Clone BO08515 Report

Search the DGRC for BO08515

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:85
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptGbeta13F-RA
Protein status:BO08515.pep: validated full length
Sequenced Size:1054

Clone Sequence Records

BO08515.3prime Sequence

845 bp (844 high quality bases) assembled on 2006-01-06

> BO08515.3prime
ATGGTCTAGAAAGCTTGCGTTCCATACACGCAAGAAGGAGTCCCACGATC
CTGTTGCCACCGCCATGCCGTTCTCGGTGACACCCAAACAGGATACACGG
TTGTCGTGGCCAGCGAGTATGCCAGACCGTTCTGCCTTCATCGTGTCCCA
TACATTGCAGTTGAAATCATCGTAGCCCGCTAATAACAGACGTCCGCTCT
TCGAGAATGCCACCGATGTGATGCCGCATATGATGTTGTCGTGCGAATAC
ATGGCCAACTCCTGATCGGCACGGATATCGAACAATCGACAGGTTGCGTC
GTCCGAACCGGTGGCGAATGCCTGACCATTCGGGAAAAATGTGACCGCAT
TGATATCGGATTCGTGGCCGGGGAAGGTTTGTTTACAGACACCCTCCCGG
ATGTCCCATAGCTTGGCGGACGCATCGCAGGCGCCGGATACGAACGTTTT
GCATTGGGGCGCCAGTGAGAGGGCCATCACATCGCCGGTGTGGCCCAAAA
ACGAGGTTACCTGCAGTCCCGTCTCGATATCCCACAATCCGCACGACATA
TCACCGGAGCTGGTCACGATCTGATTGTCGTCCAGGAAGCGGCAGCACGA
TAGATAGCCACCATGGCCGGGCAGCTCACGGGACACCCGGACGTTGCCCT
CGCGCGTCTTTAGGTTGTAAATTGAACACATGTTGTCGAGGCCACCGCAG
GCCACATAGCTACCGGATGGGGCGTACGCACAGGTCATCACCCACGAGGA
TCGCAGTGGAATGGCATGGACTTTGTTCGTGGTATGCGAGTCCCAAACGA
TCAGTTTGCCGTCCTGTGAGGCTGATACGAGATTCCTTGAATCGT

BO08515.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG10545-PB 1023 Gbeta13F-RB 194..1020 845..19 4135 100 Minus
CG10545-PA 1023 Gbeta13F-RA 194..1020 845..19 4135 100 Minus
CG10545-PC 1023 Gbeta13F-RC 194..1020 845..19 4135 100 Minus
CG10545-PD 1023 Gbeta13F-RD 194..1020 845..19 4135 100 Minus
CG10545-PE 1023 Gbeta13F-RE 194..1020 845..19 4135 100 Minus
CG10545-PF 1023 Gbeta13F-RF 194..1020 845..19 4135 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:29:28
Subject Length Description Subject Range Query Range Score Percent Strand
Gbeta13F-RH 5178 CG10545-RH 1061..1887 845..19 4135 100 Minus
Gbeta13F-RG 4765 CG10545-RG 648..1474 845..19 4135 100 Minus
Gbeta13F-RF 5080 CG10545-RF 963..1789 845..19 4135 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15861967..15862793 845..19 4135 100 Minus
Blast to na_te.dros performed on 2015-02-10 23:29:26 has no hits.

BO08515.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:49:09 Download gff for BO08515.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10545-PA 194..1023 15..845 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:44:39 Download gff for BO08515.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10545-PF 194..1023 15..845 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:32:54 Download gff for BO08515.3prime
Subject Subject Range Query Range Percent Splice Strand
Gbeta13F-RE 1204..2033 15..845 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:56:42 Download gff for BO08515.3prime
Subject Subject Range Query Range Percent Splice Strand
Gbeta13F-RF 963..1792 15..845 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:56:42 Download gff for BO08515.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15861967..15862796 15..845 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:32:54 Download gff for BO08515.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15756000..15756829 15..845 99   Minus

