Clone Sequence Records
BO08419.3prime Sequence
965 bp (847 high quality bases) assembled on 2006-01-06
> BO08419.3prime
ATGGTCTAGAAAGCTTGCCTCTAACTTAAAGCACTTGTTGACTATCGTCG
GGCTTACACATCGGGTAATTGGACGCTTCTTGCGCTTATTGCCAAAGAAA
GCTAACTCCCTTGCGGATTTTATAAGCTCCCAAGGTCCAGGTATGACCCT
GTTCACCCGTATGATGTCCGATCCGGAACAGTCGTTGCTGGGGACTTCTA
CGAGTCGATGAGGTTCTTTTACATATCTCGATATAGGATCCTTTTCAATG
ACATTTAAAACATACTCGTCGGTCAATTCCAGCCACTTTGGATCCTTTGA
GCGAATACTTAGTAGTTCTGGAGCAATACGTTGTACTACACTGACAAAAA
TAACATCCATGGCACAAGTTAGCGGATATTGATAGGCCTTTACGTGGAGC
AGCGATCGCGCCTCGAACAAGCGATATACCCGATGATAGTCAGCATAACG
ATACTCTATGCGTTGACCATCAGGTGATATGCGAGCCTGAAGAAATACAT
CATCAAAGTCCATTTCCGCAGAGCTGAGTATTTTCAGGCGCTTGTTATCA
CGCCGCAGATAATCCCATTTATCCACATCCAATCCGCAGCGACGATTATG
CACAATATCAAAGATGTAGGTATGTCCCAGCATGGGGAACGGCAGATTCT
CACTGGATCCCAATATCAAAGCCTTTATCAATTGAACACCTCGCCCGCCA
CCATCATCTCTCAAGGAGACTAGCTCCTGATTGAGGGCATCCTTAAAAAT
TTTATCCACACAGGCCATTGCGTTTTCCTCGTGATCAAATTCATGGTGGG
TCACCAACTCCCAGGCATGTGACATTGGTCCGTGACCAATGTCGTGAAGG
AGAGCGGCTATCTCCACCGCCTGACGACACCAATCCGGAAGCTTTGGCTC
GTAATGCGAATTACGTTCGATGGCCCTAAAGTGATCCTGCGCGCTTTTGT
AGGCTCCAAAGCAAT
BO08419.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:23:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9670-PA | 1263 | fal-RA | 314..1260 | 965..19 | 4685 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:49:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fal-RD | 2128 | CG9670-RD | 693..1639 | 965..19 | 4705 | 99.8 | Minus |
fal-RB | 1925 | CG9670-RB | 490..1436 | 965..19 | 4705 | 99.8 | Minus |
fal-RC | 2519 | CG9670-RC | 1084..2030 | 965..19 | 4705 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:49:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19297519..19298219 | 783..83 | 3505 | 100 | Minus |
3L | 28110227 | 3L | 19297276..19297448 | 956..784 | 850 | 99.4 | Minus |
3L | 28110227 | 3L | 19298277..19298341 | 83..19 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:49:16 has no hits.
