Clone Sequence Records
BO08506.3prime Sequence
941 bp (849 high quality bases) assembled on 2006-01-06
> BO08506.3prime
ATGGTCTAGAAAGCTTGCTGGTCTTTCAAGTCCTTCCATCCTCAAATGAA
CTCCCTCCTGGGTGGATATCAGGAAATTACGACTGGAAAACTTCAGCGGG
ATCTGTGTTTTCTCCGACCTGCTGAACTTAAAATCCCTTAGAAGGTATAC
AAGACCCACCTTCACTTGCAGTTTACCAAAACGCTCGCCTATGCAATTTC
GAGGACCCTCGCCAAAAGGCAAATAGGCGAAAGGATGCCTAGCCTTAATC
TCTTCTGGCTCAAAGCGACTGGGATCAAACTTTTCTGGATCGGGATAAAG
CTCTGGGTCGTGATGAATACTATGCACAGGTATTATTATCTTAGATCCCG
GCTCCAGGATTAGGTTGCTATTCGGTATCTGGTACTCCTTGGTGGAACGC
CTCAGTAAGTGAGGCAGTATAGGATACTTGCGAAGCGTCTCGGCAACCAC
TTGGTCCAGGTAGGGCATCTCCTGAACGGAGTCGTACGTGAGCTTTTGGT
TGTTGCGTTTCAAAACGGCGAGTACCTCAACCCGTAGCCTTTCTTGGACA
TCGGGGTTGAGGGCCAGCTCATACAGGCAGAAGGACATGGTGGTGGAGGA
GGTGTCGAACCCGGCCAAAAAGAAAACCAATGCCTGGGCCGCAATCTGCT
CGAAGGAGAGGGCGTCTTTTACTCCCTCCTCACCCAATTCCATTAGTAGT
TGGATCAGGTCGTTGCGATGAATATTCTCCCGTCGCCTGTAGTCCAATGT
CTGGCGTACCGTGTCCAAGAAGAACTCACTGACCTCCGGGCGAAAAAGCC
TGAAGCGCAGCTTCCTAGCCAACTCCGGCTGGGCAAACATAAAGGCCTGG
ACGAGCACCGAATGCAGGGGCTCCTGGGTCACTGATCGGCCCATTCGCCG
GAACTGCGACTCCGGATCCTGGAGACTATTACACTCGAGGC
BO08506.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2397-PA | 1482 | Cyp6a13-RA | 557..1479 | 941..19 | 4615 | 100 | Minus |
| CG8687-PB | 1314 | Cyp6a14-RB | 655..717 | 624..562 | 165 | 90.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:50:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a13-RA | 1649 | CG2397-RA | 589..1511 | 941..19 | 4615 | 100 | Minus |
| Cyp6a14-RE | 2959 | CG8687-RE | 2164..2253 | 651..562 | 270 | 86.7 | Minus |
| Cyp6a14-RC | 1626 | CR8687-RC | 940..1029 | 651..562 | 270 | 86.7 | Minus |
| Cyp6a14-RE | 2959 | CG8687-RE | 2491..2609 | 327..209 | 190 | 77.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:50:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8571087..8572009 | 941..19 | 4615 | 100 | Minus |
| 2R | 25286936 | 2R | 8564950..8565039 | 562..651 | 270 | 86.7 | Plus |
| 2R | 25286936 | 2R | 8564537..8564655 | 209..327 | 190 | 77.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:50:18 has no hits.
