Clone BO08432 Report

Search the DGRC for BO08432

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:84
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG4407-RA
Protein status:BO08432.pep: validated full length
Sequenced Size:1000

Clone Sequence Records

BO08432.3prime Sequence

892 bp (873 high quality bases) assembled on 2006-01-06

> BO08432.3prime
ATGGTCTAGAAAGCTTGCCTTCCTGGGCAGGCGACCAGCACGCTCCATGG
TGGCATCCTGGAGCTCCCAGGCGGGCCGATAGCCACCCAGATCGCAGGAG
CAGACGGCATCGGAATTAGAACCACATTCACACTCGGCATCGGTGCGTCG
GAGGTGCGGATTAGGCACTGTGTTCGCACGATTCCCGATCGAGGTGTAGC
CCCGATCGTACAGGCTGCAATAGGGCACCGAGTTCAAGTGGATGTAGTGC
CAGACGTCGTGGTAGCTCCACTCCAGCAGCGGATTCAGGCGCATCATCGG
CGGCCAGTCGTTGTCCGTGGGCTGCATGGGCGCCAGATGCTGGCAGTAGG
GATCCGTGTTGCGGCTGCCCACGAAGACGGCCTTGATCCGCGGCATGTCC
GACGACATGTGGGTGAGTGCCTCCTTGAGCGTACCCTCGTACTGAACCAA
CTGGACGCGGTAGTTGCGTACGCAACGCTCGACGAACTCATCGATTTCCG
GAAACGAATCGCCGGATTTAATGTACAGCATGGGAATGTCGCCGCTGGAG
ATGTTCTCCTGGCGCAGGTAACGCATAAGGAGATCGAGCAGCACGGTGCA
ATCCTTGCCGCCGTTGAAACAGAAAATTAGCTCCTCGACGCCGTAGATTT
GCAGGGTTTCGGCGAAGAAGGCGAACGCTTTATTTTGCCGCTCCTCAATG
GCCAGTCGATCCTCGGCTGTTAGTTCCATTGGATTTGATATATCCTGTCC
CTTTGCCACATCCTTGGAGTTCTCCGAACGATCCGACATGCTCCGTTTCT
CTAGAAACAAATGCTTTTTGCTAATGCTCTTTGCGCATAGAATGCTGTTG
TTCGCTGTAATGTTTGTGATGTTTGTGATGTTCTTCCGGCAT

BO08432.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG4407-PA 969 CG4407-RA 93..966 892..19 4370 100 Minus
CG4407-PB 885 CG4407-RB 9..882 892..19 4370 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG4407-RB 1235 CG4407-RB 166..1039 892..19 4370 100 Minus
CG4407-RA 1338 CG4407-RA 269..1142 892..19 4370 100 Minus
CG16848-RA 1198 CG16848-RA 550..670 314..194 185 76.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:50:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12902316..12902886 322..892 2855 100 Plus
X 23542271 X 12901549..12901853 19..323 1525 100 Plus
2L 23513712 2L 13413068..13413188 314..194 185 76.9 Minus
Blast to na_te.dros performed on 2015-02-10 16:50:05 has no hits.

BO08432.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:46:55 Download gff for BO08432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4407-PB 9..885 18..892 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:41:31 Download gff for BO08432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4407-PB 9..885 18..892 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:25:27 Download gff for BO08432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4407-RA 269..1149 11..892 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:01:23 Download gff for BO08432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4407-RA 269..1149 11..892 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:01:23 Download gff for BO08432.3prime
Subject Subject Range Query Range Percent Splice Strand
X 12901542..12901851 11..321 98 <- Plus
X 12902316..12902886 322..892 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:25:27 Download gff for BO08432.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 12795575..12795884 11..321 98 <- Plus
arm_X 12796349..12796919 322..892 100   Plus

