Clone BO08387 Report

Search the DGRC for BO08387

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:83
Well:87
Vector:pDNR-Dual
Associated Gene/TranscriptCyp4e2-RA
Protein status:BO08387.pep: validated full length
Sequenced Size:1612

Clone Sequence Records

BO08387.3prime Sequence

942 bp (911 high quality bases) assembled on 2006-01-06

> BO08387.3prime
ATGGTCTAGAAAGCTTGCGTGCCTTTCCTTCAGCCGAATGTATAGACCAT
TTTCGGATTTCAGGGTCAGCACAGCGGAAAGAATAGGGTCGTATTTGTGA
CGGTATGGATCGCGCTTCTTCCTCTCGGCATCAGGGAGTCCAATAGTGGT
GCTTATATAGCCATCCTTAGAGACGAGCTCATCCAGAGCAGGAAGCACCT
CGAAGTTCCTAATGATCTTGGATACCACAGTCTTAATCTCCAGCAGGGCG
AACTTCTGACCAATGCAGTTTCGGGGTCCAGCGCTGAAGGGTACATACTC
AAAAGGTCCTGGTTTCTCCAGCTCAAAGCGCTCAGGTCGGAACTTGTGGG
GATCTTTGAACACCTTTTCGTTATAACCCAGCATCACGAGACCCAGGTTC
AGTGTGGTGCCCTTGGGTACGAGATCCCCATCTATAACATAGTCTTTCTC
CGTAAATCGTCCAATGAAAGGCACGCTGGGATAAACACGCTGGGCCTCCT
TGATAAAGAGATCCAAGTACTTCATTTGGGATATTTCCTGGAAGGTGGCA
TCGCGACCCAGTTCGGAATTACCCATTACTTCGCGTTGCTCCTTAAATAG
TTTGCGCTGTTCATCTTGATGTCTAGAAAGCAAATAGACAGCGAACGACA
CTCCAGAAGTGGTAGTATCATGTCCTTCAAACATAAATGTGGAGACCTCT
TCGTACAGTTCCTTGGAGTTCAGGGGACGACCATCAATAGTGGAGGACAG
CAGAGTGTCTAANAAGGCCATTTTCTTGCGAGTGAACTCATCTCCCGCGT
TGGTCGAAACTGCACCCGATTTGTGGGCTTCAATGCGCTTAGCGATGATC
TCGTTGGTAAAGTCCTGCAGTGTTTTTAGAGTCCTGCTATAGGCCGGGTA
GTCCGGAGCCAAACGATACAGCAGTTCATTGCGCTTCAGCGG

BO08387.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG2060-PA 1581 Cyp4e2-RA 655..1578 942..19 4601 99.8 Minus
CG2062-PA 1596 Cyp4e1-RA 1279..1448 318..149 350 88.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:37:52
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4e2-RB 1880 CG2060-RB 812..1735 942..19 4609 99.9 Minus
Cyp4e2-RA 1783 CG2060-RA 715..1638 942..19 4609 99.9 Minus
Cyp4e1-RA 1772 CG2062-RA 773..1504 876..145 1239 78.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8446601..8447019 437..19 2095 100 Minus
2R 25286936 2R 8445976..8446311 942..607 1669 99.7 Minus
2R 25286936 2R 8446370..8446546 608..432 885 100 Minus
2R 25286936 2R 8449188..8449477 434..145 595 80.3 Minus
2R 25286936 2R 8448714..8448896 789..607 364 79.8 Minus
2L 23513712 2L 9748021..9748416 22..417 315 72 Plus
2R 25286936 2R 8448965..8449128 603..440 310 79.3 Minus
2L 23513712 2L 9748729..9748888 618..777 279 78.1 Plus
2L 23513712 2L 9748513..9748600 456..543 200 81.8 Plus
Blast to na_te.dros performed on 2015-02-11 16:37:47 has no hits.

