Clone BO08465 Report

Search the DGRC for BO08465

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:84
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG14613-RA
Protein status:BO08465.pep: validated full length
Sequenced Size:757

Clone Sequence Records

BO08465.3prime Sequence

755 bp (754 high quality bases) assembled on 2006-01-06

> BO08465.3prime
ATGGTCTAGAAAGCTTGCTTCTCTCTCGTCCTTCTCTGCCTTGTCCGCCT
TAGCGCTTGCCCGGGTGGCCTTCTTGTCCTCGTACATCTTTATTAGCTCG
CTTTTTGTGGGCATGGGCTTAATGTAGCCGTGTTGCACCAGGTACTTAAT
GGATACGGTTGTACACCCCAAAGTAAGGGCGTAGCGCAGGGGCGTGGCCA
CTTTATAGCACAGATAGGCGATGGCGTAGTGCCCCATATCCGAGCCCTGC
ACCTTCTCAATGATGTTCTCGCTCAAGTGGATGTACTGCAGCAAAGCGGG
CACATCGACGCCACTCTTTGACAGGTAGTAGAAGCCTCCAAACCAGCCCA
CTGACGTGAGCACGTGCACCGGGATGAGCACGTACCAGTACTGTTTGTAC
ATGTGCTTGAACTTGGCGAACAAACCCATGTTTGCCGCCTCGCCAAAGAG
TTCGCTGGAGGTGGTGCTGTTGGTGGCCTTCAAATCCTTGCCGCCGGCTG
ACGAGTTGTTAATGGCGGGCGCTGGTGCAGCCGCCGCCGGGTTCGCCGAC
TTGTGGTTGAAGCGGATGTTGACGGTGGGCAGGAGCAGGTTACGGCGATT
CGCGAGAGGCCAGGAATCACTAGCCAGACTTGTTGGACTAGTCTCGGACA
TCGTCGACAGGCACCTTGAGTGGGCGCCACCGAACAGCCGCAAGGAGCAG
GCAAGCAATCGCTGGCGCGACAGAAAGACCACTGTTGCCATGTCGACTGA
TAACT

BO08465.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:24:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14613-PA 726 CG14613-RA 1..723 741..19 3615 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 17:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14613-RB 1755 CG14613-RB 246..968 741..19 3615 100 Minus
CG14613-RA 1539 CG14613-RA 246..968 741..19 3615 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 17:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22471349..22471776 314..741 2140 100 Plus
X 23542271 X 22470830..22470979 19..168 750 100 Plus
X 23542271 X 22471141..22471289 167..315 745 100 Plus
Blast to na_te.dros performed on 2015-02-02 17:41:13 has no hits.

BO08465.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:47:53 Download gff for BO08465.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14613-PA 1..726 16..741 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:42:54 Download gff for BO08465.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14613-PA 1..726 16..741 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 17:43:42 Download gff for BO08465.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14613-RA 240..968 19..746 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:55:14 Download gff for BO08465.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14613-RA 240..968 19..746 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:55:14 Download gff for BO08465.3prime
Subject Subject Range Query Range Percent Splice Strand
X 22470830..22470978 19..167 100 <- Plus
X 22471142..22471287 168..313 100 <- Plus
X 22471349..22471782 314..746 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 17:43:42 Download gff for BO08465.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21872666..21872814 19..167 100 <- Plus
arm_X 21872978..21873123 168..313 100 <- Plus
arm_X 21873185..21873618 314..746 99   Plus

BO08465.5prime Sequence

755 bp (728 high quality bases) assembled on 2006-01-06

> BO08465.5prime
GAAGTTATCAGTCGACATGGCAACAGTGGTCTTTCTGTCGCGCCAGCGAT
TGCTTGCCTGCTCCTTGCGGCTGTTCGGTGGCGCCCACTCAAGGTGCCTG
TCGACGATGTCCGAGACTAGTCCAACAAGTCTGGCTAGTGATTCCTGGCC
TCTCGCGAATCGCCGTAACCTGCTCCTGCCCACCGTCAACATCCGCTTCA
ACCACAAGTCGGCGAACCCGGCGGCGGCTGCACCAGCGCCCGCCATTAAC
AACTCGTCAGCCGGCGGCAAGGATTTGAAGGCCACCAACAGCACCACCTC
CAGCGAACTCTTTGGCGAGGCGGCAAACATGGGTTTGTTCGCCAAGTTCA
AGCACATGTACAAACAGTACTGGTACGTGCTCATCCCGGTGCACGTGCTC
ACGTCAGTGGGCTGGTTTGGAGGCTTCTACTACCTGTCAAAGAGTGGCGT
CGATGTGCCCGCTTTGCTGCAGTACATCCACTTGAGCGAGAACATCATTG
AGAAGGTGCAGGGCTCGGATATGGGGCACTACGCCATCGCCTATCTGTGC
TATAAAGTGGCCACGCCCCTGCGCTACGCCCTTACTTTGGGGTGTACAAC
CGTATCCATTAAGTACCTGGTGCAACACGGCTACATTAAGCCCATGCCCA
CAAAAAGCGAGCTAATAAAGATGTACGAGGACAAGAAGGCCACCCGGGCA
AGCGCTAAGGCGGACAAGGCAGAGAAGGACGAGAGAGAAGCAAGCTTTCT
AGACC

BO08465.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:24:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14613-PA 726 CG14613-RA 1..723 17..739 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14613-RB 1755 CG14613-RB 246..968 17..739 3615 100 Plus
CG14613-RA 1539 CG14613-RA 246..968 17..739 3615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:14:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22471349..22471776 444..17 2140 100 Minus
X 23542271 X 22470830..22470979 739..590 750 100 Minus
X 23542271 X 22471141..22471289 591..443 745 100 Minus
Blast to na_te.dros performed on 2015-02-10 20:14:01 has no hits.

