Clone Sequence Records
BO08639.3prime Sequence
947 bp (762 high quality bases) assembled on 2006-01-09
> BO08639.3prime
ATGGTCTAGAAAGCTTGCGTTGCCACTCCCTGTGGCCGTCTTGAGAACCG
TAGCCGGTATTAGTTTTGTAGTCAGCGTTTTTGCTCCTGTTTCGCCGGCT
GCCGTGGTCACAGAGATTTTTCCTCCTACCGCTGCCCCACTTGCCGATGC
TGCAGCCATGGGTATCACTTTTAAGCTGGACAGTGGCTTTAGGTTCATGC
CCTGCAGTCCCGGTGAGAAGAAGAGCTGTCCGCCGTTGCCTTGCACGGCG
AAAACGAGATTGTTGCTAGGCGTTGCCGTCGCTGTCGCAGCTGGAGATGC
TGTCGTGGAGCTGTTTACAACGCTGCTGTTTGCTGTACTAGTGATTTGCT
TGTTGGCCACCAGTACGTTCTTGGCCAAGCGCGGTCCTATTAGCAGCGTT
TTGGGTGCCGTCGTTATGCCGCTGGTGGAAGTAGTTCCACTATTACTGGT
GCTACTGGCTAATCGCAACAGTTGGTTGCCCATAATGACAGTCTGAACGG
GTGCGCCGGCACCTCGAGCGGAAATCGCTCCCTGAAGCTTCACTGTCTGA
CCTCCAATCACAATATTCTGAGTTGTTCGCCCGGCAGCATTAGTCGCTCC
CGTTCCCGCAACTACAGTTCCACCTGCTCCACTGCCGCTTCCCACTGCCG
CTGATGCAACTGCTGTTGTCGTCGTTGTGGTAGTCTGGGTTGTGGGCACA
CTACTACCGCCAATCTGTTTTAATGTTTTGGCGTGGAGTAGTAGTGGTTT
TCCCGGAAGCACAGTAGTTTTTCCAATAATTTTGGGCACCACAGTCGACG
CGTTTCCAGTTGCCGGAGTAGTACTGGTGGCACTCACAATTCGTGTCATC
GTGGGTAACTGCTTGGTCGTCTGGTTGGGACTAAGTGTAATCACATTTTC
CCGCCGAGGAAGTGGCCAACTGGAAGAAGTTGTTGCCAGCGGTTGTG
BO08639.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:28:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11970-PA | 4977 | CG11970-RA | 4095..4974 | 898..19 | 4400 | 100 | Minus |
CG11970-PA | 4977 | CG11970-RA | 4047..4097 | 947..897 | 230 | 98 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:38:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11970-RB | 5607 | CG11970-RB | 4426..5353 | 947..19 | 4605 | 99.8 | Minus |
CG11970-RA | 5397 | CG11970-RA | 4216..5143 | 947..19 | 4605 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:38:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8989888..8990395 | 526..19 | 2540 | 100 | Minus |
3R | 32079331 | 3R | 8989404..8989824 | 947..526 | 2045 | 99.5 | Minus |
Blast to na_te.dros performed 2015-02-11 11:38:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2790..2880 | 683..587 | 129 | 62.9 | Minus |
BO08639.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:52:16 Download gff for
BO08639.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-PA | 4047..4977 | 18..947 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:48:59 Download gff for
BO08639.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-PA | 4047..4977 | 18..947 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 07:54:38 Download gff for
BO08639.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-RA | 4216..5143 | 19..947 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:57:30 Download gff for
BO08639.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-RA | 4216..5143 | 19..947 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:57:30 Download gff for
BO08639.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8989404..8989824 | 526..947 | 99 | -> | Minus |
