Clone BO08363 Report

Search the DGRC for BO08363

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:83
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG8195-RA
Protein status:BO08363.pep: validated full length
Sequenced Size:1381

Clone Sequence Records

BO08363.3prime Sequence

981 bp (784 high quality bases) assembled on 2006-01-06

> BO08363.3prime
ATGGTCTAGAAAGCTTGCATCGCTGTTGCTTATCAGCGACTCCTGTTGTT
CGTCATCGTTGACCCTAACAATGCTTGGCTTATGGCACCGGCAGACTTTT
CTATACACAATCCTAAAGAGCTTCATCAGTGGGTCGGAATCGTCGTTACG
CATCAATAGCGAAACGAACACCAGGGCCACAAAGATGGGTATCGAGCCCA
TGTAGAACATCGGCGAATACGGTTTGTTCTTCAGCAGGACATCGAACAGG
ATGGCTAGCGGAATCTGTAGCGACATTGCCAGCGTGCCAATCAGTGAGGA
TGTCAAAAAGCAGCCCCACAGCCAAAGAGCCTCCGACAGCACAGTGCCAA
CTAAGCCGTTCAAAAATAGAAGGGCAAACTGCCCTTGACTGGGCAGCTCA
AAGGTTTCTATTTTGGTGAAGTGGAGGATAAAGAATATTGGCCATAAAAG
CAACATATTCCATAGGCCAACAAAACCGAAAAACAATGGTATATCGACCT
TCTCCTCCGTATCGCTTTTTCGCTTCACGAAAACCAAATAGGCGGCATAG
AAGAAAGCGCTGAAAAGGGCTAAAAGGACGCCTCTGGTCATCTTGGTATC
GTGTAGGTCGTTCATGGTGATGGCCACCACTCCGCCAATGTTCATGGCCA
CCGCAATCACCTTGGTGATAGTCAGCTTGTCACCTGTTGCCGAGGGAAAT
ACGGCTGCCAGGCAGATAATGAAGAATGACGATGTTGAGCTAACCAGTGT
TATCATGGCCGCCTCGTCCATTTCCAGGGCCAGCTGAAAGAAGTAATTGG
CCGCAAACCAGAGCAGACAAAAGAGTAGCGCAGTCTTTGCCGTTTTGTGG
TGTGTCTTTTGGCGCCTAATTCTCAAGCTGGCGGCATACAAAAGCCTGGC
CATTAAAGCATCGGTGGCTTCGTGGGCAGACATCTCTCTGACTTCGGCCA
TCTTGCTGAAGCGCACACTTCTTAACACTGA

BO08363.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG8195-PA 1350 CG8195-RA 392..1347 974..19 4730 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 16:31:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG8195-RA 2280 CG8195-RA 855..1810 974..19 4750 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 16:31:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15563741..15564240 475..974 2470 99.6 Plus
2R 25286936 2R 15563270..15563689 64..483 2085 99.8 Plus
2R 25286936 2R 15563167..15563215 19..67 245 100 Plus
Blast to na_te.dros performed on 2015-01-31 16:31:20 has no hits.

BO08363.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:11 Download gff for BO08363.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8195-PA 386..1350 15..980 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:38:56 Download gff for BO08363.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8195-PA 386..1350 15..980 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:24:40 Download gff for BO08363.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8195-RA 849..1813 15..980 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:42:57 Download gff for BO08363.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8195-RA 849..1813 15..980 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:42:57 Download gff for BO08363.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 15563163..15563212 15..64 96 <- Plus
2R 15563271..15563682 65..476 100 <- Plus
2R 15563743..15564244 477..980 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:24:40 Download gff for BO08363.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11450668..11450717 15..64 96 <- Plus
arm_2R 11450776..11451187 65..476 100 <- Plus
arm_2R 11451248..11451749 477..980 99   Plus

