Clone BO08362 Report

Search the DGRC for BO08362

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:83
Well:62
Vector:pDNR-Dual
Associated Gene/Transcriptl(1)G0469-RA
Protein status:BO08362.pep: validated full length
Sequenced Size:997

Clone Sequence Records

BO08362.3prime Sequence

989 bp (819 high quality bases) assembled on 2006-01-06

> BO08362.3prime
ATGGTCTAGAAAGCTTGCATTGATCAGGTGCAGCAGCACGTGATTGGCAC
TCGTCGTTACCTGTCGCTTTCGCAGATCCTGCTGACGACTTCCGTAGCGG
CACCAGTACACAAAATGCTTATTATTGTTCCACAGACTCTGTTTGGCTTT
GCGCGCCACCGACACCTGATTGCGAATATCCTTCTCGTTGTGCGGCACCT
TTTCCTTGTCGGCAAAGTTATTGATACGCAGCTCCCATCCGTGACTCCAA
ATATCCGCCAATTGCATCTTGATCAACTTGTATGTACCATTCTCACGGAT
TTTCACCGAATATATCTCAATGGTCTCCGGCTTGGGTTTATTGTCTTTGG
CCACCTTGCAGAGCACGATTCCATACCAAGAGGCGACAGGCGTCTCATTC
TCGTCCTGCGTCTCCAGGAAACTGCTACCGTTGCGCGGGATGACCAGCCG
CTGGGATTGGTTTTGGATTTGGCTGTGACTATGGCTGTGATTGCGATGCG
GCGGCGATGGGTGGTTGGTCAGTGGGCAGTCGAGCTCCTCCAGAGCGTCC
ACGTCGAGGTCGTTGTCACCGGTGTCGGCTGCTGCGGCCGCTGCTGCTGC
GTTAGCTGCGGCCGCCTCGGCTGCGGCGCTGCTGCGGATCTCGACCACGA
AACCGCACTCGACGACGGCGCAAAAGATGCGCTGCTCCTCGGGCTTGAAC
CACTTGGATTCGCGCAGCTTTTGCACTGCCACACTGCTGCCGAATGTGGC
GCCCACGGTGCCGCCAGCAATTCCATTCTTTTGCCCGCTGGGCGGCAGTA
GGCGGTGGGCGGTGCCGGTTGTGGGATTCTGATGCTGCTGCAGTGGCGGT
GGCCAATTGGAGGTGGGCGAGCTGGGCGCCGATTGGGAGTAACCGCTGGC
AGGTGGCGCCCACCGGTTGGTTGTTGTGACCCTGCAGTGGCCACCATTTC
AGCGAGCTGACAAAAGCTGTCGACCGGTTCATGTCGACT

BO08362.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG32597-PA 966 l(1)G0469-RA 72..963 910..19 4460 100 Minus
CG32597-PA 966 l(1)G0469-RA 19..73 964..910 275 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0469-RD 3709 CG32597-RD 388..1350 982..19 4735 99.6 Minus
l(1)G0469-RA 1761 CG32597-RA 388..1350 982..19 4735 99.6 Minus
l(1)G0469-RC 2729 CG32597-RC 388..1308 982..61 4525 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:27:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14210434..14211052 345..964 3050 99.8 Plus
X 23542271 X 14206594..14206777 163..346 920 100 Plus
X 23542271 X 14206320..14206468 19..167 745 100 Plus
Blast to na_te.dros performed on 2015-02-10 21:27:09 has no hits.

BO08362.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:09 Download gff for BO08362.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32597-PA 1..966 16..982 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:38:53 Download gff for BO08362.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32597-PA 1..966 16..982 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:12:18 Download gff for BO08362.3prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0469-RA 388..1350 19..982 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:47:11 Download gff for BO08362.3prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0469-RA 388..1350 19..982 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:47:11 Download gff for BO08362.3prime
Subject Subject Range Query Range Percent Splice Strand
X 14206320..14206466 19..165 100 <- Plus
X 14206597..14206775 166..344 100 <- Plus
X 14210434..14211070 345..982 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:12:18 Download gff for BO08362.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14100353..14100499 19..165 100 <- Plus
arm_X 14100630..14100808 166..344 100 <- Plus
arm_X 14104467..14105103 345..982 99   Plus