BO08432.5prime Sequence

888 bp (815 high quality bases) assembled on 2006-01-06

> BO08432.5prime
GAAGTTATCAGTCGACATGAGCTATTGGCGTGTGACGTCATCGTTTTTGC
TAGCCAGGGCACGGCCACGCCTCCCACAAACATTACGCCCACTGAGCACC
ATGAACGAATGCCGGAAGAACATCACAAACATCACAAACATTACAGCGAA
CAACAGCATTCTATGCGCAAAGAGCATTAGCAAAAAGCATTTGTTTCTAG
AGAAACGGAGCATGTCGGATCGTTCGGAGAACTCCAAGGATGTGGCAAAG
GGACAGGATATATCAAATCCAATGGAACTAACAGCCGAGGATCGACTGGC
CATTGAGGAGCGGCAAAATAAAGCGTTCGCCTTCTTCGCCGAAACCCTGC
AAATCTACGGCGTCGAGGAGCTAATTTTCTGTTTCAACGGCGGCAAGGAT
TGCACCGTGCTGCTCGATCTCCTTATGCGTTACCTGCGCCAGGAGAACAT
CTCCAGCGGCGACATTCCCATGCTGTACATTAAATCCGGCGATTCGTTTC
CGGAAATCGATGAGTTCGTCGAGCGTTGCGTACGCAACTACCGCGTCCAG
TTGGTTCAGTACGAGGGTACGCTCAAGGAGGCACTCACCCACATGTCGTC
GGACATGCCGCGGATCAAGGCCGTCTTCGTGGGCAGCCGCAACACGGATC
CCTACTGCCAGCATCTGGCGCCCATGCAGCCCACGGACAACGACTGGCCG
CCGATGATGCGCCTGAATCCGCTGCTGGAGTGGAGCTACCACGACGTCTG
GCACTACATCCACTTGAACTCGGTGCCCTATTGCAGCCTGTACGATCGGG
GCTACACCTCGATCGGGAATCGTGCGAACACAGTGCCTAATCCGCACCTC
CGACGCACCGATGCCGAGTGTGAATGTGGTTCTAATTC

BO08432.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:24:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG4407-PA 969 CG4407-RA 1..872 17..888 4360 100 Plus
CG4407-PB 885 CG4407-RB 1..788 101..888 3940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:14:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG4407-RA 1338 CG4407-RA 175..1048 15..888 4370 100 Plus
CG4407-RB 1235 CG4407-RB 86..945 29..888 4300 100 Plus
CG16848-RA 1198 CG16848-RA 550..670 687..807 185 76.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:14:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12902316..12902967 679..28 3260 100 Minus
X 23542271 X 12901643..12901853 888..678 1055 100 Minus
2L 23513712 2L 13413068..13413188 687..807 185 76.9 Plus
Blast to na_te.dros performed on 2015-02-10 20:14:40 has no hits.

BO08432.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:46:56 Download gff for BO08432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4407-PA 1..872 17..888 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:41:33 Download gff for BO08432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4407-PA 1..872 17..888 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:30:33 Download gff for BO08432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4407-RA 175..1048 15..888 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:59:01 Download gff for BO08432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4407-RA 175..1048 15..888 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:59:01 Download gff for BO08432.5prime
Subject Subject Range Query Range Percent Splice Strand
X 12901643..12901851 680..888 100 <- Minus
X 12902316..12902966 29..679 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:30:33 Download gff for BO08432.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 12795676..12795884 680..888 100 <- Minus
arm_X 12796349..12796999 29..679 100 <- Minus

