Clone BO08364 Report

Search the DGRC for BO08364

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:83
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG31781-RB
Protein status:BO08364.pep: validated full length
Sequenced Size:394

Clone Sequence Records

BO08364.3prime Sequence

392 bp (391 high quality bases) assembled on 2006-01-06

> BO08364.3prime
ATGGTCTAGAAAGCTTGCATGTTTCATGTCCCCGATGTTCTGGGGCGATG
GCTTGGGCATGTGACTTACGACTAGAGAACTATAATATAGGAGACGTTGG
CATAATAATATGTCTAAGAGATTGACAATCGGCTTGGGGTCTCCGGCTGA
GGTCCTGGATGCCGTGCCTTTGGCCCTTCGTACGGCCGTGATAGTGCGCA
CAAGCCGCGATTTGATTGGTGATTGGTCGTCCTGTCGCCGGTCGTCCTGC
AGCCAATGCGCTGCCTCCAAAAAGGACTCGTCGTTGGCCTCCTGGCCGGG
AGGAGGGTGGTGTCCTCGGGTCGGGGGTTGAGTCGTTGGCAGCCCGGCAA
TGCAGTTGGCAACACTCTGTTTGGCCATGTCGACTGATAACT

BO08364.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31781-PB 363 CG31781-RB 1..360 378..19 1800 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 16:33:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:33:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16877840..16878199 378..19 1800 100 Minus
Blast to na_te.dros performed on 2015-02-11 16:33:06 has no hits.

BO08364.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:13 Download gff for BO08364.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31781-PB 1..363 18..378 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:38:59 Download gff for BO08364.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31781-PB 1..363 18..378 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:16:25 Download gff for BO08364.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16877837..16878201 17..382 99 -> Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:16:25 Download gff for BO08364.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16877837..16878201 17..382 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:43:31 Download gff for BO08364.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16877837..16878201 17..382 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:43:31 Download gff for BO08364.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16877837..16878201 17..382 99 -> Minus

BO08364.5prime Sequence

392 bp (391 high quality bases) assembled on 2006-01-06

> BO08364.5prime
GAAGTTATCAGTCGACATGGCCAAACAGAGTGTTGCCAACTGCATTGCCG
GGCTGCCAACGACTCAACCCCCGACCCGAGGACACCACCCTCCTCCCGGC
CAGGAGGCCAACGACGAGTCCTTTTTGGAGGCAGCGCATTGGCTGCAGGA
CGACCGGCGACAGGACGACCAATCACCAATCAAATCGCGGCTTGTGCGCA
CTATCACGGCCGTACGAAGGGCCAAAGGCACGGCATCCAGGACCTCAGCC
GGAGACCCCAAGCCGATTGTCAATCTCTTAGACATATTATTATGCCAACG
TCTCCTATATTATAGTTCTCTAGTCGTAAGTCACATGCCCAAGCCATCGC
CCCAGAACATCGGGGACATGAAACATGCAAGCTTTCTAGACC

BO08364.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG31781-PB 363 CG31781-RB 1..360 17..376 1800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 04:32:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:32:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16877840..16878199 17..376 1800 100 Plus
Blast to na_te.dros performed on 2015-02-12 04:32:08 has no hits.

BO08364.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:14 Download gff for BO08364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31781-PB 1..363 17..377 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:39:01 Download gff for BO08364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31781-PB 1..363 17..377 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:11:04 Download gff for BO08364.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16877837..16878201 13..378 99 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:11:04 Download gff for BO08364.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16877837..16878201 13..378 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:06:09 Download gff for BO08364.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16877837..16878201 13..378 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:06:09 Download gff for BO08364.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16877837..16878201 13..378 99 -> Plus

BO08364.complete Sequence

394 bp (394 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ631164

> BO08364.complete
GAAGTTATCAGTCGACATGGCCAAACAGAGTGTTGCCAACTGCATTGCCG
GGCTGCCAACGACTCAACCCCCGACCCGAGGACACCACCCTCCTCCCGGC
CAGGAGGCCAACGACGAGTCCTTTTTGGAGGCAGCGCATTGGCTGCAGGA
CGACCGGCGACAGGACGACCAATCACCAATCAAATCGCGGCTTGTGCGCA
CTATCACGGCCGTACGAAGGGCCAAAGGCACGGCATCCAGGACCTCAGCC
GGAGACCCCAAGCCGATTGTCAATCTCTTAGACATATTATTATGCCAACG
TCTCCTATATTATAGTTCTCTAGTCGTAAGTCACATGCCCAAGCCATCGC
CCCAGAACATCGGGGACATGAAACATGCAAGCTTTCTAGACCAT

BO08364.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 00:59:41 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 00:59:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16877840..16878199 17..376 1800 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:59:40 has no hits.

BO08364.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:14 Download gff for BO08364.complete
Subject Subject Range Query Range Percent Splice Strand
CG31781-RB 1..363 17..377 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:23:10 Download gff for BO08364.complete
Subject Subject Range Query Range Percent Splice Strand
CG31781-RB 1852..2220 13..385 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:14 Download gff for BO08364.complete
Subject Subject Range Query Range Percent Splice Strand
CG31781-RB 1852..2220 13..385 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:37 Download gff for BO08364.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16877840..16878199 17..378 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:37 Download gff for BO08364.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16877840..16878199 17..378 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:07 Download gff for BO08364.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16877840..16878199 17..378 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:07 Download gff for BO08364.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16877840..16878199 17..378 99   Plus

BO08364.pep Sequence

Translation from 16 to 394

> BO08364.pep
MAKQSVANCIAGLPTTQPPTRGHHPPPGQEANDESFLEAAHWLQDDRRQD
DQSPIKSRLVRTITAVRRAKGTASRTSAGDPKPIVNLLDILLCQRLLYYS
SLVVSHMPKPSPQNIGDMKHASFLDH
Sequence BO08364.pep has no blast hits.