3R | 8989889..8990395 | 19..525 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 07:54:38 Download gff for
BO08639.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4815126..4815546 | 526..947 | 99 | -> | Minus |
arm_3R | 4815611..4816117 | 19..525 | 100 | | Minus |
BO08639.5prime Sequence
859 bp (808 high quality bases) assembled on 2006-01-09
> BO08639.5prime
GAAGTTATCAGTCGACATGAGCAACATAAACGTAAACACAGTGCCCAGGT
CGAGTCCAAATGCCAATGGGAATCCAAATGCGAATCCAAATCGCAGTGTG
GCCTCCGAGGAGGAGGAGGGCGATGGCCGGATGAGCGACAGCGGGAGCAA
CTCGGCCAGCAGCCAGCTGAGTCGCACGTCGAGCAGCAGCTCCTCGGACT
CGGCGAGTGGTTCACTGGAGGATGACCCGGATGGCGAGGACGAGGATATG
TCCGCCCAGGACGCGGGCAGCGCCTCGGAAACGGAAGACGACACCTCCAC
CTGCCAGTCGGATGAACTGGAGCTGGCGCAGCTCACTGGTCGGGATATCT
TTCGGTTGCCGCGCGGCTTGTGCGAAAATGCAGCTATTTTTCATGAATTC
TTCTCTCTTGAGACCTGGCAACAGCTGCCCCATCACCTCCAGGCCCGACT
ACAGCCGATGCTTCCGGACTTCTCCCGTTTGGTATCCGGACAGGCACAGG
CCTGTGCGGAACAGCAACGTACACTGGTGCAGCTATTTAATGGCGGTCTA
CAGCGTTTCGGGCAATCACCACTGCTTCAGCTACAACGCCAACTTGAGGA
AGGAAACCTGCGTCCCGATGTCCTTCAGTTGCGGAGGAGCATACAGCATT
CGGGCAGAAGGGAATTTCGTTTCCAGCAGGCTGAGCGCCTAAGTCTGCTA
GCCAAGGAGCTCTTTATGTCAAGGGAACAGCTACTCCAGCATGCCTACAC
CTCTGCTCCACCTTCTGATGGTGCTTTTGGTAAAAATCTGCCAAGGCCAC
GTTCCCGTAAGAGAAAAGCGCCCACACTGTCGATAGAGAACAAATTTTGT
TCGCAGCGT
BO08639.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:28:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11970-PA | 4977 | CG11970-RA | 1..843 | 17..859 | 4165 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:02:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11970-RB | 5607 | CG11970-RB | 380..1222 | 17..859 | 4185 | 99.8 | Plus |
CG11970-RA | 5397 | CG11970-RA | 170..1012 | 17..859 | 4185 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:02:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8985097..8985939 | 17..859 | 4185 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-13 08:02:08 has no hits.
BO08639.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:52:17 Download gff for
BO08639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-PA | 1..843 | 17..859 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:49:01 Download gff for
BO08639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-PA | 1..843 | 17..859 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:53:04 Download gff for
BO08639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-RA | 168..1012 | 13..859 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:05:44 Download gff for
BO08639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-RA | 168..1012 | 13..859 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:05:44 Download gff for
BO08639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8985095..8985939 | 13..859 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:53:04 Download gff for