BO08419.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:46:32 Download gff for
BO08419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-PA | 314..1263 | 18..965 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:41:02 Download gff for
BO08419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9670-PA | 314..1263 | 18..965 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:03:44 Download gff for
BO08419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-RC | 1084..2030 | 19..965 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:03:00 Download gff for
BO08419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-RC | 1084..2030 | 19..965 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:03:00 Download gff for
BO08419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19297269..19297448 | 784..965 | 97 | -> | Minus |
3L | 19297519..19298219 | 83..783 | 100 | -> | Minus |
3L | 19298278..19298341 | 19..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:03:44 Download gff for
BO08419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19290369..19290548 | 784..965 | 97 | -> | Minus |
arm_3L | 19290619..19291319 | 83..783 | 100 | -> | Minus |
arm_3L | 19291378..19291441 | 19..82 | 100 | | Minus |
BO08419.5prime Sequence
911 bp (864 high quality bases) assembled on 2006-01-06
> BO08419.5prime
GAAGTTATCAGTCGACATGTCAGCCAGCGCAGTGATTCACTCCCTCGCTC
AGCGACGGCGCTCTCTTTCTCTTCCCCTCTCCAACGAACCAAAGAACTCG
AAACTCCCGCTTTCCCAACAACAACTACAACAGCAGCAGCATGGACACCA
CGAACAACAACAACGCCCATCTATGCTTATTGAGGATGAGGTTCACGGTG
TAATCGAACTGTCGAGCCATATCCAAGAGATCGTCGAGCATCCACTCTTC
CAGCGCCTCAAACATGTCCACCAGTTGGGTCTCCTTCCGTGGGCCATCGA
TAAGAAGGCCGATCACAAGCGATACGATCATTGCCTTGGAGCCTACAAAA
GCGCGCAGGATCACCTTAGGGCCATCGAACGTAATTCGCATTACGAGCCA
AAGCTTCCGGATTGGTGTCGTCAGGCGGTGGAGATAGCCGCTCTCCTTCA
CGACATTGGTCACGGACCAATGTCACATGCCTGGGAGTTGGTGACCCACC
ATGAATTTGATCACGAGGAAAACGCAATGGCCTGTGTGGATAAAATTTTT
AAGGATGCCCTCAATCAGGAGCTAGTCTCCTTGAGAGATGATGGTGGCGG
GCGAGGTGTTCAATTGATAAAGGCTTTGATATTGGGATCCAGTGAGAATC
TGCCGTTCCCCATGCTGGGACATACCTACATCTTTGATATTGTGCATAAT
CGTCGCTGCGGATTGGATGTGGATAAATGGGATTATCTGCGGCGTGATAA
CAAGCGCCTGAAAATACTCAGCTCTGCGGAAATGGACTTTGATGATGTAT
TTCTTCAGGCTCGCATATCACCTGATGGTCAACGCATAGAGTATCGTTAT
GCTGACTATCATCGGGTATATCGCTTGTTCGAGGCGCGATCGCTGCTCCA
CGTAAAGGCCT
BO08419.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:23:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9670-PA | 1263 | fal-RA | 1..895 | 17..911 | 4475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 03:35:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fal-RD | 2128 | CG9670-RD | 380..1274 | 17..911 | 4475 | 100 | Plus |
fal-RB | 1925 | CG9670-RB | 177..1071 | 17..911 | 4475 | 100 | Plus |
fal-RC | 2519 | CG9670-RC | 927..1665 | 173..911 | 3695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 03:35:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19297519..19297918 | 512..911 | 2000 | 100 | Plus |
3L | 28110227 | 3L | 19297272..19297448 | 335..511 | 870 | 99.4 | Plus |
3L | 28110227 | 3L | 19297046..19297212 | 173..339 | 835 | 100 | Plus |
3L | 28110227 | 3L | 19294943..19295098 | 17..172 | 780 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 03:35:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2584..2666 | 81..163 | 172 | 67.5 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3275..3323 | 112..163 | 145 | 78.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6829 | 116..163 | 141 | 77.1 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 515..573 | 100..161 | 141 | 72.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2487..2541 | 116..170 | 140 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2385 | 87..164 | 138 | 64.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2430 | 116..164 | 137 | 75.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6831..6878 | 117..164 | 132 | 75 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2400 | 79..164 | 130 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2379 | 116..164 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2394..2442 | 116..164 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2484..2546 | 116..179 | 128 | 68.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6788 | 116..164 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6809 | 116..164 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6842 | 116..164 | 128 | 73.5 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 543..591 | 116..164 | 128 | 73.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1112..1160 | 116..164 | 128 | 73.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1110..1157 | 117..167 | 122 | 74.