Clone BO08510 Report

Search the DGRC for BO08510

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:85
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG9967-RA
Protein status:BO08510.pep: validated full length
Sequenced Size:928

Clone Sequence Records

BO08510.3prime Sequence

903 bp (826 high quality bases) assembled on 2006-01-06

> BO08510.3prime
ATGGTCTAGAAAGCTTGCCTCTTCGATGGTGCAGAGCGTGGGCCGCGGGC
GGTTGGCAAGTCCTGTAATACTGCTGCTGGAGTATCCTTTTTTTGAGACC
TTTTTGCTGCTGCCAAGGCCATCGCACGAGTCTGAGGGGTAGGAACTTGG
AGGAGTTGCGGATGCTGGCTTACTGCGGTTTTTAGGCTGCTGGCGATGGA
CGTAGATGCCGCTCCTGCGGATTTTGCGATACAGCGAGATGTACTTGCCC
GCTGTCGTCGTCCTTGGAACAATGCACTGCTCACAGAAGGCGGTCTTGCT
GCGGGCGGCCTCGCTCAGGTGGGCGTGGCCGAGGGCCTGCAGGAAGGCCA
GGACGAAGGCGTAGCAGTTGTGGCTCTCCTCCGCATAACTGGCGATGGAC
CAGCGCACCGATTGGGCGCAGATCTGCTGCAGGACCTCGTCCCAAAAGTC
GTGCCACGGCTCCGGCACATCGCCCACCATCAGCGACTGCCGCCACTCCG
GAGGATTATCATCCCGCCGATGGCGGCGAAGGCCAAAGCGATCGAACTCC
ACGATGTCGCCGCCGGATGTGGTCACTGCGATATGCAAATCGGTGGCGTT
GCTGTAATCGTTGAGGAAATCGCCGGCGGAGGGACGCAGGACAATGGCGC
ACGGATGCTGCGTGGCCCGCACAAAAGGATATGGCAGGCGGAAGGGCAGG
AGGAGGAGGCGTGGCCCGGCCCTGTCTAGTTGCGCACTCGGATCCGCATC
CCCATCGACATCCCCATGCGCATCCACATCCGCGTCCAGTGGGGCATTGC
AATGGGGACAAGTGTGCGGCAAAGTGAAGCAAAAAACTTTCACGTTGCAG
TGATGAAAACAGAGGATGCCCCGATCCGAGGTAATTGTGGTTGTACTTGT
CGT

BO08510.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG9967-PB 897 CG9967-RB 10..894 903..19 4375 99.7 Minus
CG9967-PA 897 CG9967-RA 10..894 903..19 4375 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG9967-RC 1628 CG9967-RC 619..1503 903..19 4395 99.8 Minus
CG9967-RA 1647 CG9967-RA 675..1559 903..19 4395 99.8 Minus
CG9967-RB 1783 CG9967-RB 774..1658 903..19 4395 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2308886..2309293 19..426 2040 100 Plus
2L 23513712 2L 2310126..2310418 611..903 1435 99.3 Plus
2L 23513712 2L 2309516..2309712 424..620 955 99 Plus
Blast to na_te.dros performed on 2015-02-12 12:03:49 has no hits.

BO08510.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:49:01 Download gff for BO08510.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9967-PA 10..897 15..903 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:44:27 Download gff for BO08510.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9967-PA 10..897 15..903 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:49:03 Download gff for BO08510.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9967-RB 774..1663 11..903 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:54:10 Download gff for BO08510.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9967-RB 774..1663 11..903 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:54:10 Download gff for BO08510.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 2309516..2309702 424..610 100 <- Plus
2L 2308881..2309290 11..423 99 <- Plus
2L 2310126..2310418 611..903 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:49:03 Download gff for BO08510.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2308881..2309290 11..423 99 <- Plus
arm_2L 2309516..2309702 424..610 100 <- Plus
arm_2L 2310126..2310418 611..903 99   Plus