BO08387.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:53 Download gff for BO08387.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2060-PA 655..1581 15..942 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:40:02 Download gff for BO08387.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2060-PA 655..1581 15..942 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:44:10 Download gff for BO08387.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4e2-RA 715..1641 15..942 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:17:21 Download gff for BO08387.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4e2-RA 715..1641 15..942 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:17:21 Download gff for BO08387.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8445976..8446311 607..942 99 -> Minus
2R 8446372..8446546 432..606 100 -> Minus
2R 8446607..8447022 15..431 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:44:10 Download gff for BO08387.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4333481..4333816 607..942 99 -> Minus
arm_2R 4333877..4334051 432..606 100 -> Minus
arm_2R 4334112..4334527 15..431 99   Minus

BO08387.5prime Sequence

896 bp (842 high quality bases) assembled on 2006-01-06

> BO08387.5prime
GAAGTTATCAGTCGACATGTGGTTCGTGTTGTATATTTTTCTGGCCCTAC
CACTGCTGCTGGTTGCATATCTGGAGTTGAGCACATTCCGCCGGAGAAGA
GTGCTTAACAAGTTCAACGGCCCCCGCGGCCTGCCGCTGATGGGAAACGC
TCATCAAATGGGCAAGAATCCGTCAGAAATACTCGACACGGTTTTCTCCT
GGTGGCATCAGTATGGAAAAGACAACTTCGTCTTTTGGATTGGAACGTAT
TCTAATGTATTGGTCACCAGCTCCAAGTACCTTGAATTCATACTCAGCAG
TCAGACGCTGATCACAAAGTCCGACATTTATCAACTAACACACCCTTGGC
TGGGATTAGGTCTCCTCACCAGTACTGGCAGCAAATGGCATAAACACCGC
AAGATGATCACCCCAGCATTCCACTTCAACATCCTGCAGGACTTCCACGA
GGTGATGAACGAGAACTCCACCAAGTTTATCAAGCACTTAAAGACAGTTG
CTGCCGGGGACAATATATTCGACTTCCAAGAACAGGCCCACTATTTGACC
CTGGATGTCATTTGCGACACAGCGATGGGTGTGTCCATCAATGCCATGGA
AAACCGCAGCTCTTCCATTGTGCAGGCCTTCAAAGACATGTGCTACAACA
TCAACATGAGAGCCTTCCACCCGCTGAAGCGCAATGAACTGCTGTATCGT
TTGGCTCCGGACTACCCGGCCTATAGCAGGACTCTAAAAACACTGCANGA
CTTTACCAACGAGATCATCGCTAAGCGCATTGAAGCCCACAAATCGGGTG
CAGTTTCGACCAACGCGGGAGATGAGTTCACTCGCAAGAAAATGGCCTTT
TTAGACACTCTGCTGTCCTCCACTATTGATGGTCGTCCCCTGAACT

BO08387.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG2060-PA 1581 Cyp4e2-RA 1..880 17..896 4381 99.8 Plus
CG2062-PA 1596 Cyp4e1-RA 325..461 341..477 460 93.4 Plus
CG4105-PA 1581 Cyp4e3-RA 367..464 383..480 390 95.9 Plus
CG2062-PA 1596 Cyp4e1-RA 526..590 542..606 225 93.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:12:16
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4e2-RB 1880 CG2060-RB 158..1037 17..896 4389 99.9 Plus
Cyp4e2-RA 1783 CG2060-RA 61..940 17..896 4389 99.9 Plus
Cyp4e1-RA 1772 CG2062-RA 167..929 131..893 1184 77.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:12:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8445534..8445883 287..636 1750 100 Plus
2R 25286936 2R 8445942..8446201 637..896 1289 99.6 Plus
2R 25286936 2R 8448106..8448452 290..636 940 84.7 Plus
2R 25286936 2R 8444771..8444930 17..176 800 100 Plus
2L 23513712 2L 9749150..9749427 636..359 595 80.9 Minus
2R 25286936 2R 8445356..8445467 175..286 560 100 Plus
2R 25286936 2R 8448714..8448783 824..893 185 84.3 Plus
Blast to na_te.dros performed on 2015-02-12 20:12:16 has no hits.

