Clone Sequence Records
BO08632.3prime Sequence
599 bp (598 high quality bases) assembled on 2006-01-09
> BO08632.3prime
ATGGTCTAGAAAGCTTGCCTGCTCCATTTCCAGGCCGAAAGTGGCCCGCA
TCCGCTCGAGTGTGGCGGCGGGATATCCCCGCTCGAGCAGCTGCCTCTCC
GCCTGGGCAATCACATCCCGCATCGTGTCCAACATGACGGCGCTCTTCTT
CAGCTGCCCGCTGACGAATTTGTGCCGGAAGCGCAGCTTGGCCTTCTTGA
TCTTGTTGTTGTAGCGGGATTTGCGGCACGACTCGGCCCTCTGACGCTGG
GCATCCTTGACATCCGAACCAGAACCGGAACCTGATCCGGAACCCGATCC
GCGGCAATCCATAGCAAGCTCCGTTTTCAGCGGCGGCGGTGCACGGCGCT
CCACAACAATGGGATTCTCCAGGAGCATCTGGTCTACGTAGCGTTGCTCC
TCGTCGGCGTAGTGCATTTTGAGATGATGCAGCTGCTGGGACACCAGCTC
CTCGATCTGCTCCGGCTTCGATGATGTTGACGATGCTGTCGATAGTGCGG
GTGAACTGCTTCCGCGATACGGTGCGTATACGTGACCCATGGCCGCGTAG
CTCAGAGTGGGCAAGTAAAGATGACTCCGTTCCATGTCGACTGATAACT
BO08632.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:28:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1641-PA | 570 | sisA-RA | 1..567 | 585..19 | 2835 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:23:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sisA-RA | 779 | CG1641-RA | 67..634 | 586..19 | 2840 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:23:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11321724..11322291 | 19..586 | 2840 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:23:18 has no hits.
BO08632.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:52:04 Download gff for
BO08632.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-PA | 1..570 | 16..585 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:48:42 Download gff for
BO08632.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1641-PA | 1..570 | 16..585 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:24:37 Download gff for
BO08632.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 62..634 | 19..595 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:44:44 Download gff for
BO08632.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 62..634 | 19..595 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:44:44 Download gff for
BO08632.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11321724..11322296 | 19..595 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:24:37 Download gff for
BO08632.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11215757..11216329 | 19..595 | 99 | | Plus |
BO08632.5prime Sequence
599 bp (598 high quality bases) assembled on 2006-01-09
> BO08632.5prime
GAAGTTATCAGTCGACATGGAACGGAGTCATCTTTACTTGCCCACTCTGA
GCTACGCGGCCATGGGTCACGTATACGCACCGTATCGCGGAAGCAGTTCA
CCCGCACTATCGACAGCATCGTCAACATCATCGAAGCCGGAGCAGATCGA
GGAGCTGGTGTCCCAGCAGCTGCATCATCTCAAAATGCACTACGCCGACG
AGGAGCAACGCTACGTAGACCAGATGCTCCTGGAGAATCCCATTGTTGTG
GAGCGCCGTGCACCGCCGCCGCTGAAAACGGAGCTTGCTATGGATTGCCG
CGGATCGGGTTCCGGATCAGGTTCCGGTTCTGGTTCGGATGTCAAGGATG
CCCAGCGTCAGAGGGCCGAGTCGTGCCGCAAATCCCGCTACAACAACAAG
ATCAAGAAGGCCAAGCTGCGCTTCCGGCACAAATTCGTCAGCGGGCAGCT
GAAGAAGAGCGCCGTCATGTTGGACACGATGCGGGATGTGATTGCCCAGG
CGGAGAGGCAGCTGCTCGAGCGGGGATATCCCGCCGCCACACTCGAGCGG
ATGCGGGCCACTTTCGGCCTGGAAATGGAGCAGGCAAGCTTTCTAGACC
BO08632.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:28:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1641-PA | 570 | sisA-RA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:55:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sisA-RA | 779 | CG1641-RA | 67..634 | 16..583 | 2840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:55:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11321724..11322291 | 583..16 | 2840 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 12:55:56 has no hits.
BO08632.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:52:05 Download gff for
BO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-PA | 1..570 | 17..586 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:48:44 Download gff for
BO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1641-PA | 1..570 | 17..586 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:27:44 Download gff for
BO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 62..634 | 7..583 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:03:24 Download gff for
BO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 62..634 | 7..583 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:03:24 Download gff for
BO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11321724..11322296 | 7..583 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:27:44 Download gff for
BO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11215757..11216329 | 7..583 | 99 | | Minus |
BO08632.complete Sequence
601 bp assembled on 2008-10-21
GenBank Submission: KX798282
> BO08632.complete
GAAGTTATCAGTCGACATGGAACGGAGTCATCTTTACTTGCCCACTCTGA
GCTACGCGGCCATGGGTCACGTATACGCACCGTATCGCGGAAGCAGTTCA
CCCGCACTATCGACAGCATCGTCAACATCATCGAAGCCGGAGCAGATCGA
GGAGCTGGTGTCCCAGCAGCTGCATCATCTCAAAATGCACTACGCCGACG
AGGAGCAACGCTACGTAGACCAGATGCTCCTGGAGAATCCCATTGTTGTG
GAGCGCCGTGCACCGCCGCCGCTGAAAACGGAGCTTGCTATGGATTGCCG
CGGATCGGGTTCCGGATCAGGTTCCGGTTCTGGTTCGGATGTCAAGGATG
CCCAGCGTCAGAGGGCCGAGTCGTGCCGCAAATCCCGCTACAACAACAAG
ATCAAGAAGGCCAAGCTGCGCTTCCGGCACAAATTCGTCAGCGGGCAGCT
GAAGAAGAGCGCCGTCATGTTGGACACGATGCGGGATGTGATTGCCCAGG
CGGAGAGGCAGCTGCTCGAGCGGGGATATCCCGCCGCCACACTCGAGCGG
ATGCGGGCCACTTTCGGCCTGGAAATGGAGCAGGCAAGCTTTCTAGACCA
T
BO08632.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:58:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sisA-RA | 570 | CG1641-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sisA-RA | 779 | CG1641-RA | 67..634 | 16..583 | 2840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11321724..11322291 | 583..16 | 2840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:58:01 has no hits.
BO08632.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:54:58 Download gff for
BO08632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 51..623 | 7..583 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:06:52 Download gff for
BO08632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 68..634 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-21 15:42:15 Download gff for
BO08632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 57..623 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:08:16 Download gff for
BO08632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sisA-RA | 68..634 | 17..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:08:16 Download gff for
BO08632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11321721..11322290 | 17..585 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:06:52 Download gff for
BO08632.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11215754..11216323 | 17..585 | 99 | | Minus |
BO08632.pep Sequence
Translation from 16 to 601
> BO08632.pep
MERSHLYLPTLSYAAMGHVYAPYRGSSSPALSTASSTSSKPEQIEELVSQ
QLHHLKMHYADEEQRYVDQMLLENPIVVERRAPPPLKTELAMDCRGSGSG
SGSGSGSDVKDAQRQRAESCRKSRYNNKIKKAKLRFRHKFVSGQLKKSAV
MLDTMRDVIAQAERQLLERGYPAATLERMRATFGLEMEQASFLDH
BO08632.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:04:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sisA-PA | 189 | CG1641-PA | 1..189 | 1..189 | 960 | 100 | Plus |