BO08510.5prime Sequence

918 bp (777 high quality bases) assembled on 2006-01-06

> BO08510.5prime
GAAGTTATCAGTCGACATGTTGGCTACGACAAGTACAACCACAATTACCT
CGGATCCGGGCATCCTCTGTTTTCATCACTGCAACGTGAAAGTTTTCTGC
TTCACTTTGCCGCACACTTGTCCCCATTGCAATGCCCCACTGGACGCGGA
TGTGGATGCGCATGGGGATGTCGATGGGGATGCGGATCCGAGTGCGCAAC
TAGACAGGGCCGGGCCACGCCTCCTCCTCCTGCCCTTCCGCCTGCCATAT
CCTTTTGTGCGGGCCACGCAGCATCCGTGCGCCATTGTCCTGCGTCCCTC
CGCCGGCGATTTCCTCAACGATTACAGCAACGCCACCGATTTGCATATCG
CAGTGACCACATCCGGCGGCGACATCGTGGAGTTCGATCGCTTTGGCCTT
CGCCGCCATCGGCGGGATGATAATCCTCCGGAGTGGCGGCAGTCGCTGAT
GGTGGGCGATGTGCCGGAGCCGTGGCACGACTTTTGGGACGAGGTCCTGC
AGCAGATCTGCGCCCAATCGGTGCGCTGGTCCATCGCCAGTTATGCGGAG
GAGAGCCACAACTGCTACGCCTTCGTCCTGGCCTTCCTGCAGGCCCTCGG
CCACGCCCACCTGAGCGAGGCCGCCCGCAGCAAGACCGCCTTCTGTGAGC
AGTGCATTGTTCCAAGGACGACGACAGCGGGCAAGTACATCTCGCTGTAT
CGCANAATCCGCAGGAGCGGCATCTACGTCCATCGCCAGCAGCCTAAAAA
CCGCAGTAAGCCAGCATCCGCAACTCCTCCAAGTTCCTACCCCTCAGACT
CGTGCGATGGCCTTGGCAGCAGCAAAAAGGTCTCAAAAAAAAGATACTCC
AGCAGCAGTATTACAGGACTTGCCAACCGCCCGCGGCCCACGCTCTGCAC
CATCGAAAAGGCAAGCTT

BO08510.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9967-PB 897 CG9967-RB 1..891 17..907 4411 99.7 Plus
CG9967-PA 897 CG9967-RA 1..891 17..907 4411 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:15:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG9967-RC 1628 CG9967-RC 609..1500 16..907 4434 99.8 Plus
CG9967-RA 1647 CG9967-RA 665..1556 16..907 4434 99.8 Plus
CG9967-RB 1783 CG9967-RB 764..1655 16..907 4434 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:15:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2308889..2309293 907..503 1999 99.5 Minus
2L 23513712 2L 2310126..2310428 318..16 1515 100 Minus
2L 23513712 2L 2309516..2309712 505..309 955 99 Minus
Blast to na_te.dros performed on 2015-02-10 20:15:24 has no hits.

BO08510.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:49:02 Download gff for BO08510.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9967-PA 1..897 17..914 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:44:29 Download gff for BO08510.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9967-PA 1..897 17..914 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:30:43 Download gff for BO08510.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9967-RB 755..1663 5..918 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:00:18 Download gff for BO08510.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9967-RB 755..1663 5..918 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:00:18 Download gff for BO08510.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2310126..2310437 5..318 98   Minus
2L 2308881..2309290 506..918 98 <- Minus
2L 2309516..2309702 319..505 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:30:43 Download gff for BO08510.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2308881..2309290 506..918 98 <- Minus
arm_2L 2309516..2309702 319..505 100 <- Minus
arm_2L 2310126..2310437 5..318 98   Minus