BO08639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4810817..4811661 | 13..859 | 99 | | Plus |
BO08639.complete Sequence
5008 bp assembled on 2007-11-02
GenBank Submission: FJ631262
> BO08639.complete
GAAGTTATCAGTCGACATGAGCAACATAAACGTAAACACAGTGCCCAGGT
CGAGTCCAAATGCCAATGGGAATCCAAATGCGAATCCAAATCGCAGTGTG
GCCTCCGAGGAGGAGGAGGGCGATGGCCGGATGAGCGACAGCGGGAGCAA
CTCGGCCAGCAGCCAGCTGAGTCGCACGTCGAGCAGCAGCTCCTCGGACT
CGGCGAGTGGTTCACTGGAGGATGACCCGGATGGCGAGGACGAGGATATG
TCCGCCCAGGACGCGGGCAGCGCCTCGGAAACGGAAGACGACACCTCCAC
CTGCCAGTCGGATGAACTGGAGCTGGCGCAGCTCACTGGTCGGGATATCT
TTCGGTTGCCGCGCGGCTTGTGCGAAAATGCAGCTATTTTTCATGAATTC
TTCTCTCTTGAGACCTGGCAACAGCTGCCCCATCACCTCCAGGCCCGACT
ACAGCCGATGCTTCCGGACTTCTCCCGTTTGGTATCCGGACAGGCACAGG
CCTGTGCGGAACAGCAACGTACACTGGTGCAGCTATTTAATGGCGGTCTA
CAGCGTTTCGGGCAATCACCACTGCTTCAGCTACAACGCCAACTTGAGGA
AGGAAACCTGCGTCCCGATGTCCTTCAGTTGCGGAGGAGCATACAGCATT
CGGGCAGAAGGGAATTTCGTTTCCAGCAGGCTGAGCGCCTAAGTCTGCTA
GCCAAGGAGCTCTTTATGTCAAGGGAACAGCTACTCCAGCATGCCTACAC
CTCTGCTCCACCTTCTGATGGTGCTTTTGGTAAAAATCTGCCAAGGCCAC
GTTCCCGTAAGAGAAAGCCGCCCACACTGTCGATAGAGAACAAATTTTGT
TCGCAGCGTGCCAAGAAACGCTATGCCCAAGAGCTTCTGGAACTAATAGG
CTCGCTAGAGGCGAAACCCGGCGACATCAGTGCGGAGGAGGAGGAAGAGG
ACGAGGAATGCCGACAGCTTATGGACCGTTTGGCCAAAGGCCCACAGGAA
TTCGAATTGGAGGAGACCAAGGCTCCGGAGCCGGCAGGTCCTGGCAGGCC
CTCGAATGCGGCAGATAAGAAATGCATTTACAACACCTTCTTCAAGCGGC
GACCTGGTGTAGACGATGACCTTGTGCTGCGTTCCATGCAGGCGGAAAAA
ATTCCCAAGCTTAACGACAAGAATTTCCGGAAGTATCTAAGAGACTACAA
GCGCCGGAAATTAGAACAACCGGAAAGTCCCGAGTTCGATACATCGGAGG
TACGGCTGCGCGACATATGCACTCGAGCACAGTTTGTCGGAAGCTTTAAG
CCAGGTCGGAAACCGAAAGCGCTCATGGCACGCCTCAATCCCGATCCACC
GGCTCTGGTGCCGATTGGAGTAACGCCCACGAAAAACGAGTTTGTAGATG
AGGAGCCCATGCTACTGGATGAACCGCAACAACTATACGGCCGCCGAGCA
CCGGAAGACCATCCGGAAGAGGACCTGCCGCACAAGGAACCCCCGCCTAT
GCCAAAGAAAGTAATGCCCGCTCCAGTTGTTCTTCCACAACCCGTGCCCA
AGCTGGAACCTTTGAATGGACCCATAACAAATCCCAAGGCGAGTCCCACG
ACACCAAATCACTCGAACAATCCCATTACTGTTTCTGCAACTGCTGGACA
TATCACTGGCAGTCCCACACGGGAAGTGCAGATTCGTCCGCCAGCCTCAC
CACGACCCGCCTGCTTTTTCTCTCTGCTGAGGGATCTATTTGTATCCACA
CCGCAGCACAGGCTAACATACGGTGAACTGCAAATTTTGTTGTCCAGCTG
GAGGGAAATCAACTCAGATGCCTCAATACCTATCGGGGAATGGCCACGAT
TCCGGCCGGATTGGTCTAAGCTGTTGCAATCGGCAATCAACTTTTTATCG
GGCGATTTTTCTTCCGTTCCTGCCGATTATGTTCCCTATATAGAACACAA
AACTCAATTGGGAATCTATCAGTGGATAGGAGCCGGTCGGGACTCGGATG
CTAGACTCCTCAGCCTGTGTCAGTTTTGGTTGCGAACGCAAAGGGAGAAA
CAGTCTCAACTCAGCCCGGTTTTGATTTCGGGTGTTCATCTAAACTCATT
GGTCGATGCTTCACCAACACCACCTCCAAGATGTCCCACCACCTGGACTG
TGCGGTCGGCAACGCAGGCGGAGATACTTGAATTCCAGAGCCAAGAGAGA
ATACGCTTTGAGTATCCGCATCGGCCGTTTACCTATCGTCTCAATGGGTA
TGAGAGTGTTGTAGGTCCAGTCAAAGGAATCTATACACAAGGTCTGCCAC
TGAACAAAGCAAGGGGTCACGCAGTTATGGTTGATGACCGACCTCCATTT
GTAACTATCCTGACTCTAGTTCGAGATGCTACCGCACGGCTTCCCAATGG
AGAGGGAACACGCTCTGAGATCTCCGAACTGCTTAAGTGCTCCCAGTACA
TCAGTCAACAAGCTGCGGATAATGTGTTACAGACCATCGTCAGTGGAGCC
TTGGATCGAATGCACGGTGGTCCGGATCCCTGCGTGAAGTATGATGCCAG
GCGAAAGATCTGGATTTATTTGCATCGAAATCGCAGCGAGGCGGAATTCG