BO08387.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:45:53 Download gff for BO08387.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2060-PA 1..880 17..896 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:40:03 Download gff for BO08387.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2060-PA 1..880 17..896 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:25:14 Download gff for BO08387.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4e2-RA 55..940 12..896 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:30:12 Download gff for BO08387.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4e2-RA 55..940 12..896 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:30:12 Download gff for BO08387.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8444765..8444930 12..176 98 -> Plus
2R 8445358..8445467 177..286 100 -> Plus
2R 8445534..8445883 287..636 100 -> Plus
2R 8445942..8446201 637..896 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:25:14 Download gff for BO08387.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4332270..4332435 12..176 98 -> Plus
arm_2R 4332863..4332972 177..286 100 -> Plus
arm_2R 4333039..4333388 287..636 100 -> Plus
arm_2R 4333447..4333706 637..896 99   Plus

BO08387.complete Sequence

1612 bp (1612 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ631173

> BO08387.complete
GAAGTTATCAGTCGACATGTGGTTCGTGTTGTATATTTTTCTGGCCCTAC
CACTGCTGCTGGTTGCATATCTGGAGTTGAGCACATTCCGCCGGAGAAGA
GTGCTTAACAAGTTCAACGGCCCCCGCGGCCTGCCGCTGATGGGAAACGC
TCATCAAATGGGCAAGAATCCGTCAGAAATACTCGACACGGTTTTCTCCT
GGTGGCATCAGTATGGAAAAGACAACTTCGTCTTTTGGATTGGAACGTAT
TCTAATGTATTGGTCACCAGCTCCAAGTACCTTGAATTCATACTCAGCAG
TCAGACGCTGATCACAAAGTCCGACATTTATCAACTAACACACCCTTGGC
TGGGATTAGGTCTCCTCACCAGTACTGGCAGCAAATGGCATAAACACCGC
AAGATGATCACCCCAGCATTCCACTTCAACATCCTGCAGGACTTCCACGA
GGTGATGAACGAGAACTCCACCAAGTTTATCAAGCACTTAAAGACAGTTG
CTGCCGGGGACAATATATTCGACTTCCAAGAACAGGCCCACTATTTGACC
CTGGATGTCATTTGCGACACAGCGATGGGTGTGTCCATCAATGCCATGGA
AAACCGCAGCTCTTCCATTGTGCAGGCCTTCAAAGACATGTGCTACAACA
TCAACATGAGAGCCTTCCACCCGCTGAAGCGCAATGAACTGCTGTATCGT
TTGGCTCCGGACTACCCGGCCTATAGCAGGACTCTAAAAACACTGCAGGA
CTTTACCAACGAGATCATCGCTAAGCGCATTGAAGCCCACAAATCGGGTG
CAGTTTCGACCAACGCGGGAGATGAGTTCACTCGCAAGAAAATGGCCTTT
TTAGACACTCTGCTGTCCTCCACTATTGATGGTCGTCCCCTGAACTCCAA
GGAACTGTACGAAGAGGTCTCCACATTTATGTTTGAAGGACATGATACTA
CCACTTCTGGAGTGTCGTTCGCTGTCTATTTGCTTTCTAGACATCAAGAT
GAACAGCGCAAACTATTTAAGGAGCAACGCGAAGTAATGGGTAATTCCGA
ACTGGGTCGCGATGCCACCTTCCAGGAAATATCCCAAATGAAGTACTTGG
ATCTCTTTATCAAGGAGGCCCAGCGTGTTTATCCCAGCGTGCCTTTCATT
GGACGATTTACGGAGAAAGACTATGTTATAGATGGGGATCTCGTACCCAA
GGGCACCACACTGAACCTGGGTCTCGTGATGCTGGGTTATAACGAAAAGG
TGTTCAAAGATCCCCACAAGTTCCGACCTGAGCGCTTTGAGCTGGAGAAA
CCAGGACCTTTTGAGTATGTACCCTTCAGCGCTGGACCCCGAAACTGCAT
TGGTCAGAAGTTCGCCCTGCTGGAGATTAAGACTGTGGTATCCAAGATCA
TTAGGAACTTCGAGGTGCTTCCTGCTCTGGATGAGCTCGTCTCTAAGGAT
GGCTATATAAGCACCACTATTGGACTCCCTGATGCCGAGAGGAAGAAGCG
CGATCCATACCGTCACAAATACGACCCTATTCTTTCCGCTGTGCTGACCC
TGAAATCCGAAAATGGTCTATACATTCGGCTGAAGGAAAGGCACGCAAGC
TTTCTAGACCAT

