99   Plus

BO08357.pep Sequence

Translation from 16 to 1351

> BO08357.pep
MKKKYRLRPVRFSPESPAIERNYHTGKMETTTPVLDLLMPHNSTTVAPPK
ALYANRNRLIIGVIIMVLGVFGNSLALFILARKKLNKNSKYTLMLRCLAT
NNLVALLGMLTTTLLKMYLSKEVLQSFIRVDCVGLVVWRFFGLSSGCIAA
VMAAERWMALARPFIYHKHITYELIRKSINSILMIAVVITFLPFVGFGAY
IDESNPDQLKCIRYRDAPGVWNKTYAVLFMVFGTLLCIVIVACNLFVAHT
LLCVIGRSRTAKRHMHYDLVSRDKNSAISIDPESSSGTTLYQTQLSTGSG
NSHRSVQPARQYRHSVSVTMAATDSSPVEIKFAKLMAFLSISFVICWMPQ
MIAIPLAIAPNRVPASNKFFIIADVLTALHFTSDPYVYVLSRSKSINWSL
LGCIKRWRSGWRPGGLRRSQSDQSRMRTTMTEANTLEFNASFLDH

BO08357.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7497-PC 412 CG7497-PC 1..412 28..439 2114 100 Plus
CG7497-PB 412 CG7497-PB 1..412 28..439 2114 100 Plus