Clone Sequence Records
BO08368.3prime Sequence
955 bp (808 high quality bases) assembled on 2006-01-06
> BO08368.3prime
ATGGTCTAGAAAGCTTGCTGTCTCCAACGAGGTGACCACCAGATTGTGGA
ACACGCTGGCCGACTCGCTCATCATCGCCGCCTGTCCGCAAGAATCGCTG
CTGGCGCCGCTCGGCGGTGTCGCCGTTCCCAGCCTCAAGGCGTCCATGAT
CACCTCGAAATCCTTTTGGTTTTGGTTCATGTCGAAATCGACCAGCTCCA
GATGATGGTGCAAATGGTGATGGTGATTGAGATGGTGATGGTCATTCAGC
TTCATCCGTTTGCCTCCGGGCATTTCGACGCCAGCGCCTGCAGCTCCTCC
GATGCCACCGATTCCACTAATTCCTCCCACATTCACATTCACATTCATTC
CCATACCCAAGCCAACCACATCCAGGGGACACTCCTCAATGGCGGAGATG
AGGCGCTGTGGCGGTATGTAGAACTGGGACAGAGCCTCGCGCACCAGGCG
ATCACTTTCGTCCTCGCTGCCGCTATTGCTCCTCAATCTCTTCCTGCTGG
CGGACAAGGCGGCCTTCTCCAGCTGTTCGGCTCCTTGGGTAATCTCTGGA
TCGATTAGCAGCATGGGTGCATTGATGGCGCTCAGCTCCCTGTCCAGTAT
TTCCAGATCGTTGACCAAGTTGCAGCTGGACAGGTGGCGTTTTCGGTTAT
TCACGCGTTCCGATGCCGAGCCCGAAACGGAAAGGGGCGCCGAATTGGCC
GCCTCGGGAGCGGAGGCACCAGCGGGCGTCCCCAACTGCTGACGCTCGGG
CGGTTGATTCTCCAGGGAGCAAATTCCGCCGCGACCCGACGATGATCCGT
TTGAGGAGCCAAAGGCATCGCCCAAAGAGGATGAAGGCTTGCCGTTGGCG
TTGATATTATTGCTAGTGCTATTGCCGGCCGGCTTGGCGTCGTCCATGTT
CGGCTGGAAGAGATCTCACGCGCCAGTTCGGTGCTTGCGCCGCTGTCGCT
GGGTC
BO08368.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-PA | 1305 | CG2865-RA | 407..1302 | 914..19 | 4455 | 99.8 | Minus |
CG2865-PA | 1305 | CG2865-RA | 368..406 | 952..914 | 195 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 14:32:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-RB | 5515 | CG2865-RB | 1031..1965 | 952..19 | 4635 | 99.8 | Minus |
CG2865-RA | 2079 | CG2865-RA | 1090..2024 | 952..19 | 4635 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 14:32:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2281581..2282515 | 19..952 | 4610 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-01-30 14:32:24 has no hits.