BO08465.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:47:55 Download gff for BO08465.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14613-PA 1..726 17..742 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:42:55 Download gff for BO08465.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14613-PA 1..726 17..742 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:30:22 Download gff for BO08465.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14613-RA 240..968 12..739 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:57:35 Download gff for BO08465.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14613-RA 240..968 12..739 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:57:35 Download gff for BO08465.5prime
Subject Subject Range Query Range Percent Splice Strand
X 22470830..22470978 591..739 100 <- Minus
X 22471142..22471287 445..590 100 <- Minus
X 22471349..22471782 12..444 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:30:22 Download gff for BO08465.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21872978..21873123 445..590 100 <- Minus
arm_X 21872666..21872814 591..739 100 <- Minus
arm_X 21873185..21873618 12..444 99   Minus

BO08465.complete Sequence

757 bp (757 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631207

> BO08465.complete
GAAGTTATCAGTCGACATGGCAACAGTGGTCTTTCTGTCGCGCCAGCGAT
TGCTTGCCTGCTCCTTGCGGCTGTTCGGTGGCGCCCACTCAAGGTGCCTG
TCGACGATGTCCGAGACTAGTCCAACAAGTCTGGCTAGTGATTCCTGGCC
TCTCGCGAATCGCCGTAACCTGCTCCTGCCCACCGTCAACATCCGCTTCA
ACCACAAGTCGGCGAACCCGGCGGCGGCTGCACCAGCGCCCGCCATTAAC
AACTCGTCAGCCGGCGGCAAGGATTTGAAGGCCACCAACAGCACCACCTC
CAGCGAACTCTTTGGCGAGGCGGCAAACATGGGTTTGTTCGCCAAGTTCA
AGCACATGTACAAACAGTACTGGTACGTGCTCATCCCGGTGCACGTGCTC
ACGTCAGTGGGCTGGTTTGGAGGCTTCTACTACCTGTCAAAGAGTGGCGT
CGATGTGCCCGCTTTGCTGCAGTACATCCACTTGAGCGAGAACATCATTG
AGAAGGTGCAGGGCTCGGATATGGGGCACTACGCCATCGCCTATCTGTGC
TATAAAGTGGCCACGCCCCTGCGCTACGCCCTTACTTTGGGGTGTACAAC
CGTATCCATTAAGTACCTGGTGCAACACGGCTACATTAAGCCCATGCCCA
CAAAAAGCGAGCTAATAAAGATGTACGAGGACAAGAAGGCCACCCGGGCA
AGCGCTAAGGCGGACAAGGCAGAGAAGGACGAGAGAGAAGCAAGCTTTCT
AGACCAT

BO08465.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG14613-RB 726 CG14613-PB 1..723 17..739 3615 100 Plus
CG14613-RA 726 CG14613-PA 1..723 17..739 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG14613-RB 1755 CG14613-RB 246..968 17..739 3615 100 Plus
CG14613-RA 1539 CG14613-RA 246..968 17..739 3615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:46:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22471349..22471776 444..17 2140 100 Minus
X 23542271 X 22470830..22470979 739..590 750 100 Minus
X 23542271 X 22471141..22471289 591..443 745 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:46:43 has no hits.

BO08465.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:03 Download gff for BO08465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14613-RA 1..726 17..742 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:04:35 Download gff for BO08465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14613-RA 194..922 12..739 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:13 Download gff for BO08465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14613-RA 246..968 17..741 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:03 Download gff for BO08465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14613-RA 194..922 12..739 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:52:36 Download gff for BO08465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14613-RA 246..968 17..741 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:52:36 Download gff for BO08465.complete
Subject Subject Range Query Range Percent Splice Strand
X 22471349..22471776 17..444 100   Minus
X 22470827..22470978 591..741 98 <- Minus
X 22471142..22471287 445..590 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:13 Download gff for BO08465.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21872978..21873123 445..590 100 <- Minus
arm_X 21872663..21872814 591..741 98 <- Minus
arm_X 21873185..21873612 17..444 100   Minus

BO08465.pep Sequence

Translation from 16 to 757

> BO08465.pep
MATVVFLSRQRLLACSLRLFGGAHSRCLSTMSETSPTSLASDSWPLANRR
NLLLPTVNIRFNHKSANPAAAAPAPAINNSSAGGKDLKATNSTTSSELFG
EAANMGLFAKFKHMYKQYWYVLIPVHVLTSVGWFGGFYYLSKSGVDVPAL
LQYIHLSENIIEKVQGSDMGHYAIAYLCYKVATPLRYALTLGCTTVSIKY
LVQHGYIKPMPTKSELIKMYEDKKATRASAKADKAEKDEREASFLDH

BO08465.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:13:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14613-PB 241 CG14613-PB 1..241 1..241 1248 100 Plus
CG14613-PA 241 CG14613-PA 1..241 1..241 1248 100 Plus
CG15403-PA 200 CG15403-PA 78..200 91..212 161 31.2 Plus