Clone Sequence Records
BO08364.3prime Sequence
392 bp (391 high quality bases) assembled on 2006-01-06
> BO08364.3prime
ATGGTCTAGAAAGCTTGCATGTTTCATGTCCCCGATGTTCTGGGGCGATG
GCTTGGGCATGTGACTTACGACTAGAGAACTATAATATAGGAGACGTTGG
CATAATAATATGTCTAAGAGATTGACAATCGGCTTGGGGTCTCCGGCTGA
GGTCCTGGATGCCGTGCCTTTGGCCCTTCGTACGGCCGTGATAGTGCGCA
CAAGCCGCGATTTGATTGGTGATTGGTCGTCCTGTCGCCGGTCGTCCTGC
AGCCAATGCGCTGCCTCCAAAAAGGACTCGTCGTTGGCCTCCTGGCCGGG
AGGAGGGTGGTGTCCTCGGGTCGGGGGTTGAGTCGTTGGCAGCCCGGCAA
TGCAGTTGGCAACACTCTGTTTGGCCATGTCGACTGATAACT
BO08364.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31781-PB | 363 | CG31781-RB | 1..360 | 378..19 | 1800 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 16:33:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:33:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16877840..16878199 | 378..19 | 1800 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:33:06 has no hits.
BO08364.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:13 Download gff for
BO08364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-PB | 1..363 | 18..378 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:38:59 Download gff for
BO08364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-PB | 1..363 | 18..378 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:16:25 Download gff for
BO08364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877837..16878201 | 17..382 | 99 | -> | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:16:25 Download gff for
BO08364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877837..16878201 | 17..382 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:43:31 Download gff for
BO08364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877837..16878201 | 17..382 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:43:31 Download gff for
BO08364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877837..16878201 | 17..382 | 99 | -> | Minus |
BO08364.5prime Sequence
392 bp (391 high quality bases) assembled on 2006-01-06
> BO08364.5prime
GAAGTTATCAGTCGACATGGCCAAACAGAGTGTTGCCAACTGCATTGCCG
GGCTGCCAACGACTCAACCCCCGACCCGAGGACACCACCCTCCTCCCGGC
CAGGAGGCCAACGACGAGTCCTTTTTGGAGGCAGCGCATTGGCTGCAGGA
CGACCGGCGACAGGACGACCAATCACCAATCAAATCGCGGCTTGTGCGCA
CTATCACGGCCGTACGAAGGGCCAAAGGCACGGCATCCAGGACCTCAGCC
GGAGACCCCAAGCCGATTGTCAATCTCTTAGACATATTATTATGCCAACG
TCTCCTATATTATAGTTCTCTAGTCGTAAGTCACATGCCCAAGCCATCGC
CCCAGAACATCGGGGACATGAAACATGCAAGCTTTCTAGACC
BO08364.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31781-PB | 363 | CG31781-RB | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 04:32:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:32:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16877840..16878199 | 17..376 | 1800 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:32:08 has no hits.
BO08364.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:14 Download gff for
BO08364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-PB | 1..363 | 17..377 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:39:01 Download gff for
BO08364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-PB | 1..363 | 17..377 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:11:04 Download gff for
BO08364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877837..16878201 | 13..378 | 99 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:11:04 Download gff for
BO08364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877837..16878201 | 13..378 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:06:09 Download gff for
BO08364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877837..16878201 | 13..378 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:06:09 Download gff for
BO08364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877837..16878201 | 13..378 | 99 | -> | Plus |
BO08364.complete Sequence
394 bp (394 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ631164
> BO08364.complete
GAAGTTATCAGTCGACATGGCCAAACAGAGTGTTGCCAACTGCATTGCCG
GGCTGCCAACGACTCAACCCCCGACCCGAGGACACCACCCTCCTCCCGGC
CAGGAGGCCAACGACGAGTCCTTTTTGGAGGCAGCGCATTGGCTGCAGGA
CGACCGGCGACAGGACGACCAATCACCAATCAAATCGCGGCTTGTGCGCA
CTATCACGGCCGTACGAAGGGCCAAAGGCACGGCATCCAGGACCTCAGCC
GGAGACCCCAAGCCGATTGTCAATCTCTTAGACATATTATTATGCCAACG
TCTCCTATATTATAGTTCTCTAGTCGTAAGTCACATGCCCAAGCCATCGC
CCCAGAACATCGGGGACATGAAACATGCAAGCTTTCTAGACCAT
BO08364.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 00:59:41 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 00:59:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:59:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16877840..16878199 | 17..376 | 1800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:59:40 has no hits.
BO08364.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:14 Download gff for
BO08364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-RB | 1..363 | 17..377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:23:10 Download gff for
BO08364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-RB | 1852..2220 | 13..385 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:14 Download gff for
BO08364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-RB | 1852..2220 | 13..385 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:37 Download gff for
BO08364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877840..16878199 | 17..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:37 Download gff for
BO08364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877840..16878199 | 17..378 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:07 Download gff for
BO08364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877840..16878199 | 17..378 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:07 Download gff for
BO08364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877840..16878199 | 17..378 | 99 | | Plus |
BO08364.pep Sequence
Translation from 16 to 394
> BO08364.pep
MAKQSVANCIAGLPTTQPPTRGHHPPPGQEANDESFLEAAHWLQDDRRQD
DQSPIKSRLVRTITAVRRAKGTASRTSAGDPKPIVNLLDILLCQRLLYYS
SLVVSHMPKPSPQNIGDMKHASFLDH
Sequence BO08364.pep has no blast hits.