BO08362.5prime Sequence

925 bp (791 high quality bases) assembled on 2006-01-06

> BO08362.5prime
GAAGTTATCAGTCGACATGAACCGTTCGAACAGCTTTGTCAGCTCGCTGA
AATGGTGGCCACTGCAGGGTCACAACAACCAACCGGTGGCGCCACCTGCC
AGCGGTTACTCCCAATCGGCGCCCAGCTCGCCCACCTCCAATTGGCCACC
GCCACTGCAGCAGCATCAGAATCCCACAACCGGCACCGCCCACCGCCTAC
TGCCGCCCAGCGGGCAAAAGAATGGAATTGCTGGCGGCACCGTGGGCGCC
ACATTCGGCAGCAGTGTGGCAGTGCAAAAGCTGCGCGAATCCAAGTGGTT
CAAGCCCGAGGAGCAGCGCATCTTTTGCGCCGTCGTCGAGTGCGGTTTCG
TGGTCGAGATCCGCAGCAGCGCCGCAGCCGAGGCGGCCGCAGCTAACGCA
GCAGCAGCGGCCGCAGCAGCCGACACCGGTGACAACGACCTCGACGTGGA
CGCTCTGGAGGAGCTCGACTGCCCACTGACCAACCACCCATCGCCGCCGC
ATCGCAATCACAGCCATAGTCACAGCCAAATCCAAAACCAATCCCAGCGG
CTGGTCATCCCGCGCAACGGTAGCAGTTTCCTGGAGACGCAGGACGAGAA
TGAGACGCCTGTCGCCTCTTGGTATGGAATCGTGCTCTGCAAGGTGGCCA
AAGACAATAAACCCAAGCCGGAGACCATTGAGATATATTCGGTGAAAATC
CGTGAGAATGGTACATACAAGTTGATCAAGATGCAATTGGCGGATATTTG
GAGTCACGGATGGGAGCTGCGTATCAATAACTTTGCCGACAAGGAAAAGG
TGCCGCACAACGAGAAGGATATTCGCAATCANGTGTCGGTGGCGCGCAAA
GCCAAACAGAGTCTGTGGAACAATAATAAGCATTTTGTGTACTGGTGCCG
CTACGGAAGTCGTCAGCAGGATCTG

BO08362.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG32597-PA 966 l(1)G0469-RA 1..909 17..925 4526 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:46:22
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0469-RD 3709 CG32597-RD 388..1296 17..925 4534 99.9 Plus
l(1)G0469-RC 2729 CG32597-RC 388..1296 17..925 4534 99.9 Plus
l(1)G0469-RA 1761 CG32597-RA 388..1296 17..925 4534 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14210434..14211070 653..17 3185 100 Minus
X 23542271 X 14206594..14206777 835..652 909 99.5 Minus
X 23542271 X 14206374..14206466 925..833 465 100 Minus
Blast to na_te.dros performed on 2015-02-13 00:46:18 has no hits.

BO08362.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:10 Download gff for BO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32597-PA 1..909 17..925 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:38:55 Download gff for BO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32597-PA 1..909 17..925 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:28:12 Download gff for BO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0469-RA 388..1296 17..925 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:59:53 Download gff for BO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0469-RA 388..1296 17..925 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:59:53 Download gff for BO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14206374..14206466 833..925 100 <- Minus
X 14206597..14206775 654..832 99 <- Minus
X 14210434..14211070 17..653 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:28:12 Download gff for BO08362.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14100407..14100499 833..925 100 <- Minus
arm_X 14100630..14100808 654..832 99 <- Minus
arm_X 14104467..14105103 17..653 100   Minus