AGAAAATGCATCGACATAACCAGTCCTTGGTAAAACAGAAACAGCAGCAA
AGGAAGCAGCTGAACAGGCCTAAGATACCAGATGACAGATCTGGTTTAGC
TGCGGATCACCAGCAGGAGCAAGTACCCGCCTTGGTTCCAGCAGTTGCCT
CACCGGTTCCAGTTTCAGTGCAACAACCAGTAGTTGCTTCTCTGCAGATG
AAGAAACCACTCGCGGTTAAGTGTCCGCCAGTGCCGCCCTTAAAATATCA
TGTACCACCAGGTACGCCAATTGGAGGAACGATTATATCAGCCTCATCGA
ATATAAATGCAAATCAAATCCCCATGCAGCAGATACAGAAATCTCTGTTA
AAGCCTGTGGTAGTGCCCAATTCCGCTCCATCCCCCGTACAACGGCAATT
GGCAACTGGTAAATCTGGCACCTTTGCGATCTCCAAGATCAGTCCCACGA
GAAATACCACGCCCATATTGGTTTCCACTCCCAGTGGCTTGCAAACAGTG
CATGTTGCAACCACTCCAAATCAAGCAGGAGGATCCGCTTCCCCCACGGT
TGCCAAAAAGCTGACCATCAAGAAGCCCGTTCCTAATAACAAAATAGGAA
ACTTTATAATACCCCTGGATCAACAGCAAAGCGGGCCGCAGCAACAGCAG
CCGACGCAACAGGGACAGCATGTGAAGGTGCAACCGATTGCTGGAAAACC
CAAGGCACTCACTATCACCCCGCGTCCCCAAATGCCGAAGAACATTATTC
GTCTGTTGCCCGCTGGAGGAGCCACCGTAACCGGGAACTCAGTGATAGGT
GGCACCAAGCCAAACTCTGTTCAGATCCTTGGTCCCCGCGTAGTTCCGCA
AATCCAGACAGTGCGTCCGGCTCAGCAGAAGATCGGAGCTGTTTCCATTG
TGGCCAACAAACCAGTTACAAGTGTGGCCGCTACAGAAACTGCAAGTCCT
GTGACAATGAGCACTATCAGTTCTCCTGTCCCTGGGGGCGGAACGATAGT
AAAAATGTCGCCTCAAGCATTTGCCAATCTTCAGCAGCAGCAGCAACAGC
TGAAACAGAAGGTTAACAATGCCAGTCCTGCCCTGAACTCACCGCAGCAA
AGGATCATTGTGGGCAATACGGCAATTTCCTCGAACAAGAAAATCGTATT
CCAGTCGCTGGGAAAAGCAGCACCCAAAATACTCACCACATCGCCAAGTG
GCTCGGTAACCAAAGCAACGACAAATTTGTCACCACAGCAGCAGAGAATT
GTGCTGCAGAACTTTAAGCAACCGGTAATAGCTACCAATCAATCCGGGAC
CCTAACGGCAGTGGGAGGAAATGCAACGCGCGTTATTCGAGCTACTCCAG
CCACATCTGTAGGAACTGGAGGAATAGTGGGAGCGGGAAACCCCCAAACA
GCTGGGCAAATCATTACCCTGGATAGTTTGCTACAAAAGCAACCTGCTGG
AGGGAAACTGCTCACAACCGCTGGCAACAACATCTTCCAGTTGGCCACTT
CCTCGGCGGGAAATGTGATTACACTTAGTCCCAACCAGACGACCAAGCAG
TTACCCACGATGACACGAATTGTGAGTGCCACCAGTACTACTCCGGCAAC
TGGAAACGCGTCGACTGTGGTGCCCAAAATTATTGGAAAAACTACTGTGC
TTCCGGGAAAACCACTACTACTCCACGCCAAAACATTAAAACAGATTGGC
GGTAGTAGTGTGCCCACAACCCAGACTACCACAACGACGACAACAGCAGT
TGCATCAGCGGCAGTGGGAAGCGGCAGTGGAGCAGGTGGAACTGTAGTTG
CGGGAACGGGAGCGACTAATGCTGCCGGGCGAACAACTCAGAATATTGTG
ATTGGAGGTCAGACAGTGAAGCTTCAGGGAGCGATTTCCGCTCGAGGTGC
CGGCGCACCCGTTCAGACTGTCATTATGGGCAACCAACTGTTGCGATTAG
CCAGTAGCACCAGTAATAGTGGAACTACTTCCACCAGCGGCATAACGACG
GCACCCAAAACGCTGCTAATAGGACCGCGCTTGGCCAAGAACGTACTGGT
GGCCAACAAGCAAATCACTAGTACAGCAAACAGCAGCGTTGTAAACAGCT
CCACGACAGCATCTCCAGCTGCGACAGCGACGGCAACGCCTAGCAACAAT
CTCGTTTTCGCCGTGCAAGGCAACGGCGGACAGCTCTTCTTCTCACCGGG
ACTGCAGGGCATGAACCTAAAGCCACTGTCCAGCTTAAAAGTGATACCCA
TGGCTGCAGCATCGGCAAGTGGGGCAGCGGTAGGAGGAAAAATCTCTGTG
ACCACGGCAGCCGGCGAAACAGGAGCAAAAACGCTGACTACAAAACTAAT
ACCGGCTACGGTTCTCAAGACGGCCACAGGGAGTGGCAACGCAAGCTTTC
TAGACCAT
BO08639.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:42:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11970-RB | 4977 | CG11970-PB | 1..4974 | 17..4990 | 24870 | 100 | Plus |
CG11970-RA | 4977 | CG11970-PA | 1..4974 | 17..4990 | 24870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:42:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11970-RB | 5607 | CG11970-RB | 380..5353 | 17..4990 | 24870 | 100 | Plus |
