Clone Sequence Records
BO08495.3prime Sequence
926 bp (838 high quality bases) assembled on 2006-01-06
> BO08495.3prime
ATGGTCTAGAAAGCTTGCATTTTTCAAGCTTCCTTTAAAAGATTGTAGTC
TTTGGAGGCGTCTAAAGGTGGGACTAATAAAGCGCCCGGCCAAAGCGCGC
AAATACGAAGATATTTTGGAGCATGCATACATCAAGGCAGCAAGGGTATT
TTTTGCTGCAGATGACCAAACTGGTCTGGAGTTATGAACCAAACCAGCAA
TGGTTGCTGGTGTTGCCTTCCCCCATTTCGGTGTAGTTGCCCAATTTAGA
AGAGAGCGCAGATATGAAACCGCTGAGGACCAAACTGTTTTCAAAGCTGA
ATATGGTCCAGCTCGTGATCCCTGGGAAAGTGTTTTAGCGACTGTTTCCG
TAGCAGAATTCACTGAAGCTTTGCTTGGTAGGGATTTCACAGCCACGTTC
GCAGCCGATGCTAAGGACGAACTGGAAGTTGCAGAAGAACCTACGGCTCT
TTGGCCTCGGATTACTGTTTTGGCCACGACTTTGGCAGCCGAAGAAAAGG
GCGCGTTCAGAGTCCTAGGAGAAACTCGAGTATTTGCCCATGGCGCCAGT
TTGCCGAGTCCCAGTATTCTTTTCGATCTCAATGCCAATAGCCCGGAGGA
CAATGTCCATAGGGATCCGAGATGCGAATCGCTTAGTTCCTGCGTTGGAA
TTGGCCGGGGAACTGGGATAGATGGCGGCGGTTTCTGGAATACCCGGTAC
CCCACGTATGTACCAACCAGCAAGCCTCCGATGAAGGCAGCAACTTTGAG
CTTTTCGCGAAAACTAGCAGGCGGCGTTTCGGGTGGCATTGGGAAGAATG
GATTTCCCAATTCAGGCAGTTGGCCATTAGCGTTCTCAGCGGGAATAATG
GCTTCAACGTCCATGGACTGGAAGCAGCAATCGTACAAGGCCCCTCTCTG
ATGGTCAATCAGGACGCGATGGGCCT
BO08495.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-PA | 1062 | CG7133-RA | 152..1059 | 926..19 | 4515 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-RA | 1456 | CG7133-RA | 339..1246 | 926..19 | 4525 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:45:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22073278..22074185 | 19..926 | 4525 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 18:45:37 has no hits.
BO08495.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:48:42 Download gff for
BO08495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-PA | 152..1062 | 16..926 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:44:03 Download gff for
BO08495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-PA | 152..1062 | 16..926 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:14:32 Download gff for
BO08495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 339..1255 | 11..926 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:20:36 Download gff for
BO08495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 339..1255 | 11..926 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:20:36 Download gff for
BO08495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22073269..22074185 | 11..926 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:14:32 Download gff for
BO08495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22066369..22067285 | 11..926 | 99 | | Plus |
BO08495.5prime Sequence
873 bp (851 high quality bases) assembled on 2006-01-06
> BO08495.5prime
GAAGTTATCAGTCGACATGAGCGATGTCTACGAAGATCACTACCAGGTTC
TGGGCTTACCGAGAAATGCCACCGACAGTGAGATTAAGGATGCTTTTCGG
CGGCTGTCCCTGCAATATCATCCCGACAAAAACGAGGATGGAGCGAAGGA
GTTCCTTAGAATCAACGAGGCCCATCGCGTCCTGATTGACCATCAGAGAA
GGGCCTTGTACGATTGCTGCTTCCAGTCCATGGACGTTGAAGCCATTATT
CCCGCTGAGAACGCTAATGGCCAACTGCCTGAATTGGGAAATCCATTCTT
CCCAATGCCACCCGAAACGCCGCCTGCTAGTTTTCGCGAAAAGCTCAAAG
TTGCTGCCTTCATCGGAGGCTTGCTGGTTGGTACATACGTGGGGTACCGG
GTATTCCAGAAACCGCCGCCATCTATCCCAGTTCCCCGGCCAATTCCAAC
GCAGGAACTAAGCGATTCGCATCTCGGATCCCTATGGACATTGTCCTCCG
GGCTATTGGCATTGAGATCGAAAAGAATACTGGGACTCGGCAAACTGGCG
CCATGGGCAAATACTCGAGTTTCTCCTAGGACTCTGAACGCGCCCTTTTC
TTCGGCTGCCAAAGTCGTGGCCAAAACAGTAATCCGAGGCCAAAGAGCCG
TAGGTTCTTCTGCAACTTCCAGTTCGTCCTTAGCATCGGCTGCGAACGTG
GCTGTGAAATCCCTACCAAGCAAAGCTTCAGTGAATTCTGCTACGGAAAC
AGTCGCTAAAACACTTTCCCAGGGATCACGAGCTGGACCATATTCAGCTT
TGAAAACAGTTTGGTCCTCAGCGGTTTCATATCTGCGCTCTCTTCTAAAT
TGGGCACTACACCGAAATGGGGG
BO08495.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-PA | 1062 | CG7133-RA | 1..840 | 17..856 | 4200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:07:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-RA | 1456 | CG7133-RA | 188..1045 | 17..873 | 4265 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:07:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22073479..22074336 | 873..17 | 4240 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:07:37 has no hits.