BO08506.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:48:54 Download gff for
BO08506.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2397-PA | 557..1482 | 15..941 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:44:19 Download gff for
BO08506.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2397-PA | 557..1482 | 15..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:04:07 Download gff for
BO08506.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 589..1519 | 11..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:05:17 Download gff for
BO08506.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 589..1519 | 11..941 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:05:17 Download gff for
BO08506.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8571087..8572014 | 17..941 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:04:07 Download gff for
BO08506.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4458592..4459519 | 17..941 | 99 | -> | Minus |
BO08506.5prime Sequence
915 bp (840 high quality bases) assembled on 2006-01-06
> BO08506.5prime
GAAGTTATCAGTCGACATGCTGACGCTCCTGGTACTCGTGTTCACCGTCG
GACTTCTGCTATATGTCAAGCTACGCTGGCATTACAGCTACTGGAGCAGA
AGGGGCGTCGCCGGAGAAAGACCCGTGTACTTCCGCGGCAATATGAGTGG
GCTGGGAAGGGACCTTCACTGGACGGATATCAACCTGCGGATCTACCGGA
AGTTTCGGGGAGTGGAGCGCTACTGCGGCTACTTCACTTTTATGACCAAG
TCGCTGTTTATCATGGATCTGGAACTGATCCGCGATATAATGATCAGGGA
CTTTTCCAGCTTCGCCGATCGAGGACTCTTCCATAATGTGCGGGACGATC
CACTGACCGGGAACCTTCTCTTCCTGGACGGACCGGAGTGGCGCTGGTTG
CGCCAGAATTTGACGCAGGTGTTCACCTCCGGCAAGATGAAATTCATGTT
CCCCAACATGGTGGAGGTGGGCGAGAAGCTAACGCAGGCGTGTCGCCTCC
AGGTCGGCGAGATAGAGGCAAAGGATCTGTGTGCCAGGTTCACCACGGAT
GTGATCGGCAGCTGTGCCTTCGGCCTCGAGTGTAATAGTCTCCAGGATCC
GGAGTCGCAGTTCCGGCGAATGGGCCGATCAGTGACCCAGGAGCCCCTGC
ATTCGGTGCTCGTCCAGGCCTTTATGTTTGCCCAGCCGGAGTTGGCTAGG
AAGCTGCGCTTCAGGCTTTTTCGCCCGGAGGTCAGTGAGTTCTTCTTGGA
CACGGTACGCCAGACATTGGACTACAGGCGACGGGAGAATATTCATCGCA
ACGACCTGATCCAACTACTAATGGAATTGGGTGAGGAGGGAGTAAAAGAC
GCCCTCTCCTTCGAGCAGATTGCGGCCCAGGCATTGGTTTTCTTTTTGGC
GGGGTCGACACCTCT
BO08506.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2397-PA | 1482 | Cyp6a13-RA | 1..884 | 17..900 | 4420 | 100 | Plus |
| CG9438-PA | 1521 | Cyp6a2-RA | 538..590 | 533..585 | 140 | 90.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 03:40:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a13-RA | 1649 | CG2397-RA | 32..931 | 16..914 | 4460 | 99.8 | Plus |
| Cyp6a14-RE | 2959 | CG8687-RE | 1789..1868 | 521..600 | 190 | 84 | Plus |
| Cyp6a14-RC | 1626 | CR8687-RC | 565..644 | 521..600 | 190 | 84 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 03:40:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8570530..8571419 | 16..905 | 4435 | 99.9 | Plus |
| 2R | 25286936 | 2R | 6780843..6780895 | 585..533 | 190 | 90.6 | Minus |
| 2R | 25286936 | 2R | 8565335..8565414 | 600..521 | 190 | 82.5 | Minus |
Blast to na_te.dros performed on 2015-02-10 03:40:28 has no hits.
