Clone BO08537 Report

Search the DGRC for BO08537

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:85
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG7777-RB
Protein status:BO08537.pep: validated full length
Sequenced Size:838

Clone Sequence Records

BO08537.3prime Sequence

836 bp (774 high quality bases) assembled on 2006-01-06

> BO08537.3prime
ATGGTCTAGAAAGCTTGCGTAGAAGGACTCCTCGCTCCAGGCGCTTATCA
ACCTGACTCTCACCTCGCGTTCATCGGCGTGCGTTCGGTACTTCTCGGAT
GCCTCGTTAACCTTTGGCACGGGCTTCGCCTCCAGGACCTGGGTGTAGAG
CAGGGCGGCAGCCACGCCCCCCAGCACAGGTCCCACCCAGTATACCCAAT
GCGACGCCCAGATGTCGGTGGCAAAGGCGGTGCCCACGGTGCGAGCGGGA
TTCATGCTGGCCCCGGTGTAGCGGATGGTGCCCAAGTGACCCAGGGTCAC
CGCCATTCCGATGGCCAAGGGCGCCGTGTAGCGGGAATCGGGCTTGTGGG
GATCACAGGCCCCAAAGACGACGAGCACCAGCAGGAGTCCCAGGAAGAAC
TCGATTCCCAGGCCCTGCAGCTCGGTGATATTGGGCGCCAGAGAGGTGTG
ACCCAGGCCATTGTAATAGTCCTGATCGATGAGAATCTTAACCGCTGCAG
TTCCGGCAATTGCACCCAAGCACTGGAAAACCACATAGAAAAAGGCTCTG
ATCAAGCTAATTCGTCCTGCGACCAACATTCCAGCGGTAACGGCAGGATT
CACATGACCACCACTCAAGTGGCCCACAATCGTGATGGCCATGAAGATAG
CCAGGCCAAAAGCCAAGGCCTTGAAGGTGCCATCCTCAATTTGGGTGCAT
GCGCCGCAGGCAAAGAAATTGAGGATCAAATTGCCAAGGAATTCTCCAAT
CAAGGCCTGCCACAATCGCAGCTCCTTGGATTTGAGCTCATTGAGACCCA
GTGAGTATTCGAATTTTCCCATGTCGACTGATAACT

BO08537.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-PB 807 CG7777-RB 1..804 822..19 4020 100 Minus
CG7777-PA 795 CG7777-RA 1..759 822..64 3795 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:44:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-RB 1386 CG7777-RB 216..1019 822..19 4020 100 Minus
CG7777-RC 1479 CG7777-RC 216..975 822..63 3800 100 Minus
CG7777-RD 1388 CG7777-RD 216..974 822..64 3795 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:44:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11441066..11441535 488..19 2350 100 Minus
2R 25286936 2R 11439968..11440125 788..631 790 100 Minus
2R 25286936 2R 11440186..11440330 631..487 725 100 Minus
Blast to na_te.dros performed on 2015-02-12 18:44:39 has no hits.

BO08537.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:49:50 Download gff for BO08537.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-PB 1..807 16..822 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:45:37 Download gff for BO08537.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-PB 1..807 16..822 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:14:27 Download gff for BO08537.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 211..1019 19..829 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:18:27 Download gff for BO08537.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 211..1019 19..829 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:18:27 Download gff for BO08537.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 11439970..11440125 631..786 100 -> Minus
2R 11440187..11440330 487..630 100 -> Minus
2R 11441068..11441535 19..486 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:14:27 Download gff for BO08537.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7327475..7327630 631..786 100 -> Minus
arm_2R 7327692..7327835 487..630 100 -> Minus
arm_2R 7328573..7329040 19..486 100   Minus