BO08368.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:20 Download gff for
BO08368.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-PA | 365..1305 | 16..955 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:39:10 Download gff for
BO08368.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-PA | 365..1305 | 16..955 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:04:06 Download gff for
BO08368.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 1087..2030 | 14..955 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:35:22 Download gff for
BO08368.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 1087..2030 | 14..955 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:35:22 Download gff for
BO08368.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2281575..2282518 | 14..955 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:04:06 Download gff for
BO08368.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2175608..2176551 | 14..955 | 99 | | Plus |
BO08368.5prime Sequence
877 bp (788 high quality bases) assembled on 2006-01-06
> BO08368.5prime
GAAGTTATCAGTCGACATGACCTTGCCCACAAACACACACGCATCTGCAA
ACGACGGCGGCAGCGGCAACAACAACCACAGCAATATCAGCAGTAACAAC
AGCAGCAGCAGCGACGAAGACTCAGACATGTTTGGACCACCCCGCTGCTC
CCCGCCCATCGGCTATCACCATCACCGTTCCCGTGTGCCCATGATCTCGC
CAAAGCTGCGGCAGCGCGAGGAGCGCAAGCGGATCCTCCAGCTCTGCGCC
CACAAGATGGAGAGGATCAAGGACTCGGAGGCGAACCTGCGGCGCAGCGT
CTGCATCAACAACACCTACTGCCGCCTGAATGACGAACTGCGGCGCGAGA
AGCAGATGCGCTACCTCCAGAATCTGCCCAGAACCAGCGACAGCGGCGCA
AGCACCGAACTGGCGCGTGAGAATCTCTTCCAGCCGAACATGGACGACGC
CAAGCCGGCCGGCAATAGCACTAGCAATAATATCAACGCCAACGGCAAGC
CTTCATCCTCTTTTGGCGATGCCTTTGGCTCCTCAAACGGATCATCGTCG
GGTCGCGGCGGAATTTGCTCCCTGGAGAATCAACCGCCCGAGCGTCAGCA
GTTGGGGACGCCCGCTGGTGCCTCCGCTCCCGAGGCGGCCAATTCGGCGC
CCCTTTCCGTTTCGGGCTCGGCATCGGAACGCGTGAATAACCGAAAACGC
CACCTGTCCAGCTGCAACTTGGTCAACGATCTGGAAATACTGGACAGGGA
GCTGAGCGCCATCAATGCACCCATGCTGCTAATCGATCCAGAGATTACCC
AAGGAGCCGAACAGCTGGAGAAGGCCGCCTTTGTCGCCAGCANGAAGAGA
TTGAGGAGCAATAGCGGCAGCGAGGAC
BO08368.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:22:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-PA | 1305 | CG2865-RA | 1..815 | 17..831 | 4075 | 100 | Plus |
CG2865-PA | 1305 | CG2865-RA | 819..861 | 835..877 | 196 | 97.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:42:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-RB | 5515 | CG2865-RB | 664..1524 | 17..877 | 4249 | 99.7 | Plus |
CG2865-RA | 2079 | CG2865-RA | 723..1583 | 17..877 | 4249 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:41:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2282022..2282520 | 877..379 | 2439 | 99.2 | Minus |
X | 23542271 | X | 2292325..2292689 | 381..17 | 1825 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 12:42:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6770..6860 | 27..115 | 207 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2430 | 27..121 | 202 | 69.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6809 | 28..112 | 199 | 74.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2382 | 37..115 | 193 | 72.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2424..2527 | 27..128 | 191 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6788 | 50..112 | 189 | 77.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6887 | 41..115 | 182 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2358 | 59..112 | 180 | 81.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1077..1139 | 50..112 | 180 | 76.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2397..2475 | 42..121 | 172 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6821 | 27..112 | 164 | 68.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1096..1168 | 60..131 | 164 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1482..1571 | 32..117 | 162 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1501..1587 | 20..109 | 162 | 68.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2788..2856 | 50..115 | 158 | 72.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2728..2832 | 8..109 | 158 | 66.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1040..1126 | 30..117 | 158 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2439 | 58..115 | 155 | 74.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2602..2666 | 50..117 | 153 | 72.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6767 | 67..112 | 149 | 80.4 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 972..1040 | 67..136 | 149 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2789..2856 | 41..109 | 144 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2733..2823 | 28..115 | 141 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6839..6920 | 30..115 | 141 | 66.3 | Plus |