BO08495.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:48:43 Download gff for
BO08495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-PA | 1..858 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:44:04 Download gff for
BO08495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-PA | 1..858 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:03:47 Download gff for
BO08495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1045 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:42:04 Download gff for
BO08495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1045 | 17..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:42:04 Download gff for
BO08495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22073479..22074336 | 17..873 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:03:47 Download gff for
BO08495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22066579..22067436 | 17..873 | 99 | | Minus |
BO08495.complete Sequence
1093 bp (1093 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ631216
> BO08495.complete
GAAGTTATCAGTCGACATGAGCGATGTCTACGAAGATCACTACCAGGTTC
TGGGCTTACCGAGAAATGCCACCGACAGTGAGATTAAGGATGCTTTTCGG
CGGCTGTCCCTGCAATATCATCCCGACAAAAACGAGGATGGAGCGAAGGA
GTTCCTTAGAATCAACGAGGCCCATCGCGTCCTGATTGACCATCAGAGAA
GGGCCTTGTACGATTGCTGCTTCCAGTCCATGGACGTTGAAGCCATTATT
CCCGCTGAGAACGCTAATGGCCAACTGCCTGAATTGGGAAATCCATTCTT
CCCAATGCCACCCGAAACGCCGCCTGCTAGTTTTCGCGAAAAGCTCAAAG
TTGCTGCCTTCATCGGAGGCTTGCTGGTTGGTACATACGTGGGGTACCGG
GTATTCCAGAAACCGCCGCCATCTATCCCAGTTCCCCGGCCAATTCCAAC
GCAGGAACTAAGCGATTCGCATCTCGGATCCCTATGGACATTGTCCTCCG
GGCTATTGGCATTGAGATCGAAAAGAATACTGGGACTCGGCAAACTGGCG
CCATGGGCAAATACTCGAGTTTCTCCTAGGACTCTGAACGCGCCCTTTTC
TTCGGCTGCCAAAGTCGTGGCCAAAACAGTAATCCGAGGCCAAAGAGCCG
TAGGTTCTTCTGCAACTTCCAGTTCGTCCTTAGCATCGGCTGCGAACGTG
GCTGTGAAATCCCTACCAAGCAAAGCTTCAGTGAATTCTGCTACGGAAAC
AGTCGCTAAAACACTTTCCCAGGGATCACGAGCTGGACCATATTCAGCTT
TGAAAACAGTTTGGTCCTCAGCGGTTTCATATCTGCGCTCTCTTCTAAAT
TGGGCAACTACACCGAAATGGGGGAAGGCAACACCAGCAACCATTGCTGG
TTTGGTTCATAACTCCAGACCAGTTTGGTCATCTGCAGCAAAAAATACCC
TTGCTGCCTTGATGTATGCATGCTCCAAAATATCTTCGTATTTGCGCGCT
TTGGCCGGGCGCTTTATTAGTCCCACCTTTAGACGCCTCCAAAGACTACA
ATCTTTTAAAGGAAGCTTGAAAAATGCAAGCTTTCTAGACCAT
BO08495.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:53:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-RA | 1062 | CG7133-PA | 1..1059 | 17..1075 | 5295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:53:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-RA | 1456 | CG7133-RA | 188..1246 | 17..1075 | 5295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:53:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22073278..22074336 | 1075..17 | 5295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:53:07 has no hits.
BO08495.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:37 Download gff for
BO08495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 1..1062 | 17..1078 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:32:43 Download gff for
BO08495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 187..1254 | 17..1083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:42 Download gff for
BO08495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1246 | 17..1077 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:37 Download gff for
BO08495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 187..1254 | 17..1083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:29:24 Download gff for
BO08495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1246 | 17..1077 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:29:24 Download gff for
BO08495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22073275..22074336 | 17..1077 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:42 Download gff for
BO08495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22066375..22067436 | 17..1077 | 99 | | Minus |
BO08495.pep Sequence
Translation from 16 to 1093
> BO08495.pep
MSDVYEDHYQVLGLPRNATDSEIKDAFRRLSLQYHPDKNEDGAKEFLRIN
EAHRVLIDHQRRALYDCCFQSMDVEAIIPAENANGQLPELGNPFFPMPPE
TPPASFREKLKVAAFIGGLLVGTYVGYRVFQKPPPSIPVPRPIPTQELSD
SHLGSLWTLSSGLLALRSKRILGLGKLAPWANTRVSPRTLNAPFSSAAKV
VAKTVIRGQRAVGSSATSSSSLASAANVAVKSLPSKASVNSATETVAKTL
SQGSRAGPYSALKTVWSSAVSYLRSLLNWATTPKWGKATPATIAGLVHNS
RPVWSSAAKNTLAALMYACSKISSYLRALAGRFISPTFRRLQRLQSFKGS
LKNASFLDH
BO08495.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-PA | 353 | CG7133-PA | 1..353 | 1..353 | 1803 | 100 | Plus |
| CG32641-PA | 132 | CG32641-PA | 3..123 | 6..131 | 174 | 34.1 | Plus |
| CG32640-PA | 132 | CG32640-PA | 3..123 | 6..131 | 174 | 34.1 | Plus |
| CG5001-PC | 346 | CG5001-PC | 3..65 | 6..66 | 169 | 49.2 | Plus |
| CG5001-PD | 350 | CG5001-PD | 3..65 | 6..66 | 169 | 49.2 | Plus |