BO08510.complete Sequence

928 bp (928 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631222

> BO08510.complete
GAAGTTATCAGTCGACATGTTGGCTACGACAAGTACAACCACAATTACCT
CGGATCCGGGCATCCTCTGTTTTCATCACTGCAACGTGAAAGTTTTCTGC
TTCACTTTGCCGCACACTTGTCCCCATTGCAATGCCCCACTGGACGCGGA
TGTGGATGCGCATGGGGATGTCGATGGGGATGCGGATCCGAGTGCGCAAC
TAGACAGGGCCGGGCCACGCCTCCTCCTCCTGCCCTTCCGCCTGCCATAT
CCTTTTGTGCGGGCCACGCAGCATCCGTGCGCCATTGTCCTGCGTCCCTC
CGCCGGCGATTTCCTCAACGATTACAGCAACGCCACCGATTTGCATATCG
CAGTGACCACATCCGGCGGCGACATCGTGGAGTTCGATCGCTTTGGCCTT
CGCCGCCATCGGCGGGATGATAATCCTCCGGAGTGGCGGCAGTCGCTGAT
GGTGGGCGATGTGCCGGAGCCGTGGCACGACTTTTGGGACGAGGTCCTGC
AGCAGATCTGCGCCCAATCGGTGCGCTGGTCCATCGCCAGTTATGCGGAG
GAGAGCCACAACTGCTACGCCTTCGTCCTGGCCTTCCTGCAGGCCCTCGG
CCACGCCCACCTGAGCGAGGCCGCCCGCAGCAAGACCGCCTTCTGTGAGC
AGTGCATTGTTCCAAGGACGACGACAGCGGGCAAGTACATCTCGCTGTAT
CGCAAAATCCGCAGGAGCGGCATCTACGTCCATCGCCAGCAGCCTAAAAA
CCGCAGTAAGCCAGCATCCGCAACTCCTCCAAGTTCCTACCCCTCAGACT
CGTGCGATGGCCTTGGCAGCAGCAAAAAGGTCTCAAAAAAAGGATACTCC
AGCAGCAGTATTACAGGACTTGCCAACCGCCCGCGGCCCACGCTCTGCAC
CATCGAAGAGGCAAGCTTTCTAGACCAT

BO08510.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:03:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9967-RC 897 CG9967-PC 1..894 17..910 4470 100 Plus
CG9967-RA 897 CG9967-PA 1..894 17..910 4470 100 Plus
CG9967-RB 897 CG9967-PB 1..894 17..910 4470 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG9967-RC 1628 CG9967-RC 609..1503 16..910 4475 100 Plus
CG9967-RA 1647 CG9967-RA 665..1559 16..910 4475 100 Plus
CG9967-RB 1783 CG9967-RB 764..1658 16..910 4475 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:03:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2308886..2309293 910..503 2040 100 Minus
2L 23513712 2L 2310126..2310428 318..16 1515 100 Minus
2L 23513712 2L 2309516..2309712 505..309 955 99 Minus
Blast to na_te.dros performed on 2014-11-27 20:03:47 has no hits.

BO08510.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:55 Download gff for BO08510.complete
Subject Subject Range Query Range Percent Splice Strand
CG9967-RA 1..897 17..914 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:04:34 Download gff for BO08510.complete
Subject Subject Range Query Range Percent Splice Strand
CG9967-RA 632..1540 5..918 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:39 Download gff for BO08510.complete
Subject Subject Range Query Range Percent Splice Strand
CG9967-RB 770..1658 22..912 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:55 Download gff for BO08510.complete
Subject Subject Range Query Range Percent Splice Strand
CG9967-RA 632..1540 5..918 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:13:50 Download gff for BO08510.complete
Subject Subject Range Query Range Percent Splice Strand
CG9967-RB 770..1658 22..912 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:13:50 Download gff for BO08510.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2308884..2309290 506..912 99 <- Minus
2L 2309516..2309702 319..505 100 <- Minus
2L 2310126..2310422 22..318 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:39 Download gff for BO08510.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2309516..2309702 319..505 100 <- Minus
arm_2L 2308884..2309290 506..912 99 <- Minus
arm_2L 2310126..2310422 22..318 100   Minus

BO08510.pep Sequence

Translation from 16 to 928

> BO08510.pep
MLATTSTTTITSDPGILCFHHCNVKVFCFTLPHTCPHCNAPLDADVDAHG
DVDGDADPSAQLDRAGPRLLLLPFRLPYPFVRATQHPCAIVLRPSAGDFL
NDYSNATDLHIAVTTSGGDIVEFDRFGLRRHRRDDNPPEWRQSLMVGDVP
EPWHDFWDEVLQQICAQSVRWSIASYAEESHNCYAFVLAFLQALGHAHLS
EAARSKTAFCEQCIVPRTTTAGKYISLYRKIRRSGIYVHRQQPKNRSKPA
SATPPSSYPSDSCDGLGSSKKVSKKGYSSSSITGLANRPRPTLCTIEEAS
FLDH

BO08510.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:13:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG9967-PC 298 CG9967-PC 1..298 1..298 1615 100 Plus
CG9967-PA 298 CG9967-PA 1..298 1..298 1615 100 Plus
CG9967-PB 298 CG9967-PB 1..298 1..298 1615 100 Plus