Clone Sequence Records
BO08593.3prime Sequence
911 bp (866 high quality bases) assembled on 2006-01-06
> BO08593.3prime
ATGGTCTAGAAAGCTTGCCAGCCGCCACAGGCGACTGCTGTTGCCTCCGA
TGGCGCCCTCAGCCTCGCCGCGCAGCTTGTTGTCGTCGGTGCGCCAGACG
AAGGGCTCCAGGCGGTCCTCGTCGTCCAGGAAGTTATTGATCGCCTCCAG
ACTGGCTATGTTCTCGTGCAGCAGCGAGTTGCATCTGCTCAGCTGATGCG
ATATGCTCCGAATCTTGGCGAATTGCTCGGCGTACGAGGCGTACGTCTTC
TGCATGTCCACGAATCCGGCAAAGAGGGTGGTGATCGAGTTGCTCACCAC
CTTGGTACGTTCCACGAGGTGATTCTGTTCGCTGGCCACATAGCTGGCGC
ACAGATTAAGATGTGTTTGCATGCGGGTACATATGTTGATCAAATGCTGC
GAGTTTAGTCGCTCCAGAATCTCTGCATCTCGTGTATTGGTCGCCGACGT
GATGGATTCACGGAGCACGGGCAGAAACTGCGGTATATTGCGCAATCGTG
CCAAGTCCATGTCCACATCCTCGCCAGCATCGATGGCACCGGGACGCACA
ATCACTATATTATGACTAGAGGCCGTGGACTGTGGTCGCTTCGGTTTCAC
GGCGCTGGTGAGTCCACTCGGATGTGACTTCCTGGCCGCCGCACGGCTGG
CGCTGCTCTGCTGGAGCATATGCGCCGGCTTGCTGCGTATCTTGGGCGAA
TCACCGATTGGCCGATCTGTATAGGACACATATGGCAGGTCGGAGCAGAC
GCTAAGCGGCGGCGAAGGCGGTCTGCTCAGTTCGGAGCCGCCGGGCGAAG
CGGCCTCGGCGATGATCTGCTTGCTAGCTATCACAATGCTAGCTGGGCCC
ACTCCAGCTCCCGGGCCCACCACTGTTCCGCCTGCTCCTCCTGTCGTCTG
CTGGCGATGAC
BO08593.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:27:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11802-PA | 1050 | CG11802-RA | 155..1047 | 911..19 | 4465 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:08:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11802-RA | 1481 | CG11802-RA | 388..1280 | 911..19 | 4465 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:08:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11871500..11872392 | 19..911 | 4465 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:08:31 has no hits.
BO08593.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:51:27 Download gff for
BO08593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-PA | 155..1050 | 18..911 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:47:53 Download gff for
BO08593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-PA | 155..1050 | 18..911 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:34:03 Download gff for
BO08593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 388..1280 | 19..911 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:42:07 Download gff for
BO08593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 388..1280 | 19..911 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:42:07 Download gff for
BO08593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11871500..11872392 | 19..911 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:34:03 Download gff for
BO08593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11765533..11766425 | 19..911 | 100 | | Plus |
BO08593.5prime Sequence
892 bp (777 high quality bases) assembled on 2006-01-06
> BO08593.5prime
GAAGTTATCAGTCGACATGGGCGCCGAGCATTCGCAGCAGCGGGCTGAGG
CCGATGGCCACGAGATCTTCGACGGACGCCAGCCACCAGGAGCGGGCACT
GGATCCCTCGGCGATGGCAGCTCCATGATGCTGGCGGCCACGGCGGCGGC
CAACAAACGACGCGGAGTTGGTCATCGCCAGCAGACGACAGGAGGAGCAG
GCGGAACAGTGGTGGGCCCGGGAGCTGGAGTGGGCCCAGCTAGCATTGTG
ATAGCTAGCAAGCAGATCATCGCCGAGGCCGCTTCGCCCGGCGGCTCCGA
ACTGAGCAGACCGCCTTCGCCGCCGCTTAGCGTCTGCTCCGACCTGCCAT
ATGTGTCCTATACAGATCGGCCAATCGGTGATTCGCCCAAGATACGCAGC
AAGCCGGCGCATATGCTCCAGCAGAGCAGCGCCAGCCGTGCGGCGGCCAG
GAAGTCACATCCGAGTGGACTCACCAGCGCCGTGAAACCGAAGCGACCAC
AGTCCACGGCCTCTAGTCATAATATAGTGATTGTGCGTCCCGGTGCCATC
GATGCTGGCGAGGATGTGGACATGGACTTGGCACGATTGCGCAATATACC
GCAGTTTCTGCCCGTGCTCCGTGAATCCATCACGTCGGCGACCAATACAC
GAGATGCAGAGATTCTGGAGCGACTAAACTCGCAGCATTTGATCAACATA
TGTACCCGCATGCAAACACATCTTAATCTGTGCGCCAGCTATGTGGCCAG
CGAACAGAATCACCTCGTGGAACGTACCAAGGTGGTGAGCAACTCGATCA
CCACCCTCTTTGCCGGATTCGTGGACATGCAGAAGACGTACGCCTCGTAC
GCCGAGCAATTCGCCCAGATTCGGAGCATATCGCATCAGCTG
BO08593.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:27:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11802-PA | 1050 | CG11802-RA | 1..876 | 17..892 | 4355 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:05:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11802-RA | 1481 | CG11802-RA | 234..1109 | 17..892 | 4365 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:04:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11871671..11872546 | 892..17 | 4365 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 18:04:57 has no hits.