BO08537.5prime Sequence

836 bp (818 high quality bases) assembled on 2006-01-06

> BO08537.5prime
GAAGTTATCAGTCGACATGGGAAAATTCGAATACTCACTGGGTCTCAATG
AGCTCAAATCCAAGGAGCTGCGATTGTGGCAGGCCTTGATTGGAGAATTC
CTTGGCAATTTGATCCTCAATTTCTTTGCCTGCGGCGCATGCACCCAAAT
TGAGGATGGCACCTTCAAGGCCTTGGCTTTTGGCCTGGCTATCTTCATGG
CCATCACGATTGTGGGCCACTTGAGTGGTGGTCATGTGAATCCTGCCGTT
ACCGCTGGAATGTTGGTCGCAGGACGAATTAGCTTGATCAGAGCCTTTTT
CTATGTGGTTTTCCAGTGCTTGGGTGCAATTGCCGGAACTGCAGCGGTTA
AGATTCTCATCGATCAGGACTATTACAATGGCCTGGGTCACACCTCTCTG
GCGCCCAATATCACCGAGCTGCAGGGCCTGGGAATCGAGTTCTTCCTGGG
ACTCCTGCTGGTGCTCGTCGTCTTTGGGGCCTGTGATCCCCACAAGCCCG
ATTCCCGCTACACGGCGCCCTTGGCCATCGGAATGGCGGTGACCCTGGGT
CACTTGGGCACCATCCGCTACACCGGGGCCAGCATGAATCCCGCTCGCAC
CGTGGGCACCGCCTTTGCCACCGACATCTGGGCGTCGCATTGGGTATACT
GGGTGGGACCTGTGCTGGGGGGCGTGGCTGCCGCCCTGCTCTACACCCAG
GTCCTGGAGGCGAAGCCCGTGCCAAAGGTTAACGAGGCATCCGAGAAGTA
CCGAACGCACGCCGATGAACGCGAGGTGAGAGTCAGGTTGATAAGCGCCT
GGAGCGAGGAGTCCTTCTACGCAAGCTTTCTAGACC

BO08537.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:26:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-PB 807 CG7777-RB 1..804 17..820 4020 100 Plus
CG7777-PA 795 CG7777-RA 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:14:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-RB 1386 CG7777-RB 216..1019 17..820 4020 100 Plus
CG7777-RC 1479 CG7777-RC 216..975 17..776 3800 100 Plus
CG7777-RD 1388 CG7777-RD 216..974 17..775 3795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:14:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11441066..11441535 351..820 2350 100 Plus
2R 25286936 2R 11439968..11440125 51..208 790 100 Plus
2R 25286936 2R 11440186..11440330 208..352 725 100 Plus
Blast to na_te.dros performed on 2015-02-11 11:14:03 has no hits.

BO08537.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:49:51 Download gff for BO08537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-PB 1..807 17..823 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:45:39 Download gff for BO08537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-PB 1..807 17..823 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:14:36 Download gff for BO08537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 211..1019 10..820 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:43:59 Download gff for BO08537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 211..1019 10..820 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:43:59 Download gff for BO08537.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11439970..11440125 53..208 100 -> Plus
2R 11440187..11440330 209..352 100 -> Plus
2R 11441068..11441535 353..820 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:14:36 Download gff for BO08537.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7327475..7327630 53..208 100 -> Plus
arm_2R 7327692..7327835 209..352 100 -> Plus
arm_2R 7328573..7329040 353..820 100   Plus