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2442..2490 | 116..164 | 119 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2880..2928 | 116..164 | 119 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1542..1589 | 116..163 | 114 | 70.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6767 | 117..164 | 114 | 70.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2343 | 128..164 | 113 | 78.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2793..2838 | 116..161 | 113 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2808..2853 | 116..164 | 112 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2358 | 116..164 | 110 | 69.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2778..2826 | 116..164 | 110 | 69.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6857..6905 | 116..164 | 110 | 69.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6890..6938 | 116..164 | 110 | 69.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1121..1171 | 116..169 | 110 | 70.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6437..6506 | 125..191 | 109 | 64.3 | Plus |
BO08419.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:46:34 Download gff for
BO08419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-PA | 1..895 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:41:03 Download gff for
BO08419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9670-PA | 1..895 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:44:51 Download gff for
BO08419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-RB | 175..1071 | 14..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:17:30 Download gff for
BO08419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-RB | 175..1071 | 14..911 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:17:30 Download gff for
BO08419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19294941..19295098 | 14..172 | 99 | -> | Plus |
3L | 19297046..19297212 | 173..339 | 100 | -> | Plus |
3L | 19297277..19297448 | 340..511 | 100 | -> | Plus |
3L | 19297519..19297918 | 512..911 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:44:51 Download gff for
BO08419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19288041..19288198 | 14..172 | 99 | -> | Plus |
arm_3L | 19290146..19290312 | 173..339 | 100 | -> | Plus |
arm_3L | 19290377..19290548 | 340..511 | 100 | -> | Plus |
arm_3L | 19290619..19291018 | 512..911 | 100 | | Plus |
BO08419.complete Sequence
1294 bp (1294 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ638658
> BO08419.complete
GAAGTTATCAGTCGACATGTCAGCCAGCGCAGTGATTCACTCCCTCGCTC
AGCGACGGCGCTCTCTTTCTCTTCCCCTCTCCAACGAACCAAAGAACTCG
AAACTCCCGCTTTCCCAACAACAACTACAACAGCAGCAGCATGGACACCA
CGAACAACAACAACGCCCATCTATGCTTATTGAGGATGAGGTTCACGGTG
TAATCGAACTGTCGAGCCATATCCAAGAGATCGTCGAGCATCCACTCTTC
CAGCGCCTCAAACATGTCCACCAGTTGGGTCTCCTTCCGTGGGCCATCGA
TAAGAAGGCCGATCACAAGCGATACGATCATTGCCTTGGAGCCTACAAAA
GCGCGCAGGATCACCTTAGGGCCATCGAACGTAATTCGCATTACGAGCCA
AAGCTTCCGGATTGGTGTCGTCAGGCGGTGGAGATAGCCGCTCTCCTTCA
CGACATTGGTCACGGACCAATGTCACATGCCTGGGAGTTGGTGACCCACC
ATGAATTTGATCACGAGGAAAACGCAATGGCCTGTGTGGATAAAATTTTT
AAGGATGCCCTCAATCAGGAGCTAGTCTCCTTGAGAGATGATGGTGGCGG
GCGAGGTGTTCAATTGATAAAGGCTTTGATATTGGGATCCAGTGAGAATC
TGCCGTTCCCCATGCTGGGACATACCTACATCTTTGATATTGTGCATAAT
CGTCGCTGCGGATTGGATGTGGATAAATGGGATTATCTGCGGCGTGATAA
CAAGCGCCTGAAAATACTCAGCTCTGCGGAAATGGACTTTGATGATGTAT
TTCTTCAGGCTCGCATATCACCTGATGGTCAACGCATAGAGTATCGTTAT
GCTGACTATCATCGGGTATATCGCTTGTTCGAGGCGCGATCGCTGCTCCA
CGTAAAGGCCTATCAATATCCGCTAACTTGTGCCATGGATGTTATTTTTG
TCAGTGTAGTACAACGTATTGCTCCAGAACTACTAAGTATTCGCTCAAAG
GATCCAAAGTGGCTGGAATTGACCGACGAGTATGTTTTAAATGTCATTGA
AAAGGATCCTATATCGAGATATGTAAAAGAACCTCATCGACTCGTAGAAG
TCCCCAGCAACGACTGTTCCGGATCGGACATCATACGGGTGAACAGGGTC
ATACCTGGACCTTGGGAGCTTATAAAATCCGCAAGGGAGTTAGCTTTCTT
TGGCAATAAGCGCAAGAAGCGTCCAATTACCCGATGTGTAAGCCCGACGA
TAGTCAACAAGTGCTTTAAGTTAGAGGCAAGCTTTCTAGACCAT
BO08419.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:10:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fal-RD | 1107 | CG9670-PD | 1..1104 | 173..1276 | 5520 | 100 | Plus |
fal-RB | 1107 | CG9670-PB | 1..1104 | 173..1276 | 5520 | 100 | Plus |
fal-RC | 1107 | CG9670-PC | 1..1104 | 173..1276 | 5520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:10:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fal-RD | 2128 | CG9670-RD | 380..1639 | 17..1276 | 6300 | 100 | Plus |
fal-RB | 1925 | CG9670-RB | 177..1436 | 17..1276 | 6300 | 100 | Plus |
fal-RC | 2519 | CG9670-RC | 927..2030 | 173..1276 | 5520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:10:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19297519..19298219 | 512..1212 | 3505 | 100 | Plus |
3L | 28110227 | 3L | 19297272..19297448 | 335..511 | 870 | 99.4 | Plus |
3L | 28110227 | 3L | 19297046..19297212 | 173..339 | 835 | 100 | Plus |
