Clone BO08391 Report

Search the DGRC for BO08391

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:83
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptMRG15-RA
Protein status:BO08391.pep: validated full length
Sequenced Size:1306

Clone Sequence Records

BO08391.3prime Sequence

876 bp (867 high quality bases) assembled on 2006-01-06

> BO08391.3prime
ATGGTCTAGAAAGCTTGCCTGTGCATTTCGCACGTACTCGGGATCAACGT
TGATAAAGTTGCTCATGCTGAAAAATATTGAGCTGTTCTTTACGAGGAAT
TTAAGGAAATCCTGCACGTGCGTGAGTAGGTTCTGCATGGACTGCTGATC
CAACGCAGAGTAGCTGAGCATTGAGCCAAGGCGGACAAACAGACGCAGCA
GGTGAAAAGATCCGTAAAGCTCGGACAACGGTGTGTCCGGATGCTTCTGC
ATCACATCCGCGTACTGGGTGCGTTCGAATTTGTACAGCAACTGGGAGCC
CAGCATTACATTGAAGTACTCTACAATTCCGTCGAGTACATCGTTTATGG
CAACCTCCTTGCTGGCACTGGTCGATTTCACGGACTTCTTGTGCGCCAAA
TACTGCTCAGAGATCTGCTGCACGGTAACCTTGGCGGGCAGCTCCAGCAG
TTTGTGCTCCCGCACCACCGCATACCAGTCGTCGGTCAGATAGTGCTTTA
ACTCGTCGGGTATCTTAATCTTGACCTCCACCTTAGCTGCGTAGGCCTCC
TCGCTTTCCACACACGGTGCCGGCTCCGTGGTGGGTGTGGATGGAGTGGT
AGTGGGCGGCAACGGCTTTTCTGCTACATCGCTTCCCGTAAGAGAAGGCC
GTTGTTCGCTCATTCTTTTCTTTTTCGGCGCCACCGGCCCCTCTTCCTCA
GTGGTCTCAGCTGCGGCGGGGTCTTCCTTTTTATCACTCGGCGTGCCAGG
TCTTGCTGTGGATGGCGTCGATTGTGTGGACTTTCGGTGGGCCCGGCTGG
TTGTAGAGTTGGCGGTGCTGTTAGTAGTCGTGGTGCCAGTGCTCCCGGCT
TCCGATTTGCTTCCCGGTCCGGCGCT

BO08391.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG6363-PA 1275 MRG15-RA 415..1272 876..19 4290 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-RB 1511 CG6363-RB 506..1363 876..19 4290 100 Minus
MRG15-RA 1496 CG6363-RA 491..1348 876..19 4290 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15276588..15277445 19..876 4290 100 Plus
Blast to na_te.dros performed on 2015-02-11 10:08:56 has no hits.

BO08391.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:46:00 Download gff for BO08391.3prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-PA 415..1275 15..876 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:40:13 Download gff for BO08391.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6363-PA 415..1275 15..876 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:03:56 Download gff for BO08391.3prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 491..1353 13..876 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:12:07 Download gff for BO08391.3prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 491..1353 13..876 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:12:07 Download gff for BO08391.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15276583..15277445 13..876 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:03:56 Download gff for BO08391.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11102305..11103167 13..876 99   Plus