BO08363.5prime Sequence

873 bp (823 high quality bases) assembled on 2006-01-06

> BO08363.5prime
GAAGTTATCAGTCGACATGCTAGGTCGCACACAACGTCTCCTGTTGGGCA
TATCAATACTGGTACTAGTCGATGTGGTTTGGGTCTCATCCAGTGAGCTG
ACAAAGTTCCTGTACAATGAGGCCAATTTTGACAAGCCCTTCTTCTGCAC
ATACTTCAAAACCTCCATGTTCAGCATTTACCTGCTAGTCATCGGTATCC
TGGCTCCCTGGAAAGAGTCATGCGAGCGACAGAATGGAAACTATGCTATG
ATGGAGCAGAATGCAGATGACGAGAATTATTACTCCAATCAGGCTGTTTT
GGGAGACCCAACCTATGTGCCCATCAGATCGCCTCACTTAGGAGCCGGAG
GACAATCCAATGGCACCTCAAACTCCATATCGGGCACCGAAAGCGATGAT
TCAAGTGTAAGAAGTGTGCGCTTCAGCAAGATGGCCGAAGTCAGAGAGAT
GTCTGCCCACGAAGCCACCGATGCCTTAATGGCCAGGCTTTCGTATGCCG
CCAGCTTGAGAATTAGGCGCCAAAAGACACACCACAAAACGGCAAAGACT
GCGCTACTCTTTTGTCTGCTCTGGTTTGCGGCCAATTACTTCTTTCAGCT
GGCCCTGGAAATGGACGAGGCGGCCATGATAACACTGGTTAGCTCAACAT
CGTCATTCTTCATTATCTGCCTGGCAGCCGTATTTCCCTCGGCAACAGGT
GACAAGCTGACTATCACCAAGGTGATTGCGGTGGCCATGAACATTGGCGG
AGTGGTGGCCATCACCATGAACGACCTACACGATACCAAGATGACCAGAG
GCGTCCTTTTAGCCCTTTTCAGCGCTTTCTTCTATGCCGCCTATTTGGTT
TTCGTGAAGCGAAAAAGCGATAC

BO08363.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG8195-PA 1350 CG8195-RA 1..857 17..873 4285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:16:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG8195-RA 2280 CG8195-RA 463..1320 16..873 4290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:16:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15563775..15564347 873..301 2865 100 Minus
2R 25286936 2R 15564521..15564663 247..105 715 100 Minus
2R 25286936 2R 15564722..15564812 106..16 455 100 Minus
2R 25286936 2R 15564410..15564464 302..248 275 100 Minus
Blast to na_te.dros performed on 2015-02-04 02:16:41 has no hits.

BO08363.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:12 Download gff for BO08363.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8195-PA 1..857 17..873 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:38:58 Download gff for BO08363.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8195-PA 1..857 17..873 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 04:48:52 Download gff for BO08363.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8195-RA 463..1320 16..873 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:35:23 Download gff for BO08363.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8195-RA 463..1320 16..873 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:35:23 Download gff for BO08363.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 15564521..15564661 107..247 100 <- Minus
2R 15564722..15564816 11..106 95 <- Minus
2R 15563775..15564346 302..873 100 <- Minus
2R 15564411..15564464 248..301 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 04:48:52 Download gff for BO08363.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11452026..11452166 107..247 100 <- Minus
arm_2R 11452227..11452321 11..106 95 <- Minus
arm_2R 11451280..11451851 302..873 100 <- Minus
arm_2R 11451916..11451969 248..301 100 <- Minus

BO08363.complete Sequence

1381 bp (1381 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ631163

> BO08363.complete
GAAGTTATCAGTCGACATGCTAGGTCGCACACAACGTCTCCTGTTGGGCA
TATCAATACTGGTACTAGTCGATGTGGTTTGGGTCTCATCCAGTGAGCTG
ACAAAGTTCCTGTACAATGAGGCCAATTTTGACAAGCCCTTCTTCTGCAC
ATACTTCAAAACCTCCATGTTCAGCATTTACCTGCTAGTCATCGGTATCC
TGGCTCCCTGGAAAGAGTCATGCGAGCGACAGAATGGAAACTATGCTATG
ATGGAGCAGAATGCAGATGACGAGAATTATTACTCCAATCAGGCTGTTTT
GGGAGACCCAACCTATGTGCCCATCAGATCGCCTCACTTAGGAGCCGGAG
GACAATCCAATGGCACCTCAAACTCCATATCGGGCACCGAAAGCGATGAT
TCAAGTGTAAGAAGTGTGCGCTTCAGCAAGATGGCCGAAGTCAGAGAGAT
GTCTGCCCACGAAGCCACCGATGCCTTAATGGCCAGGCTTTCGTATGCCG
CCAGCTTGAGAATTAGGCGCCAAAAGACACACCACAAAACGGCAAAGACT
GCGCTACTCTTTTGTCTGCTCTGGTTTGCGGCCAATTACTTCTTTCAGCT
GGCCCTGGAAATGGACGAGGCGGCCATGATAACACTGGTTAGCTCAACAT
CGTCATTCTTCATTATCTGCCTGGCAGCCGTATTTCCCTCGGCAACAGGT
GACAAGCTGACTATCACCAAGGTGATTGCGGTGGCCATGAACATTGGCGG
AGTGGTGGCCATCACCATGAACGACCTACACGATACCAAGATGACCAGAG
GCGTCCTTTTAGCCCTTTTCAGCGCTTTCTTCTATGCCGCCTATTTGGTT
TTCGTGAAGCGAAAAAGCGATACGGAGGAGAAGGTCGATATACCATTGTT
TTTCGGTTTTGTTGGCCTATGGAATATGTTGCTTTTATGGCCAATATTCT
TTATCCTCCACTTCACCAAAATAGAAACCTTTGAGCTGCCCAGTCAAGGG
CAGTTTGCCCTTCTATTTTTGAACGGCTTAGTTGGCACTGTGCTGTCGGA
GGCTCTTTGGCTGTGGGGCTGCTTTTTGACATCCTCACTGATTGGCACGC
TGGCAATGTCGCTACAGATTCCGCTAGCCATCCTGTTCGATGTCCTGCTG
AAGAACAAACCGTATTCGCCGATGTTCTACATGGGCTCGATACCCATCTT
TGTGGCCCTGGTGTTCGTTTCGCTATTGATGCGTAACGACGATTCCGACC
CACTGATGAAGCTCTTTAGGATTGTGTATAGAAAAGTCTGCCGGTGCCAT
AAGCCAAGCATTGTTAGGGTCAACGATGACGAACAACAGGAGTCGCTGAT
AAGCAACAGCGATGCAAGCTTTCTAGACCAT