3L | 28110227 | 3L | 19294943..19295098 | 17..172 | 780 | 100 | Plus |
3L | 28110227 | 3L | 19298277..19298341 | 1212..1276 | 325 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:10:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2584..2666 | 81..163 | 172 | 67.5 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3275..3323 | 112..163 | 145 | 78.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6829 | 116..163 | 141 | 77.1 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 515..573 | 100..161 | 141 | 72.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2487..2541 | 116..170 | 140 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2385 | 87..164 | 138 | 64.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2430 | 116..164 | 137 | 75.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6831..6878 | 117..164 | 132 | 75 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2400 | 79..164 | 130 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2379 | 116..164 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2394..2442 | 116..164 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2484..2546 | 116..179 | 128 | 68.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6788 | 116..164 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6809 | 116..164 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6842 | 116..164 | 128 | 73.5 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 543..591 | 116..164 | 128 | 73.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1112..1160 | 116..164 | 128 | 73.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1110..1157 | 117..167 | 122 | 74.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2442..2490 | 116..164 | 119 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2880..2928 | 116..164 | 119 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1542..1589 | 116..163 | 114 | 70.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6767 | 117..164 | 114 | 70.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2343 | 128..164 | 113 | 78.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2793..2838 | 116..161 | 113 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2808..2853 | 116..164 | 112 | 73.5 | Plus |
BO08419.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:30 Download gff for
BO08419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-RA | 1..1263 | 17..1277 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:33:31 Download gff for
BO08419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-RB | 173..1434 | 14..1276 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:00 Download gff for
BO08419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-RB | 177..1436 | 17..1278 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:31 Download gff for
BO08419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-RB | 173..1434 | 14..1276 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:49 Download gff for
BO08419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fal-RB | 177..1436 | 17..1278 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:49 Download gff for
BO08419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19294943..19295098 | 17..172 | 100 | -> | Plus |
3L | 19297046..19297212 | 173..339 | 100 | -> | Plus |
3L | 19297277..19297448 | 340..511 | 100 | -> | Plus |
3L | 19297519..19298219 | 512..1212 | 100 | -> | Plus |
3L | 19298278..19298341 | 1213..1278 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:00 Download gff for
BO08419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19288043..19288198 | 17..172 | 100 | -> | Plus |
arm_3L | 19290146..19290312 | 173..339 | 100 | -> | Plus |
arm_3L | 19290377..19290548 | 340..511 | 100 | -> | Plus |
arm_3L | 19290619..19291319 | 512..1212 | 100 | -> | Plus |
arm_3L | 19291378..19291441 | 1213..1278 | 96 | | Plus |
BO08419.pep Sequence
Translation from 16 to 1294
> BO08419.pep
MSASAVIHSLAQRRRSLSLPLSNEPKNSKLPLSQQQLQQQQHGHHEQQQR
PSMLIEDEVHGVIELSSHIQEIVEHPLFQRLKHVHQLGLLPWAIDKKADH
KRYDHCLGAYKSAQDHLRAIERNSHYEPKLPDWCRQAVEIAALLHDIGHG
PMSHAWELVTHHEFDHEENAMACVDKIFKDALNQELVSLRDDGGGRGVQL
IKALILGSSENLPFPMLGHTYIFDIVHNRRCGLDVDKWDYLRRDNKRLKI
LSSAEMDFDDVFLQARISPDGQRIEYRYADYHRVYRLFEARSLLHVKAYQ
YPLTCAMDVIFVSVVQRIAPELLSIRSKDPKWLELTDEYVLNVIEKDPIS
RYVKEPHRLVEVPSNDCSGSDIIRVNRVIPGPWELIKSARELAFFGNKRK
KRPITRCVSPTIVNKCFKLEASFLDH
BO08419.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:54:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fal-PD | 368 | CG9670-PD | 1..368 | 53..420 | 1961 | 100 | Plus |
fal-PB | 368 | CG9670-PB | 1..368 | 53..420 | 1961 | 100 | Plus |
fal-PC | 368 | CG9670-PC | 1..368 | 53..420 | 1961 | 100 | Plus |