BO08387.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:00:16
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4e2-RB 1581 CG2060-PB 1..1578 17..1594 7890 100 Plus
Cyp4e2-RA 1581 CG2060-PA 1..1578 17..1594 7890 100 Plus
Cyp4e1-RA 1596 CG2062-PA 115..1452 131..1468 2175 77.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:00:17
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4e2-RB 1880 CG2060-RB 158..1735 17..1594 7890 100 Plus
Cyp4e2-RA 1783 CG2060-RA 61..1638 17..1594 7890 100 Plus
Cyp4e1-RA 1772 CG2062-RA 167..1504 131..1468 2175 77.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8446601..8447019 1176..1594 2095 100 Plus
2R 25286936 2R 8445942..8446311 637..1006 1850 100 Plus
2R 25286936 2R 8445534..8445883 287..636 1750 100 Plus
2R 25286936 2R 8448106..8448452 290..636 940 84.7 Plus
2R 25286936 2R 8446370..8446546 1005..1181 885 100 Plus
2R 25286936 2R 8444771..8444930 17..176 800 100 Plus
2R 25286936 2R 8449188..8449477 1179..1468 595 80.3 Plus
2L 23513712 2L 9749150..9749427 636..359 595 80.9 Minus
2R 25286936 2R 8445356..8445467 175..286 560 100 Plus
2R 25286936 2R 8448533..8448896 643..1006 380 73.6 Plus
2L 23513712 2L 9748021..9748416 1591..1196 315 72 Minus
2R 25286936 2R 8448965..8449128 1010..1173 310 79.3 Plus
2L 23513712 2L 9748729..9748888 995..836 290 78.8 Minus
2L 23513712 2L 9748513..9748600 1157..1070 200 81.8 Minus
Blast to na_te.dros performed on 2014-11-28 01:00:15 has no hits.

BO08387.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:10:08 Download gff for BO08387.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4e2-RA 1..1581 17..1598 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:30:27 Download gff for BO08387.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4e2-RA 54..1640 12..1598 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:36:11 Download gff for BO08387.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4e2-RA 61..1638 17..1596 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:10:08 Download gff for BO08387.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4e2-RA 54..1640 12..1598 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:42:10 Download gff for BO08387.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4e2-RA 61..1638 17..1596 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:42:10 Download gff for BO08387.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8446372..8446546 1007..1181 100 -> Plus
2R 8445534..8445883 287..636 100 -> Plus
2R 8445942..8446311 637..1006 100 -> Plus
2R 8444771..8444930 17..176 100 -> Plus
2R 8445358..8445467 177..286 100 -> Plus
2R 8446607..8447019 1182..1596 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:36:11 Download gff for BO08387.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4332276..4332435 17..176 100 -> Plus
arm_2R 4332863..4332972 177..286 100 -> Plus
arm_2R 4333039..4333388 287..636 100 -> Plus
arm_2R 4333447..4333816 637..1006 100 -> Plus
arm_2R 4333877..4334051 1007..1181 100 -> Plus
arm_2R 4334112..4334524 1182..1596 99   Plus

BO08387.pep Sequence

Translation from 16 to 1612

> BO08387.pep
MWFVLYIFLALPLLLVAYLELSTFRRRRVLNKFNGPRGLPLMGNAHQMGK
NPSEILDTVFSWWHQYGKDNFVFWIGTYSNVLVTSSKYLEFILSSQTLIT
KSDIYQLTHPWLGLGLLTSTGSKWHKHRKMITPAFHFNILQDFHEVMNEN
STKFIKHLKTVAAGDNIFDFQEQAHYLTLDVICDTAMGVSINAMENRSSS
IVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYPAYSRTLKTLQDFTNEI
IAKRIEAHKSGAVSTNAGDEFTRKKMAFLDTLLSSTIDGRPLNSKELYEE
VSTFMFEGHDTTTSGVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDA
TFQEISQMKYLDLFIKEAQRVYPSVPFIGRFTEKDYVIDGDLVPKGTTLN
LGLVMLGYNEKVFKDPHKFRPERFELEKPGPFEYVPFSAGPRNCIGQKFA
LLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTIGLPDAERKKRDPYRH
KYDPILSAVLTLKSENGLYIRLKERHASFLDH

BO08387.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:37:34
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4e2-PB 526 CG2060-PB 1..526 1..526 2751 100 Plus
Cyp4e2-PA 526 CG2060-PA 1..526 1..526 2751 100 Plus
Cyp4e1-PA 531 CG2062-PA 1..525 1..525 2251 80.8 Plus
Cyp4e3-PA 526 CG4105-PA 1..526 1..527 1960 68.7 Plus
Cyp4d1-PA 512 CG3656-PA 1..479 1..467 925 41.5 Plus