BO08363.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG8195-RA 1350 CG8195-PA 1..1347 17..1363 6735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG8195-RA 2280 CG8195-RA 463..1810 16..1363 6740 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15563741..15564347 907..301 3035 100 Minus
2R 25286936 2R 15563270..15563689 1318..899 2085 99.8 Minus
2R 25286936 2R 15564521..15564663 247..105 715 100 Minus
2R 25286936 2R 15564722..15564812 106..16 455 100 Minus
2R 25286936 2R 15564410..15564464 302..248 275 100 Minus
2R 25286936 2R 15563167..15563215 1363..1315 245 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:39:33 has no hits.

BO08363.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:10:24 Download gff for BO08363.complete
Subject Subject Range Query Range Percent Splice Strand
CG8195-RA 1..1350 17..1367 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:30:52 Download gff for BO08363.complete
Subject Subject Range Query Range Percent Splice Strand
CG8195-RA 448..1798 16..1367 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:40:39 Download gff for BO08363.complete
Subject Subject Range Query Range Percent Splice Strand
CG8195-RA 464..1810 17..1365 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:10:25 Download gff for BO08363.complete
Subject Subject Range Query Range Percent Splice Strand
CG8195-RA 448..1798 16..1367 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:27:34 Download gff for BO08363.complete
Subject Subject Range Query Range Percent Splice Strand
CG8195-RA 464..1810 17..1365 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:27:34 Download gff for BO08363.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15564411..15564464 248..301 100 <- Minus
2R 15564521..15564661 107..247 100 <- Minus
2R 15564722..15564811 17..106 100   Minus
2R 15563165..15563212 1318..1365 95 <- Minus
2R 15563271..15563682 906..1317 100 <- Minus
2R 15563743..15564346 302..905 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:39 Download gff for BO08363.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11450670..11450717 1318..1365 95 <- Minus
arm_2R 11450776..11451187 906..1317 100 <- Minus
arm_2R 11451248..11451851 302..905 100 <- Minus
arm_2R 11451916..11451969 248..301 100 <- Minus
arm_2R 11452026..11452166 107..247 100 <- Minus
arm_2R 11452227..11452316 17..106 100   Minus

BO08363.pep Sequence

Translation from 16 to 1381

> BO08363.pep
MLGRTQRLLLGISILVLVDVVWVSSSELTKFLYNEANFDKPFFCTYFKTS
MFSIYLLVIGILAPWKESCERQNGNYAMMEQNADDENYYSNQAVLGDPTY
VPIRSPHLGAGGQSNGTSNSISGTESDDSSVRSVRFSKMAEVREMSAHEA
TDALMARLSYAASLRIRRQKTHHKTAKTALLFCLLWFAANYFFQLALEMD
EAAMITLVSSTSSFFIICLAAVFPSATGDKLTITKVIAVAMNIGGVVAIT
MNDLHDTKMTRGVLLALFSAFFYAAYLVFVKRKSDTEEKVDIPLFFGFVG
LWNMLLLWPIFFILHFTKIETFELPSQGQFALLFLNGLVGTVLSEALWLW
GCFLTSSLIGTLAMSLQIPLAILFDVLLKNKPYSPMFYMGSIPIFVALVF
VSLLMRNDDSDPLMKLFRIVYRKVCRCHKPSIVRVNDDEQQESLISNSDA
SFLDH

BO08363.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG8195-PA 449 CG8195-PA 1..449 1..449 2295 100 Plus
CG42322-PJ 733 CG42322-PJ 305..555 180..432 164 23.4 Plus
CG42322-PI 733 CG42322-PI 305..555 180..432 164 23.4 Plus
CG42322-PN 743 CG42322-PN 305..555 180..432 164 23.4 Plus
CG42322-PD 578 CG31203-PE 305..522 180..401 157 23.3 Plus