Clone Sequence Records
BO08468.3prime Sequence
963 bp (804 high quality bases) assembled on 2006-01-06
> BO08468.3prime
ATGGTCTAGAAAGCTTGCCGACAGCGCCACCTCCAGACACATCATGATCA
GGAAGCCGGATACAGTGCCCCACGTGGCGATCGTTCCATTTCCGCTGGCA
TGAGCCTCCGGCAGAATGTCGTCCGACACAATGTATATCATGGCTCCGGC
CGCAAAAGACAAGGCGTATGGCAGGATCAGGTTGGCAAAGGTCACCGCCA
CGGCGCCCAGAACTCCAAAAATGGGCTCCACCATTCCGGACAGCTGTCCG
TACCACAGAGCCCGCTTCACGCTGAATCCTGCGGCATGCAGTGGCAAGCT
GACAGCCAATCCCTCGGGGAAGTTTTGAATGCCAATGCCAATGGCCAAAT
TGCGGGCGCTCTCAAATGTCGATGAGTTCGTGGAGCCAATGGCACCAAAG
CTTACGCCCACAGCCAGCCCTTCTGGAATGTTGTGGACCGTGATGGCCAC
GACCAAAAGCATAATCCTCTTCCACTGGGACAGGGCGTCCTCGGCGCGCT
GCTGCTCCTCAGGCGTGGTGTAGGTGCACTGCTCCATCTCGTTGATGCTA
GCTCCCTTCTTTCGGCGTCTCGATTCGCCGCTGTGCTGCACGCTAAGGCA
GTCGGAGAAGCTGTCCAGACTCTTTGAGGCCAACCTATCGGGGGCAACTC
CATTGCGCTTAGAGTCCTCGATGGCTATGTCCGCCTTGGCTTTTGATTGC
GTCATCTGGATCATCATGTTGGTGCTGTTAAGGCCCAGGTATGACATCAA
TTTGTCGCATCCGTAGACGAAGATCGATCCCAAGAGGAAGCCTCCAGCGA
CGGGCAGAAAGGCGTATACTCCGTACAAATGGGAACTCTCGGCCATTTCG
ATGGCCGGCTTGAGGAGTGACCAAAGGAGGCTGCTATCATTACGCCAGCT
GCGAATCCCAGGGCGCGTCCAGAGACCTCGGCTGGTTACCCCGGACGAAG
ATCACTAGGGCGG
BO08468.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13189-PA | 1026 | CG13189-RA | 167..1023 | 875..19 | 4285 | 100 | Minus |
| CG13189-PA | 1026 | CG13189-RA | 77..125 | 963..915 | 220 | 97.9 | Minus |
| CG13189-PA | 1026 | CG13189-RA | 126..168 | 915..873 | 215 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:51:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip48C-RA | 1878 | CG13189-RA | 522..1468 | 963..19 | 4670 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:51:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11900038..11900984 | 963..19 | 4620 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:51:02 has no hits.
BO08468.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:47:59 Download gff for
BO08468.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-PA | 77..1026 | 16..963 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:43:01 Download gff for
BO08468.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-PA | 77..1026 | 16..963 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:04:29 Download gff for
BO08468.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-RA | 522..1468 | 19..963 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:07:24 Download gff for
BO08468.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zip48C-RA | 522..1468 | 19..963 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:07:24 Download gff for
BO08468.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11900038..11900984 | 19..963 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:04:29 Download gff for
BO08468.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7787543..7788489 | 19..963 | 99 | | Minus |
BO08468.5prime Sequence
856 bp (839 high quality bases) assembled on 2006-01-06
> BO08468.5prime
GAAGTTATCAGTCGACATGATTCCAGGCTATGGACCCGTCACGCAGGCTC
TGCTGGGCACCCTGCTTACCTGGGGACTGACCGCCGCTGGCGCCGCCCTA
GTGATCTTCGTCCGGGGTAACCAGCGGAGGTCTCTGGACGCCGCCCTGGG
ATTCGCAGCTGGCGTAATGATAGCAGCCTCCTTTTGGTCACTCCTCAAGC
CGGCCATCGAAATGGCCGAGAGTTCCCATTTGTACGGAGTATACGCCTTT
CTGCCCGTCGCTGGAGGCTTCCTCTTGGGATCGATCTTCGTCTACGGATG
CGACAAATTGATGTCATACCTGGGCCTTAACAGCACCAACATGATGATCC
AGATGACGCAATCAAAAGCCAAGGCGGACATAGCCATCGAGGACTCTAAG
CGCAATGGAGTTGCCCCCGATAGGTTGGCCTCAAAGAGTCTGGACAGCTT
CTCCGACTGCCTTAGCGTGCAGCACAGCGGCGAATCGAGACGCCGAAAGA
AGGGAGCTAGCATCAACGAGATGGAGCAGTGCACCTACACCACGCCTGAG
GAGCAGCAGCGCGCCGAGGACGCCCTGTCCCAGTGGAAGAGGATTATGCT
TTTGGTCGTGGCCATCACGGTCCACAACATTCCAGAAGGGCTGGCTGTGG
GCGTAAGCTTTGGTGCCATTGGCTCCACGAACTCATCGACATTTGAGAGC
GCCCGCAATTTGGCCATTGGCATTGGCATTCAAAACTTCCCCGAGGGATT
GGCTGTCAGCTTGCCACTGCATGCCGCAGGATTCAGCGTGAAGCGGGCTC
TGTGGTACGGACAGCTGTCCGGAATGGTGGAGCCCATTTTTGGGAGTCTG
GGCGCC
BO08468.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13189-PA | 1026 | CG13189-RA | 1..827 | 17..843 | 4135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip48C-RA | 1878 | CG13189-RA | 446..1285 | 17..856 | 4155 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:10:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11899962..11900801 | 17..856 | 4155 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:10:36 has no hits.