BO08432.complete Sequence

1000 bp (1000 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631190

> BO08432.complete
GAAGTTATCAGTCGACATGAGCTATTGGCGTGTGACGTCATCGTTTTTGC
TAGCCAGGGCACGGCCACGCCTCCCACAAACATTACGCCCACTGAGCACC
ATGAACGAATGCCGGAAGAACATCACAAACATCACAAACATTACAGCGAA
CAACAGCATTCTATGCGCAAAGAGCATTAGCAAAAAGCATTTGTTTCTAG
AGAAACGGAGCATGTCGGATCGTTCGGAGAACTCCAAGGATGTGGCAAAG
GGACAGGATATATCAAATCCAATGGAACTAACAGCCGAGGATCGACTGGC
CATTGAGGAGCGGCAAAATAAAGCGTTCGCCTTCTTCGCCGAAACCCTGC
AAATCTACGGCGTCGAGGAGCTAATTTTCTGTTTCAACGGCGGCAAGGAT
TGCACCGTGCTGCTCGATCTCCTTATGCGTTACCTGCGCCAGGAGAACAT
CTCCAGCGGCGACATTCCCATGCTGTACATTAAATCCGGCGATTCGTTTC
CGGAAATCGATGAGTTCGTCGAGCGTTGCGTACGCAACTACCGCGTCCAG
TTGGTTCAGTACGAGGGTACGCTCAAGGAGGCACTCACCCACATGTCGTC
GGACATGCCGCGGATCAAGGCCGTCTTCGTGGGCAGCCGCAACACGGATC
CCTACTGCCAGCATCTGGCGCCCATGCAGCCCACGGACAACGACTGGCCG
CCGATGATGCGCCTGAATCCGCTGCTGGAGTGGAGCTACCACGACGTCTG
GCACTACATCCACTTGAACTCGGTGCCCTATTGCAGCCTGTACGATCGGG
GCTACACCTCGATCGGGAATCGTGCGAACACAGTGCCTAATCCGCACCTC
CGACGCACCGATGCCGAGTGTGAATGTGGTTCTAATTCCGATGCCGTCTG
CTCCTGCGATCTGGGTGGCTATCGGCCCGCCTGGGAGCTCCAGGATGCCA
CCATGGAGCGTGCTGGTCGCCTGCCCAGGAAGGCAAGCTTTCTAGACCAT

BO08432.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:10:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG4407-RA 969 CG4407-PA 1..966 17..982 4830 100 Plus
CG4407-RB 885 CG4407-PB 1..882 101..982 4410 100 Plus
CG16848-RA 765 CG16848-PA 476..596 687..807 185 76.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:10:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG4407-RA 1338 CG4407-RA 175..1142 15..982 4840 100 Plus
CG4407-RB 1235 CG4407-RB 86..1039 29..982 4770 100 Plus
CG16848-RA 1198 CG16848-RA 550..670 687..807 185 76.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:10:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12902316..12902967 679..28 3260 100 Minus
X 23542271 X 12901549..12901853 982..678 1525 100 Minus
2L 23513712 2L 13413068..13413188 687..807 185 76.9 Plus
Blast to na_te.dros performed on 2014-11-27 10:10:30 has no hits.

BO08432.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:08 Download gff for BO08432.complete
Subject Subject Range Query Range Percent Splice Strand
CG4407-RA 1..969 17..983 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:33:02 Download gff for BO08432.complete
Subject Subject Range Query Range Percent Splice Strand
CG4407-RA 142..1116 15..990 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:05:38 Download gff for BO08432.complete
Subject Subject Range Query Range Percent Splice Strand
CG4407-RA 177..1142 17..984 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:08 Download gff for BO08432.complete
Subject Subject Range Query Range Percent Splice Strand
CG4407-RA 142..1116 15..990 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:14:52 Download gff for BO08432.complete
Subject Subject Range Query Range Percent Splice Strand
CG4407-RA 177..1142 17..984 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:14:52 Download gff for BO08432.complete
Subject Subject Range Query Range Percent Splice Strand
X 12901547..12901851 680..984 99 <- Minus
X 12902316..12902972 23..679 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:05:38 Download gff for BO08432.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12795580..12795884 680..984 99 <- Minus
arm_X 12796349..12797005 23..679 99   Minus

BO08432.pep Sequence

Translation from 16 to 1000

> BO08432.pep
MSYWRVTSSFLLARARPRLPQTLRPLSTMNECRKNITNITNITANNSILC
AKSISKKHLFLEKRSMSDRSENSKDVAKGQDISNPMELTAEDRLAIEERQ
NKAFAFFAETLQIYGVEELIFCFNGGKDCTVLLDLLMRYLRQENISSGDI
PMLYIKSGDSFPEIDEFVERCVRNYRVQLVQYEGTLKEALTHMSSDMPRI
KAVFVGSRNTDPYCQHLAPMQPTDNDWPPMMRLNPLLEWSYHDVWHYIHL
NSVPYCSLYDRGYTSIGNRANTVPNPHLRRTDAECECGSNSDAVCSCDLG
GYRPAWELQDATMERAGRLPRKASFLDH

BO08432.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG4407-PA 322 CG4407-PA 1..322 1..322 1724 100 Plus
CG4407-PB 294 CG4407-PB 1..294 29..322 1581 100 Plus
CG16848-PA 254 CG16848-PA 50..241 111..318 471 43.3 Plus