BO08515.5prime Sequence

916 bp (852 high quality bases) assembled on 2006-01-06

> BO08515.5prime
GAAGTTATCAGTCGACATGAATGAACTAGACAGTCTCAGGCAGGAAGCCG
AGTCCCTAAAGAACGCCATTCGGGATGCCCGGAAGGCGGCCTGCGACACA
TCACTGTTGCAAGCGGCCACCTCGCTGGAACCCATCGGCCGCATACAGAT
GCGCACCCGTCGTACATTACGCGGCCATTTGGCGAAAATCTACGCCATGC
ATTGGGGCAACGATTCAAGGAATCTCGTATCAGCCTCACAGGACGGCAAA
CTGATCGTTTGGGACTCGCATACCACGAACAAAGTCCATGCCATTCCACT
GCGATCCTCGTGGGTGATGACCTGTGCGTACGCCCCATCCGGTAGCTATG
TGGCCTGCGGTGGCCTCGACAACATGTGTTCAATTTACAACCTAAAGACG
CGCGAGGGCAACGTCCGGGTGTCCCGTGAGCTGCCCGGCCATGGTGGCTA
TCTATCGTGCTGCCGCTTCCTGGACGACAATCAGATCGTGACCAGCTCCG
GTGATATGTCGTGCGGATTGTGGGATATCGAGACGGGACTGCAGGTAACC
TCGTTTTTGGGCCACACCGGCGATGTGATGGCCCTCTCACTGGCGCCCCA
ATGCAAAACGTTCGTATCCGGCGCCTGCGATGCGTCCGCCAAGCTATGGG
ACATCCGGGAGGGTGTCTGTAAACAAACCTTCCCCGGCCACGAATCCGAT
ATCAATGCGGTCACATTTTTCCCGAATGGTCAGGCATTCGCCACCGGTTC
GGACGACGCAACCTGTCGATTGTTCGATATCCGTGCCGATCAGGAGTTGG
CCATGTATTCGCACGACAACATCATATGCGGCATCACATCGGGTGCATTC
TCGAAGAGCGGACGTCTGTTATTAGCGGGCTACGATGATTTNCACTGCAA
TGTATGGGACACGATG

BO08515.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:25:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG10545-PB 1023 Gbeta13F-RB 1..900 17..916 4406 99.5 Plus
CG10545-PA 1023 Gbeta13F-RA 1..900 17..916 4406 99.5 Plus
CG10545-PC 1023 Gbeta13F-RC 1..900 17..916 4406 99.5 Plus
CG10545-PD 1023 Gbeta13F-RD 1..900 17..916 4406 99.5 Plus
CG10545-PE 1023 Gbeta13F-RE 1..900 17..916 4406 99.5 Plus
CG10545-PF 1023 Gbeta13F-RF 1..900 17..916 4406 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:47:40
Subject Length Description Subject Range Query Range Score Percent Strand
Gbeta13F-RH 5178 CG10545-RH 868..1767 17..916 4444 99.6 Plus
Gbeta13F-RG 4765 CG10545-RG 455..1354 17..916 4444 99.6 Plus
Gbeta13F-RF 5080 CG10545-RF 770..1669 17..916 4444 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:47:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15861774..15862673 17..916 4444 99.6 Plus
Blast to na_te.dros performed on 2015-02-12 05:47:37 has no hits.

BO08515.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:49:10 Download gff for BO08515.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10545-PF 1..900 17..916 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:44:41 Download gff for BO08515.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10545-PF 1..900 17..916 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:59:13 Download gff for BO08515.5prime
Subject Subject Range Query Range Percent Splice Strand
Gbeta13F-RE 1003..1910 7..916 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:54:54 Download gff for BO08515.5prime
Subject Subject Range Query Range Percent Splice Strand
Gbeta13F-RF 762..1669 7..916 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:54:54 Download gff for BO08515.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15861766..15862673 7..916 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:59:13 Download gff for BO08515.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15755799..15756706 7..916 99   Plus