BO08506.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:48:55 Download gff for
BO08506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2397-PA | 1..899 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:44:20 Download gff for
BO08506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2397-PA | 1..899 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:45:19 Download gff for
BO08506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 32..931 | 16..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:18:19 Download gff for
BO08506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 32..931 | 16..915 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:18:19 Download gff for
BO08506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8570530..8571429 | 16..915 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:45:19 Download gff for
BO08506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4458035..4458934 | 16..915 | 99 | | Plus |
BO08506.complete Sequence
1513 bp (1513 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ631220
> BO08506.complete
GAAGTTATCAGTCGACATGCTGACGCTCCTGGTACTCGTGTTCACCGTCG
GACTTCTGCTATATGTCAAGCTACGCTGGCATTACAGCTACTGGAGCAGA
AGGGGCGTCGCCGGAGAAAGACCCGTGTACTTCCGCGGCAATATGAGTGG
GCTGGGAAGGGACCTTCACTGGACGGATATCAACCTGCGGATCTACCGGA
AGTTTCGGGGAGTGGAGCGCTACTGCGGCTACTTCACTTTTATGACCAAG
TCGCTGTTTATCATGGATCTGGAACTGATCCGCGATATAATGATCAGGGA
CTTTTCCAGCTTCGCCGATCGAGGACTCTTCCATAATGTGCGGGACGATC
CACTGACCGGGAACCTTCTCTTCCTGGACGGACCGGAGTGGCGCTGGTTG
CGCCAGAATTTGACGCAGGTGTTCACCTCCGGCAAGATGAAATTCATGTT
CCCCAACATGGTGGAGGTGGGCGAGAAGCTAACGCAGGCGTGTCGCCTCC
AGGTCGGCGAGATAGAGGCAAAGGATCTGTGTGCCAGGTTCACCACGGAT
GTGATCGGCAGCTGTGCCTTCGGCCTCGAGTGTAATAGTCTCCAGGATCC
GGAGTCGCAGTTCCGGCGAATGGGCCGATCAGTGACCCAGGAGCCCCTGC
ATTCGGTGCTCGTCCAGGCCTTTATGTTTGCCCAGCCGGAGTTGGCTAGG
AAGCTGCGCTTCAGGCTTTTTCGCCCGGAGGTCAGTGAGTTCTTCTTGGA
CACGGTACGCCAGACATTGGACTACAGGCGACGGGAGAATATTCATCGCA
ACGACCTGATCCAACTACTAATGGAATTGGGTGAGGAGGGAGTAAAAGAC
GCCCTCTCCTTCGAGCAGATTGCGGCCCAGGCATTGGTTTTCTTTTTGGC
CGGGTTCGACACCTCCTCCACCACCATGTCCTTCTGCCTGTATGAGCTGG
CCCTCAACCCCGATGTCCAAGAAAGGCTACGGGTTGAGGTACTCGCCGTT
TTGAAACGCAACAACCAAAAGCTCACGTACGACTCCGTTCAGGAGATGCC
CTACCTGGACCAAGTGGTTGCCGAGACGCTTCGCAAGTATCCTATACTGC
CTCACTTACTGAGGCGTTCCACCAAGGAGTACCAGATACCGAATAGCAAC
CTAATCCTGGAGCCGGGATCTAAGATAATAATACCTGTGCATAGTATTCA
TCACGACCCAGAGCTTTATCCCGATCCAGAAAAGTTTGATCCCAGTCGCT
TTGAGCCAGAAGAGATTAAGGCTAGGCATCCTTTCGCCTATTTGCCTTTT
GGCGAGGGTCCTCGAAATTGCATAGGCGAGCGTTTTGGTAAACTGCAAGT
GAAGGTGGGTCTTGTATACCTTCTAAGGGATTTTAAGTTCAGCAGGTCGG
AGAAAACACAGATCCCGCTGAAGTTTTCCAGTCGTAATTTCCTGATATCC
ACCCAGGAGGGAGTTCATTTGAGGATGGAAGGACTTGAAAGACCAGCAAG
CTTTCTAGACCAT
BO08506.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:09:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a13-RA | 1482 | CG2397-PA | 1..1479 | 17..1495 | 7395 | 100 | Plus |
| Cyp6a14-RE | 1528 | CG8687-PE | 899..988 | 863..952 | 270 | 86.7 | Plus |
| Cyp6a14-RC | 1528 | CG8687-PC | 899..988 | 863..952 | 270 | 86.7 | Plus |
| Cyp6a14-RE | 1528 | CG8687-PE | 524..603 | 521..600 | 190 | 82.5 | Plus |