BO08537.complete Sequence

838 bp (838 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631229

> BO08537.complete
GAAGTTATCAGTCGACATGGGAAAATTCGAATACTCACTGGGTCTCAATG
AGCTCAAATCCAAGGAGCTGCGATTGTGGCAGGCCTTGATTGGAGAATTC
CTTGGCAATTTGATCCTCAATTTCTTTGCCTGCGGCGCATGCACCCAAAT
TGAGGATGGCACCTTCAAGGCCTTGGCTTTTGGCCTGGCTATCTTCATGG
CCATCACGATTGTGGGCCACTTGAGTGGTGGTCATGTGAATCCTGCCGTT
ACCGCTGGAATGTTGGTCGCAGGACGAATTAGCTTGATCAGAGCCTTTTT
CTATGTGGTTTTCCAGTGCTTGGGTGCAATTGCCGGAACTGCAGCGGTTA
AGATTCTCATCGATCAGGACTATTACAATGGCCTGGGTCACACCTCTCTG
GCGCCCAATATCACCGAGCTGCAGGGCCTGGGAATCGAGTTCTTCCTGGG
ACTCCTGCTGGTGCTCGTCGTCTTTGGGGCCTGTGATCCCCACAAGCCCG
ATTCCCGCTACACGGCGCCCTTGGCCATCGGAATGGCGGTGACCCTGGGT
CACTTGGGCACCATCCGCTACACCGGGGCCAGCATGAATCCCGCTCGCAC
CGTGGGCACCGCCTTTGCCACCGACATCTGGGCGTCGCATTGGGTATACT
GGGTGGGACCTGTGCTGGGGGGCGTGGCTGCCGCCCTGCTCTACACCCAG
GTCCTGGAGGCGAAGCCCGTGCCAAAGGTTAACGAGGCATCCGAGAAGTA
CCGAACGCACGCCGATGAACGCGAGGTGAGAGTCAGGTTGATAAGCGCCT
GGAGCGAGGAGTCCTTCTACGCAAGCTTTCTAGACCAT

BO08537.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:43:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-RB 807 CG7777-PB 1..804 17..820 4020 100 Plus
CG7777-RC 813 CG7777-PC 1..760 17..776 3800 100 Plus
CG7777-RD 780 CG7777-PD 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:43:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-RB 1386 CG7777-RB 216..1019 17..820 4020 100 Plus
CG7777-RC 1479 CG7777-RC 216..975 17..776 3800 100 Plus
CG7777-RD 1388 CG7777-RD 216..974 17..775 3795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:43:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11441066..11441535 351..820 2350 100 Plus
2R 25286936 2R 11439968..11440125 51..208 790 100 Plus
2R 25286936 2R 11440186..11440330 208..352 725 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:43:02 has no hits.

BO08537.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:48 Download gff for BO08537.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 1..807 17..823 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:04:32 Download gff for BO08537.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 208..1016 10..820 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:28 Download gff for BO08537.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 216..1019 17..822 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:49 Download gff for BO08537.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 208..1016 10..820 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:25:10 Download gff for BO08537.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 216..1019 17..822 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:25:10 Download gff for BO08537.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11439833..11439868 17..52 100 -> Plus
2R 11439970..11440125 53..208 100 -> Plus
2R 11440187..11440330 209..352 100 -> Plus
2R 11441068..11441535 353..822 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:28 Download gff for BO08537.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7327338..7327373 17..52 100 -> Plus
arm_2R 7327475..7327630 53..208 100 -> Plus
arm_2R 7327692..7327835 209..352 100 -> Plus
arm_2R 7328573..7329040 353..822 99   Plus

BO08537.pep Sequence

Translation from 16 to 838

> BO08537.pep
MGKFEYSLGLNELKSKELRLWQALIGEFLGNLILNFFACGACTQIEDGTF
KALAFGLAIFMAITIVGHLSGGHVNPAVTAGMLVAGRISLIRAFFYVVFQ
CLGAIAGTAAVKILIDQDYYNGLGHTSLAPNITELQGLGIEFFLGLLLVL
VVFGACDPHKPDSRYTAPLAIGMAVTLGHLGTIRYTGASMNPARTVGTAF
ATDIWASHWVYWVGPVLGGVAAALLYTQVLEAKPVPKVNEASEKYRTHAD
EREVRVRLISAWSEESFYASFLDH

BO08537.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:13:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-PB 268 CG7777-PB 1..268 1..268 1388 100 Plus
CG7777-PA 264 CG7777-PA 1..255 1..255 1318 99.6 Plus
CG7777-PD 259 CG7777-PD 1..256 1..256 1314 98.8 Plus
CG7777-PC 270 CG7777-PC 1..253 1..253 1312 100 Plus
Drip-PE 239 CG9023-PE 1..228 1..233 473 40.4 Plus