BO08515.complete Sequence

1054 bp (1054 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631223

> BO08515.complete
GAAGTTATCAGTCGACATGAATGAACTAGACAGTCTCAGGCAGGAAGCCG
AGTCCCTAAAGAACGCCATTCGGGATGCCCGGAAGGCGGCCTGCGACACA
TCACTGTTGCAAGCGGCCACCTCGCTGGAACCCATCGGCCGCATACAGAT
GCGCACCCGTCGTACATTACGCGGCCATTTGGCGAAAATCTACGCCATGC
ATTGGGGCAACGATTCAAGGAATCTCGTATCAGCCTCACAGGACGGCAAA
CTGATCGTTTGGGACTCGCATACCACGAACAAAGTCCATGCCATTCCACT
GCGATCCTCGTGGGTGATGACCTGTGCGTACGCCCCATCCGGTAGCTATG
TGGCCTGCGGTGGCCTCGACAACATGTGTTCAATTTACAACCTAAAGACG
CGCGAGGGCAACGTCCGGGTGTCCCGTGAGCTGCCCGGCCATGGTGGCTA
TCTATCGTGCTGCCGCTTCCTGGACGACAATCAGATCGTGACCAGCTCCG
GTGATATGTCGTGCGGATTGTGGGATATCGAGACGGGACTGCAGGTAACC
TCGTTTTTGGGCCACACCGGCGATGTGATGGCCCTCTCACTGGCGCCCCA
ATGCAAAACGTTCGTATCCGGCGCCTGCGATGCGTCCGCCAAGCTATGGG
ACATCCGGGAGGGTGTCTGTAAACAAACCTTCCCCGGCCACGAATCCGAT
ATCAATGCGGTCACATTTTTCCCGAATGGTCAGGCATTCGCCACCGGTTC
GGACGACGCAACCTGTCGATTGTTCGATATCCGTGCCGATCAGGAGTTGG
CCATGTATTCGCACGACAACATCATATGCGGCATCACATCGGTGGCATTC
TCGAAGAGCGGACGTCTGTTATTAGCGGGCTACGATGATTTCAACTGCAA
TGTATGGGACACGATGAAGGCAGAACGGTCTGGCATACTCGCTGGCCACG
ACAACCGTGTATCCTGTTTGGGTGTCACCGAGAACGGCATGGCGGTGGCA
ACAGGATCGTGGGACTCCTTCTTGCGTGTATGGAACGCAAGCTTTCTAGA
CCAT

BO08515.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
Gbeta13F-RH 1023 CG10545-PH 1..1020 17..1036 5100 100 Plus
Gbeta13F-RG 1023 CG10545-PG 1..1020 17..1036 5100 100 Plus
Gbeta13F-RF 1023 CG10545-PF 1..1020 17..1036 5100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:49:03
Subject Length Description Subject Range Query Range Score Percent Strand
Gbeta13F-RH 5178 CG10545-RH 868..1887 17..1036 5100 100 Plus
Gbeta13F-RG 4765 CG10545-RG 455..1474 17..1036 5100 100 Plus
Gbeta13F-RF 5080 CG10545-RF 770..1789 17..1036 5100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:48:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15861774..15862793 17..1036 5100 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:49:00 has no hits.

BO08515.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:57 Download gff for BO08515.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta13F-RC 1..1023 17..1040 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:32:48 Download gff for BO08515.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta13F-RC 667..1697 7..1040 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:30 Download gff for BO08515.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta13F-RE 1011..2030 17..1038 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:57 Download gff for BO08515.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta13F-RC 667..1697 7..1040 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:39 Download gff for BO08515.complete
Subject Subject Range Query Range Percent Splice Strand
Gbeta13F-RF 770..1789 17..1038 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:39 Download gff for BO08515.complete
Subject Subject Range Query Range Percent Splice Strand
X 15861774..15862793 17..1038 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:30 Download gff for BO08515.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15755807..15756826 17..1038 99   Plus

BO08515.pep Sequence

Translation from 16 to 1054

> BO08515.pep
MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRT
LRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWV
MTCAYAPSGSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCR
FLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFV
SGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATC
RLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTM
KAERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVWNASFLDH

BO08515.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:13:29
Subject Length Description Subject Range Query Range Score Percent Strand
Gbeta13F-PH 340 CG10545-PH 1..340 1..340 1813 100 Plus
Gbeta13F-PG 340 CG10545-PG 1..340 1..340 1813 100 Plus
Gbeta13F-PF 340 CG10545-PF 1..340 1..340 1813 100 Plus
Gbeta13F-PE 340 CG10545-PE 1..340 1..340 1813 100 Plus
Gbeta13F-PC 340 CG10545-PC 1..340 1..340 1813 100 Plus