TART-A | 13424 | TART-A 13424bp | 911..1003 | 86..182 | 141 | 64.9 | Plus |
TART-A | 13424 | TART-A 13424bp | 12089..12181 | 86..182 | 141 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2581..2648 | 52..117 | 137 | 71 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2346 | 81..121 | 124 | 78 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2897..2938 | 66..107 | 120 | 76.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1061..1093 | 79..111 | 120 | 84.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6746 | 84..112 | 118 | 89.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 122..199 | 42..114 | 116 | 66.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9152..9229 | 42..114 | 116 | 66.7 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 530..615 | 66..151 | 114 | 62.1 | Plus |
BS | 5142 | BS BS 5142bp | 2018..2114 | 30..121 | 114 | 61.2 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 122..176 | 61..109 | 108 | 72.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9152..9206 | 61..109 | 108 | 72.7 | Plus |
BO08368.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:21 Download gff for
BO08368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-PA | 1..861 | 17..877 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:39:12 Download gff for
BO08368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-PA | 1..861 | 17..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:03:03 Download gff for
BO08368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 723..1583 | 17..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:26:32 Download gff for
BO08368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 723..1583 | 17..877 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:26:32 Download gff for
BO08368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2292325..2292689 | 17..381 | 100 | | Minus |
X | 2282022..2282517 | 382..877 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:03:03 Download gff for
BO08368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2176055..2176550 | 382..877 | 99 | <- | Minus |
arm_X | 2186358..2186722 | 17..381 | 100 | | Minus |
BO08368.complete Sequence
1336 bp (1336 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ631166
> BO08368.complete
GAAGTTATCAGTCGACATGACCTTGCCCACAAACACACACGCATCTGCAA
ACGACGGCGGCAGCGGCAACAACAACCACAGCAATATCAGCAGTAACAAC
AGCAGCAGCAGCGACGAAGACTCAGACATGTTTGGACCACCCCGCTGCTC
CCCGCCCATCGGCTATCACCATCACCGTTCCCGTGTGCCCATGATCTCGC
CAAAGCTGCGGCAGCGCGAGGAGCGCAAGCGGATCCTCCAGCTCTGCGCC
CACAAGATGGAGAGGATCAAGGACTCGGAGGCGAACCTGCGGCGCAGCGT
CTGCATCAACAACACCTACTGCCGCCTGAATGACGAACTGCGGCGCGAGA
AGCAGATGCGCTACCTCCAGAATCTGCCCAGAACCAGCGACAGCGGCGCA
AGCACCGAACTGGCGCGTGAGAATCTCTTCCAGCCGAACATGGACGACGC
CAAGCCGGCCGGCAATAGCACTAGCAATAATATCAACGCCAACGGCAAGC
CTTCATCCTCTTTTGGCGATGCCTTTGGCTCCTCAAACGGATCATCGTCG
GGTCGCGGCGGAATTTGCTCCCTGGAGAATCAACCGCCCGAGCGTCAGCA
GTTGGGGACGCCCGCTGGTGCCTCCGCTCCCGAGGCGGCCAATTCGGCGC
CCCTTTCCGTTTCGGGCTCGGCATCGGAACGCGTGAATAACCGAAAACGC
CACCTGTCCAGCTGCAACTTGGTCAACGATCTGGAAATACTGGACAGGGA
GCTGAGCGCCATCAATGCACCCATGCTGCTAATCGATCCAGAGATTACCC
AAGGAGCCGAACAGCTGGAGAAGGCCGCCTTGTCCGCCAGCAGGAAGAGA
TTGAGGAGCAATAGCGGCAGCGAGGACGAAAGTGATCGCCTGGTGCGCGA
GGCTCTGTCCCAGTTCTACATACCGCCACAGCGCCTCATCTCCGCCATTG
AGGAGTGTCCCCTGGATGTGGTTGGCTTGGGTATGGGAATGAATGTGAAT
GTGAATGTGGGAGGAATTAGTGGAATCGGTGGCATCGGAGGAGCTGCAGG
CGCTGGCGTCGAAATGCCCGGAGGCAAACGGATGAAGCTGAATGACCATC
ACCATCTCAATCACCATCACCATTTGCACCATCATCTGGAGCTGGTCGAT
TTCGACATGAACCAAAACCAAAAGGATTTCGAGGTGATCATGGACGCCTT
GAGGCTGGGAACGGCGACACCGCCGAGCGGCGCCAGCAGCGATTCTTGCG
GACAGGCGGCGATGATGAGCGAGTCGGCCAGCGTGTTCCACAATCTGGTG
GTCACCTCGTTGGAGACAGCAAGCTTTCTAGACCAT
BO08368.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:33:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-RB | 1305 | CG2865-PB | 1..1302 | 17..1318 | 6510 | 100 | Plus |
CG2865-RA | 1305 | CG2865-PA | 1..1302 | 17..1318 | 6510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:33:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-RB | 5515 | CG2865-RB | 664..1965 | 17..1318 | 6510 | 100 | Plus |
CG2865-RA | 2079 | CG2865-RA | 723..2024 | 17..1318 | 6510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:33:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2281581..2282520 | 1318..379 | 4700 | 100 | Minus |