BO08468.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:48:00 Download gff for
BO08468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-PA | 1..840 | 17..856 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:43:03 Download gff for
BO08468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-PA | 1..840 | 17..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:28:38 Download gff for
BO08468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-RA | 446..1285 | 17..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:31:16 Download gff for
BO08468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zip48C-RA | 446..1285 | 17..856 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:31:16 Download gff for
BO08468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11899962..11900801 | 17..856 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:28:38 Download gff for
BO08468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7787467..7788306 | 17..856 | 99 | | Plus |
BO08468.complete Sequence
1057 bp (1057 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ631208
> BO08468.complete
GAAGTTATCAGTCGACATGATTCCAGGCTATGGACCCGTCACGCAGGCTC
TGCTGGGCACCCTGCTTACCTGGGGACTGACCGCCGCTGGCGCCGCCCTA
GTGATCTTCGTCCGGGGTAACCAGCGGAGGTCTCTGGACGCCGCCCTGGG
ATTCGCAGCTGGCGTAATGATAGCAGCCTCCTTTTGGTCACTCCTCAAGC
CGGCCATCGAAATGGCCGAGAGTTCCCATTTGTACGGAGTATACGCCTTT
CTGCCCGTCGCTGGAGGCTTCCTCTTGGGATCGATCTTCGTCTACGGATG
CGACAAATTGATGTCATACCTGGGCCTTAACAGCACCAACATGATGATCC
AGATGACGCAATCAAAAGCCAAGGCGGACATAGCCATCGAGGACTCTAAG
CGCAATGGAGTTGCCCCCGATAGGTTGGCCTCAAAGAGTCTGGACAGCTT
CTCCGACTGCCTTAGCGTGCAGCACAGCGGCGAATCGAGACGCCGAAAGA
AGGGAGCTAGCATCAACGAGATGGAGCAGTGCACCTACACCACGCCTGAG
GAGCAGCAGCGCGCCGAGGACGCCCTGTCCCAGTGGAAGAGGATTATGCT
TTTGGTCGTGGCCATCACGGTCCACAACATTCCAGAAGGGCTGGCTGTGG
GCGTAAGCTTTGGTGCCATTGGCTCCACGAACTCATCGACATTTGAGAGC
GCCCGCAATTTGGCCATTGGCATTGGCATTCAAAACTTCCCCGAGGGATT
GGCTGTCAGCTTGCCACTGCATGCCGCAGGATTCAGCGTGAAGCGGGCTC
TGTGGTACGGACAGCTGTCCGGAATGGTGGAGCCCATTTTTGGAGTTCTG
GGCGCCGTGGCGGTGACCTTTGCCAACCTGATCCTGCCATACGCCTTGTC
TTTTGCGGCCGGAGCCATGATATACATTGTGTCGGACGACATTCTGCCGG
AGGCTCATGCCAGCGGAAATGGAACGATCGCCACGTGGGGCACTGTATCC
GGCTTCCTGATCATGATGTGTCTGGAGGTGGCGCTGTCGGCAAGCTTTCT
AGACCAT
BO08468.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:50:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip48C-RA | 1026 | CG13189-PA | 1..1023 | 17..1039 | 5115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip48C-RA | 1878 | CG13189-RA | 446..1468 | 17..1039 | 5115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:50:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11899962..11900984 | 17..1039 | 5115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:50:29 has no hits.
BO08468.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:04 Download gff for
BO08468.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-RA | 1..1026 | 17..1042 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:32:56 Download gff for
BO08468.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-RA | 444..1466 | 17..1039 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:34:03 Download gff for
BO08468.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-RA | 446..1468 | 17..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:04 Download gff for
BO08468.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13189-RA | 444..1466 | 17..1039 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:27:24 Download gff for
BO08468.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zip48C-RA | 446..1468 | 17..1041 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:27:24 Download gff for
BO08468.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11899962..11900984 | 17..1041 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:34:03 Download gff for
BO08468.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7787467..7788489 | 17..1041 | 99 | | Plus |
BO08468.pep Sequence
Translation from 16 to 1057
> BO08468.pep
MIPGYGPVTQALLGTLLTWGLTAAGAALVIFVRGNQRRSLDAALGFAAGV
MIAASFWSLLKPAIEMAESSHLYGVYAFLPVAGGFLLGSIFVYGCDKLMS
YLGLNSTNMMIQMTQSKAKADIAIEDSKRNGVAPDRLASKSLDSFSDCLS
VQHSGESRRRKKGASINEMEQCTYTTPEEQQRAEDALSQWKRIMLLVVAI
TVHNIPEGLAVGVSFGAIGSTNSSTFESARNLAIGIGIQNFPEGLAVSLP
LHAAGFSVKRALWYGQLSGMVEPIFGVLGAVAVTFANLILPYALSFAAGA
MIYIVSDDILPEAHASGNGTIATWGTVSGFLIMMCLEVALSASFLDH
BO08468.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:55:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip48C-PA | 341 | CG13189-PA | 1..341 | 1..341 | 1719 | 100 | Plus |