BO08391.5prime Sequence

956 bp (770 high quality bases) assembled on 2006-01-06

> BO08391.5prime
GAAGTTATCAGTCGACATGGGAGAAGTAAAACCCGCTAAAGTGGAAAACT
ATAGCACGGGGACCGATGCAAACACTCTGTTCGTGGATGGGGAACGGGTT
CTGTGCTTCCACGGACCGCTCATCTACGAGGCCAAGGTTCTGAAAACAAA
ACCCGATGCGACGCCGGTTGAGTACTACATCCACTACGCGGGCTGGAGTA
AAAACTGGGACGAGTGGGTGCCCGAGAACCGAGTCCTCAAGTACAACGAT
GACAACGTCAAGCGACGTCAGGAACTGGCTCGCCAGTGCGGCGAGCGCTC
CAAGAAGGATAATAAGAAAGGCAGCGCCAAGGCCAAGAAAATGGAACAGA
TGCGGAACGAATCTCGTGCCTCGACGCCGTCTAAGGATAGCAACACCTCG
CAATCGACCGCTAGCAGCACACCAACAACTAGCGCCGGACCGGGAAGCAA
ATCGGAAGCCGGGAGCACTGGCACCACGACTACTAACAGCACCGCCAACT
CTACAACCAGCCGGGCCCACCGAAAGTCCACACAATCGACGCCATCCACA
GCAAGACCTGGCACGCCGAGTGATAAAAAGGAAGACCCCGCCGCAGCTGA
GACCACTGAGGAAGAGGGGCCGGTGGCGCCGAAAAAGAAAAGAATGAGCG
AACAACGGCCTTCTCTTACGGGAAGCGATGTAGCAGAAAAGCCGTTGCCG
CCCACTACCACTCCATCCACACCCACCACGGAGCCGGCACCGTGTGTGGA
AAGCGAGGAGGCCTACGCAGCTAAGGTGGAGGTCAAGATTAAGATACCCG
ACGAGTTAAAGCACTATCTGACCGACGACTGGTATGCGGTGGTGCGGGAG
CACAAACTGCTGGAGCTGCCCGCAAGGTTACCGTGCAGCAGATCTCTGAG
CAGTATTTGGCGCACAAGAAGTCCGTGAAATCGACCAGTGCCAGCAAGGA
GGTTGC

BO08391.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG6363-PA 1275 MRG15-RA 1..857 17..873 4285 100 Plus
CG6363-PA 1275 MRG15-RA 858..941 873..956 420 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:28:45
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-RA 1496 CG6363-RA 77..1017 17..956 4680 99.9 Plus
MRG15-RB 1511 CG6363-RB 77..1032 17..956 4520 98.3 Plus
l(3)neo43-RC 627 CG14865-RC 575..627 17..69 265 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:28:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15276919..15277557 956..319 3145 99.8 Minus
3R 32079331 3R 15277613..15277729 321..205 585 100 Minus
3R 32079331 3R 15277786..15277901 204..89 580 100 Minus
3R 32079331 3R 15277960..15278033 90..17 370 100 Minus
Blast to na_te.dros performed on 2015-02-11 14:28:44 has no hits.

BO08391.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:46:01 Download gff for BO08391.5prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-PA 1..941 17..956 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:40:15 Download gff for BO08391.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6363-PA 1..941 17..956 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:39:00 Download gff for BO08391.5prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1017 17..956 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:59:59 Download gff for BO08391.5prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1017 17..956 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:59:59 Download gff for BO08391.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15276919..15277555 321..956 99 <- Minus
3R 15277614..15277729 205..320 100 <- Minus
3R 15277786..15277900 90..204 100 <- Minus
3R 15277961..15278033 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:39:00 Download gff for BO08391.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11102641..11103277 321..956 99 <- Minus
arm_3R 11103336..11103451 205..320 100 <- Minus
arm_3R 11103508..11103622 90..204 100 <- Minus
arm_3R 11103683..11103755 17..89 100   Minus

BO08391.complete Sequence

1306 bp (1306 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ631174

> BO08391.complete
GAAGTTATCAGTCGACATGGGAGAAGTAAAACCCGCTAAAGTGGAAAACT
ATAGCACGGGGACCGATGCAAACACTCTGTTCGTGGATGGGGAACGGGTT
CTGTGCTTCCACGGACCGCTCATCTACGAGGCCAAGGTTCTGAAAACAAA
ACCCGATGCGACGCCGGTTGAGTACTACATCCACTACGCGGGCTGGAGTA
AAAACTGGGACGAGTGGGTGCCCGAGAACCGAGTCCTCAAGTACAACGAT
GACAACGTCAAGCGACGTCAGGAACTGGCTCGCCAGTGCGGCGAGCGCTC
CAAGAAGGATAATAAGAAAGGCAGCGCCAAGGCCAAGAAAATGGAACAGA
TGCGGAACGAATCTCGTGCCTCGACGCCGTCTAAGGATAGCAACACCTCG
CAATCGACCGCTAGCAGCACACCAACAACTAGCGCCGGACCGGGAAGCAA
ATCGGAAGCCGGGAGCACTGGCACCACGACTACTAACAGCACCGCCAACT
CTACAACCAGCCGGGCCCACCGAAAGTCCACACAATCGACGCCATCCACA
GCAAGACCTGGCACGCCGAGTGATAAAAAGGAAGACCCCGCCGCAGCTGA
GACCACTGAGGAAGAGGGGCCGGTGGCGCCGAAAAAGAAAAGAATGAGCG
AACAACGGCCTTCTCTTACGGGAAGCGATGTAGCAGAAAAGCCGTTGCCG
CCCACTACCACTCCATCCACACCCACCACGGAGCCGGCACCGTGTGTGGA
AAGCGAGGAGGCCTACGCAGCTAAGGTGGAGGTCAAGATTAAGATACCCG
ACGAGTTAAAGCACTATCTGACCGACGACTGGTATGCGGTGGTGCGGGAG
CACAAACTGCTGGAGCTGCCCGCCAAGGTTACCGTGCAGCAGATCTCTGA
GCAGTATTTGGCGCACAAGAAGTCCGTGAAATCGACCAGTGCCAGCAAGG
AGGTTGCCATAAACGATGTACTCGACGGAATTGTAGAGTACTTCAATGTA
ATGCTGGGCTCCCAGTTGCTGTACAAATTCGAACGCACCCAGTACGCGGA
TGTGATGCAGAAGCATCCGGACACACCGTTGTCCGAGCTTTACGGATCTT
TTCACCTGCTGCGTCTGTTTGTCCGCCTTGGCTCAATGCTCAGCTACTCT
GCGTTGGATCAGCAGTCCATGCAGAACCTACTCACGCACGTGCAGGATTT
CCTTAAATTCCTCGTAAAGAACAGCTCAATATTTTTCAGCATGAGCAACT
TTATCAACGTTGATCCCGAGTACGTGCGAAATGCACAGGCAAGCTTTCTA
GACCAT