X | 23542271 | X | 2292325..2292689 | 381..17 | 1825 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 08:33:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6770..6860 | 27..115 | 207 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2430 | 27..121 | 202 | 69.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6809 | 28..112 | 199 | 74.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2382 | 37..115 | 193 | 72.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2424..2527 | 27..128 | 191 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6788 | 50..112 | 189 | 77.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6887 | 41..115 | 182 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2358 | 59..112 | 180 | 81.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1077..1139 | 50..112 | 180 | 76.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2397..2475 | 42..121 | 172 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6821 | 27..112 | 164 | 68.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1096..1168 | 60..131 | 164 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1482..1571 | 32..117 | 162 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1501..1587 | 20..109 | 162 | 68.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2728..2832 | 8..109 | 158 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2788..2856 | 50..115 | 158 | 72.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1040..1126 | 30..117 | 158 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2439 | 58..115 | 155 | 74.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2602..2666 | 50..117 | 153 | 72.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6767 | 67..112 | 149 | 80.4 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 972..1040 | 67..136 | 149 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2789..2856 | 41..109 | 144 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2733..2823 | 28..115 | 141 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6839..6920 | 30..115 | 141 | 66.3 | Plus |
TART-A | 13424 | TART-A 13424bp | 911..1003 | 86..182 | 141 | 64.9 | Plus |
TART-A | 13424 | TART-A 13424bp | 12089..12181 | 86..182 | 141 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2581..2648 | 52..117 | 137 | 71 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2346 | 81..121 | 124 | 78 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2897..2938 | 66..107 | 120 | 76.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1061..1093 | 79..111 | 120 | 84.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6746 | 84..112 | 118 | 89.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 122..199 | 42..114 | 116 | 66.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9152..9229 | 42..114 | 116 | 66.7 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 530..615 | 66..151 | 114 | 62.1 | Plus |
BO08368.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:10:27 Download gff for
BO08368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 1..1305 | 17..1321 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:56:35 Download gff for
BO08368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 58..1359 | 17..1320 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:40 Download gff for
BO08368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 723..2024 | 17..1320 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:10:28 Download gff for
BO08368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 58..1365 | 17..1323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:20:32 Download gff for
BO08368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 723..2024 | 17..1320 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:20:32 Download gff for
BO08368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2281578..2282517 | 382..1320 | 99 | <- | Minus |
X | 2292325..2292689 | 17..381 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:40 Download gff for
BO08368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2175611..2176550 | 382..1320 | 99 | <- | Minus |
arm_X | 2186358..2186722 | 17..381 | 100 | | Minus |
BO08368.pep Sequence
Translation from 16 to 1336
> BO08368.pep
MTLPTNTHASANDGGSGNNNHSNISSNNSSSSDEDSDMFGPPRCSPPIGY
HHHRSRVPMISPKLRQREERKRILQLCAHKMERIKDSEANLRRSVCINNT
YCRLNDELRREKQMRYLQNLPRTSDSGASTELARENLFQPNMDDAKPAGN
STSNNINANGKPSSSFGDAFGSSNGSSSGRGGICSLENQPPERQQLGTPA
GASAPEAANSAPLSVSGSASERVNNRKRHLSSCNLVNDLEILDRELSAIN
APMLLIDPEITQGAEQLEKAALSASRKRLRSNSGSEDESDRLVREALSQF
YIPPQRLISAIEECPLDVVGLGMGMNVNVNVGGISGIGGIGGAAGAGVEM
PGGKRMKLNDHHHLNHHHHLHHHLELVDFDMNQNQKDFEVIMDALRLGTA
TPPSGASSDSCGQAAMMSESASVFHNLVVTSLETASFLDH
BO08368.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:37:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-PB | 434 | CG2865-PB | 1..434 | 1..434 | 2252 | 100 | Plus |
CG2865-PA | 434 | CG2865-PA | 1..434 | 1..434 | 2252 | 100 | Plus |