| Cyp6a14-RE | 1528 | CG8687-PE | 1226..1344 | 1187..1305 | 190 | 77.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a13-RA | 1649 | CG2397-RA | 32..1511 | 16..1495 | 7400 | 100 | Plus |
| Cyp6a14-RE | 2959 | CG8687-RE | 2164..2253 | 863..952 | 270 | 86.7 | Plus |
| Cyp6a14-RC | 1626 | CR8687-RC | 940..1029 | 863..952 | 270 | 86.7 | Plus |
| Cyp6a14-RE | 2959 | CG8687-RE | 1789..1868 | 521..600 | 190 | 82.5 | Plus |
| Cyp6a14-RE | 2959 | CG8687-RE | 2491..2609 | 1187..1305 | 190 | 77.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8570530..8572009 | 16..1495 | 7400 | 100 | Plus |
| 2R | 25286936 | 2R | 8564950..8565039 | 952..863 | 270 | 86.7 | Minus |
| 2R | 25286936 | 2R | 6780843..6780895 | 585..533 | 190 | 90.6 | Minus |
| 2R | 25286936 | 2R | 8564537..8564655 | 1305..1187 | 190 | 77.3 | Minus |
| 2R | 25286936 | 2R | 8565335..8565414 | 600..521 | 190 | 82.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:09:53 has no hits.
BO08506.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:54 Download gff for
BO08506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 1..1482 | 17..1499 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:32:45 Download gff for
BO08506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 29..1516 | 16..1503 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:29:22 Download gff for
BO08506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 33..1511 | 17..1497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:54 Download gff for
BO08506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 29..1516 | 16..1503 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:12:17 Download gff for
BO08506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 33..1511 | 17..1497 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:12:17 Download gff for
BO08506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8570531..8572009 | 17..1497 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:29:22 Download gff for
BO08506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4458036..4459514 | 17..1497 | 99 | | Plus |
BO08506.pep Sequence
Translation from 16 to 1513
> BO08506.pep
MLTLLVLVFTVGLLLYVKLRWHYSYWSRRGVAGERPVYFRGNMSGLGRDL
HWTDINLRIYRKFRGVERYCGYFTFMTKSLFIMDLELIRDIMIRDFSSFA
DRGLFHNVRDDPLTGNLLFLDGPEWRWLRQNLTQVFTSGKMKFMFPNMVE
VGEKLTQACRLQVGEIEAKDLCARFTTDVIGSCAFGLECNSLQDPESQFR
RMGRSVTQEPLHSVLVQAFMFAQPELARKLRFRLFRPEVSEFFLDTVRQT
LDYRRRENIHRNDLIQLLMELGEEGVKDALSFEQIAAQALVFFLAGFDTS
STTMSFCLYELALNPDVQERLRVEVLAVLKRNNQKLTYDSVQEMPYLDQV
VAETLRKYPILPHLLRRSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPEL
YPDPEKFDPSRFEPEEIKARHPFAYLPFGEGPRNCIGERFGKLQVKVGLV
YLLRDFKFSRSEKTQIPLKFSSRNFLISTQEGVHLRMEGLERPASFLDH
BO08506.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:13:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a13-PA | 493 | CG2397-PA | 1..493 | 1..493 | 2577 | 100 | Plus |
| Cyp6a14-PE | 509 | CG8687-PE | 1..507 | 4..488 | 1412 | 53.1 | Plus |
| Cyp6a14-PC | 509 | CG8687-PC | 1..507 | 4..488 | 1412 | 53.1 | Plus |
| Cyp6a22-PC | 499 | CG10240-PC | 4..499 | 1..495 | 1165 | 45.6 | Plus |
| Cyp6a22-PB | 499 | CG10240-PB | 4..499 | 1..495 | 1165 | 45.6 | Plus |