BO08391.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-RA 1275 CG6363-PA 1..1272 17..1288 6360 100 Plus
MRG15-RB 1290 CG6363-PB 1..1287 17..1288 6175 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-RA 1496 CG6363-RA 77..1348 17..1288 6360 100 Plus
MRG15-RB 1511 CG6363-RB 77..1363 17..1288 6175 98.8 Plus
l(3)neo43-RC 627 CG14865-RC 575..627 17..69 265 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15276588..15277557 1288..319 4850 100 Minus
3R 32079331 3R 15277613..15277729 321..205 585 100 Minus
3R 32079331 3R 15277786..15277901 204..89 580 100 Minus
3R 32079331 3R 15277960..15278033 90..17 370 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:03:25 has no hits.

BO08391.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:10:09 Download gff for BO08391.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 1..1275 17..1292 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:30:29 Download gff for BO08391.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1353 17..1294 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:33 Download gff for BO08391.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1348 17..1290 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:10:10 Download gff for BO08391.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1353 17..1294 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:17:23 Download gff for BO08391.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1348 17..1290 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:17:23 Download gff for BO08391.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15277614..15277729 205..320 100 <- Minus
3R 15277786..15277900 90..204 100 <- Minus
3R 15277961..15278033 17..89 100   Minus
3R 15276586..15277555 321..1290 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:33 Download gff for BO08391.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11103336..11103451 205..320 100 <- Minus
arm_3R 11103508..11103622 90..204 100 <- Minus
arm_3R 11103683..11103755 17..89 100   Minus
arm_3R 11102308..11103277 321..1290 99 <- Minus

BO08391.pep Sequence

Translation from 16 to 1306

> BO08391.pep
MGEVKPAKVENYSTGTDANTLFVDGERVLCFHGPLIYEAKVLKTKPDATP
VEYYIHYAGWSKNWDEWVPENRVLKYNDDNVKRRQELARQCGERSKKDNK
KGSAKAKKMEQMRNESRASTPSKDSNTSQSTASSTPTTSAGPGSKSEAGS
TGTTTTNSTANSTTSRAHRKSTQSTPSTARPGTPSDKKEDPAAAETTEEE
GPVAPKKKRMSEQRPSLTGSDVAEKPLPPTTTPSTPTTEPAPCVESEEAY
AAKVEVKIKIPDELKHYLTDDWYAVVREHKLLELPAKVTVQQISEQYLAH
KKSVKSTSASKEVAINDVLDGIVEYFNVMLGSQLLYKFERTQYADVMQKH
PDTPLSELYGSFHLLRLFVRLGSMLSYSALDQQSMQNLLTHVQDFLKFLV
KNSSIFFSMSNFINVDPEYVRNAQASFLDH

BO08391.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:37:32
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-PA 424 CG6363-PA 1..424 1..424 2193 100 Plus
MRG15-PB 429 CG6363-PB 1..429 1..424 2177 98.8 Plus