BO08593.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:51:28 Download gff for
BO08593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-PA | 1..876 | 17..892 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:47:55 Download gff for
BO08593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-PA | 1..876 | 17..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:24:03 Download gff for
BO08593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 234..1109 | 17..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:28:32 Download gff for
BO08593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 234..1109 | 17..892 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:28:32 Download gff for
BO08593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11871671..11872546 | 17..892 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:24:03 Download gff for
BO08593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11765704..11766579 | 17..892 | 99 | | Minus |
BO08593.complete Sequence
1081 bp (1081 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ631253
> BO08593.complete
GAAGTTATCAGTCGACATGGGCGCCGAGCATTCGCAGCAGCGGGCTGAGG
CCGATGGCCACGAGATCTTCGACGGACGCCAGCCACCAGGAGCGGGCACT
GGATCCCTCGGCGATGGCAGCTCCATGATGCTGGCGGCCACGGCGGCGGC
CAACAAACGACGCGGAGTTGGTCATCGCCAGCAGACGACAGGAGGAGCAG
GCGGAACAGTGGTGGGCCCGGGAGCTGGAGTGGGCCCAGCTAGCATTGTG
ATAGCTAGCAAGCAGATCATCGCCGAGGCCGCTTCGCCCGGCGGCTCCGA
ACTGAGCAGACCGCCTTCGCCGCCGCTTAGCGTCTGCTCCGACCTGCCAT
ATGTGTCCTATACAGATCGGCCAATCGGTGATTCGCCCAAGATACGCAGC
AAGCCGGCGCATATGCTCCAGCAGAGCAGCGCCAGCCGTGCGGCGGCCAG
GAAGTCACATCCGAGTGGACTCACCAGCGCCGTGAAACCGAAGCGACCAC
AGTCCACGGCCTCTAGTCATAATATAGTGATTGTGCGTCCCGGTGCCATC
GATGCTGGCGAGGATGTGGACATGGACTTGGCACGATTGCGCAATATACC
GCAGTTTCTGCCCGTGCTCCGTGAATCCATCACGTCGGCGACCAATACAC
GAGATGCAGAGATTCTGGAGCGACTAAACTCGCAGCATTTGATCAACATA
TGTACCCGCATGCAAACACATCTTAATCTGTGCGCCAGCTATGTGGCCAG
CGAACAGAATCACCTCGTGGAACGTACCAAGGTGGTGAGCAACTCGATCA
CCACCCTCTTTGCCGGATTCGTGGACATGCAGAAGACGTACGCCTCGTAC
GCCGAGCAATTCGCCAAGATTCGGAGCATATCGCATCAGCTGAGCAGATG
CAACTCGCTGCTGCACGAGAACATAGCCAGTCTGGAGGCGATCAATAACT
TCCTGGACGACGAGGACCGCCTGGAGCCCTTCGTCTGGCGCACCGACGAC
AACAAGCTGCGCGGCGAGGCTGAGGGCGCCATCGGAGGCAACAGCAGTCG
CCTGTGGCGGCTGGCAAGCTTTCTAGACCAT
BO08593.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:20:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11802-RA | 1050 | CG11802-PA | 1..1047 | 17..1063 | 5235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:20:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11802-RA | 1481 | CG11802-RA | 234..1280 | 17..1063 | 5235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:20:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11871500..11872546 | 1063..17 | 5235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:20:45 has no hits.
BO08593.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:30 Download gff for
BO08593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 1..1050 | 17..1064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:32:18 Download gff for
BO08593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 233..1279 | 17..1063 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:30 Download gff for
BO08593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 234..1280 | 17..1065 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:30 Download gff for
BO08593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 233..1279 | 17..1063 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:09:14 Download gff for
BO08593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 234..1280 | 17..1065 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:09:14 Download gff for
BO08593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11871498..11872546 | 17..1065 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:30 Download gff for
BO08593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11765531..11766579 | 17..1065 | 99 | | Minus |
BO08593.pep Sequence
Translation from 16 to 1081
> BO08593.pep
MGAEHSQQRAEADGHEIFDGRQPPGAGTGSLGDGSSMMLAATAAANKRRG
VGHRQQTTGGAGGTVVGPGAGVGPASIVIASKQIIAEAASPGGSELSRPP
SPPLSVCSDLPYVSYTDRPIGDSPKIRSKPAHMLQQSSASRAAARKSHPS
GLTSAVKPKRPQSTASSHNIVIVRPGAIDAGEDVDMDLARLRNIPQFLPV
LRESITSATNTRDAEILERLNSQHLINICTRMQTHLNLCASYVASEQNHL
VERTKVVSNSITTLFAGFVDMQKTYASYAEQFAKIRSISHQLSRCNSLLH
ENIASLEAINNFLDDEDRLEPFVWRTDDNKLRGEAEGAIGGNSSRLWRLA
SFLDH
BO08593.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:14:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11802-PA | 349 | CG11802-PA | 1..349 | 1..349 | 1781 | 100 | Plus |