BO08362.complete Sequence

997 bp (997 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ631162

> BO08362.complete
GAAGTTATCAGTCGACATGAACCGTTCGAACAGCTTTGTCAGCTCGCTGA
AATGGTGGCCACTGCAGGGTCACAACAACCAACCGGTGGCGCCACCTGCC
AGCGGTTACTCCCAATCGGCGCCCAGCTCGCCCACCTCCAATTGGCCACC
GCCACTGCAGCAGCATCAGAATCCCACAACCGGCACCGCCCACCGCCTAC
TGCCGCCCAGCGGGCAAAAGAATGGAATTGCTGGCGGCACCGTGGGCGCC
ACATTCGGCAGCAGTGTGGCAGTGCAAAAGCTGCGCGAATCCAAGTGGTT
CAAGCCCGAGGAGCAGCGCATCTTTTGCGCCGTCGTCGAGTGCGGTTTCG
TGGTCGAGATCCGCAGCAGCGCCGCAGCCGAGGCGGCCGCAGCTAACGCA
GCAGCAGCGGCCGCAGCAGCCGACACCGGTGACAACGACCTCGACGTGGA
CGCTCTGGAGGAGCTCGACTGCCCACTGACCAACCACCCATCGCCGCCGC
ATCGCAATCACAGCCATAGTCACAGCCAAATCCAAAACCAATCCCAGCGG
CTGGTCATCCCGCGCAACGGTAGCAGTTTCCTGGAGACGCAGGACGAGAA
TGAGACGCCTGTCGCCTCTTGGTATGGAATCGTGCTCTGCAAGGTGGCCA
AAGACAATAAACCCAAGCCGGAGACCATTGAGATATATTCGGTGAAAATC
CGTGAGAATGGTACATACAAGTTGATCAAGATGCAATTGGCGGATATTTG
GAGTCACGGATGGGAGCTGCGTATCAATAACTTTGCCGACAAGGAAAAGG
TGCCGCACAACGAGAAGGATATTCGCAATCAGGTGTCGGTGGCGCGCAAA
GCCAAACAGAGTCTGTGGAACAATAATAAGCATTTTGTGTACTGGTGCCG
CTACGGAAGTCGTCAGCAGGATCTGCGAAAGCGACAGGTAACGACGAGTG
CCAATCACGTGCTGCTGCACCTGATCAATGCAAGCTTTCTAGACCAT

BO08362.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:43:16
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0469-RD 966 CG32597-PD 1..963 17..979 4815 100 Plus
l(1)G0469-RA 966 CG32597-PA 1..963 17..979 4815 100 Plus
l(1)G0469-RC 1017 CG32597-PC 1..921 17..937 4605 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:43:18
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0469-RD 3709 CG32597-RD 388..1350 17..979 4815 100 Plus
l(1)G0469-RA 1761 CG32597-RA 388..1350 17..979 4815 100 Plus
l(1)G0469-RC 2729 CG32597-RC 388..1308 17..937 4605 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14210434..14211070 653..17 3185 100 Minus
X 23542271 X 14206594..14206777 835..652 920 100 Minus
X 23542271 X 14206320..14206468 979..831 745 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:43:14 has no hits.

BO08362.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:10:22 Download gff for BO08362.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0469-RA 1..966 17..982 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:30:50 Download gff for BO08362.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0469-RA 386..1348 17..979 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:33:33 Download gff for BO08362.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0469-RA 388..1350 17..981 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:10:23 Download gff for BO08362.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0469-RA 386..1348 17..979 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:25:15 Download gff for BO08362.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0469-RA 388..1350 17..981 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:25:15 Download gff for BO08362.complete
Subject Subject Range Query Range Percent Splice Strand
X 14206317..14206466 833..981 98 <- Minus
X 14206597..14206775 654..832 100 <- Minus
X 14210434..14211070 17..653 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:33:33 Download gff for BO08362.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14100350..14100499 833..981 98 <- Minus
arm_X 14100630..14100808 654..832 100 <- Minus
arm_X 14104467..14105103 17..653 100   Minus

BO08362.pep Sequence

Translation from 16 to 997

> BO08362.pep
MNRSNSFVSSLKWWPLQGHNNQPVAPPASGYSQSAPSSPTSNWPPPLQQH
QNPTTGTAHRLLPPSGQKNGIAGGTVGATFGSSVAVQKLRESKWFKPEEQ
RIFCAVVECGFVVEIRSSAAAEAAAANAAAAAAAADTGDNDLDVDALEEL
DCPLTNHPSPPHRNHSHSHSQIQNQSQRLVIPRNGSSFLETQDENETPVA
SWYGIVLCKVAKDNKPKPETIEIYSVKIRENGTYKLIKMQLADIWSHGWE
LRINNFADKEKVPHNEKDIRNQVSVARKAKQSLWNNNKHFVYWCRYGSRQ
QDLRKRQVTTSANHVLLHLINASFLDH

BO08362.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0469-PD 321 CG32597-PD 1..321 1..321 1718 100 Plus
l(1)G0469-PA 321 CG32597-PA 1..321 1..321 1718 100 Plus
l(1)G0469-PC 338 CG32597-PC 1..309 1..309 1650 99.4 Plus