CG11970-RA | 5397 | CG11970-RA | 170..5143 | 17..4990 | 24870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:42:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8986490..8988982 | 1222..3714 | 12465 | 100 | Plus |
3R | 32079331 | 3R | 8985097..8986309 | 17..1229 | 6050 | 99.9 | Plus |
3R | 32079331 | 3R | 8989054..8989824 | 3713..4483 | 3855 | 100 | Plus |
3R | 32079331 | 3R | 8989888..8990395 | 4483..4990 | 2540 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 13:42:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6702..6827 | 3159..3284 | 143 | 59.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2341..2392 | 3219..3270 | 134 | 73.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2790..2880 | 4326..4422 | 129 | 62.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6792 | 3211..3270 | 129 | 68.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6750..6837 | 3185..3270 | 128 | 65.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1102..1161 | 3211..3270 | 120 | 66.7 | Plus |
BO08639.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:55:31 Download gff for
BO08639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-RA | 1..4977 | 17..4991 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:00:43 Download gff for
BO08639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-RA | 164..5139 | 13..4990 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:22:50 Download gff for
BO08639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-RA | 170..5143 | 17..4992 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:33:18 Download gff for
BO08639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-RA | 166..5139 | 17..4992 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:09 Download gff for
BO08639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11970-RA | 170..5143 | 17..4992 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:09 Download gff for
BO08639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8985097..8986302 | 17..1222 | 100 | -> | Plus |
3R | 8986491..8988981 | 1223..3713 | 100 | -> | Plus |
3R | 8989055..8989824 | 3714..4483 | 100 | -> | Plus |
3R | 8989889..8990395 | 4484..4992 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:50 Download gff for
BO08639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4810819..4812024 | 17..1222 | 100 | -> | Plus |
arm_3R | 4812213..4814703 | 1223..3713 | 100 | -> | Plus |
arm_3R | 4814777..4815546 | 3714..4483 | 100 | -> | Plus |
arm_3R | 4815611..4816117 | 4484..4992 | 99 | | Plus |
BO08639.pep Sequence
Translation from 16 to 5008
> BO08639.pep
MSNINVNTVPRSSPNANGNPNANPNRSVASEEEEGDGRMSDSGSNSASSQ
LSRTSSSSSSDSASGSLEDDPDGEDEDMSAQDAGSASETEDDTSTCQSDE
LELAQLTGRDIFRLPRGLCENAAIFHEFFSLETWQQLPHHLQARLQPMLP
DFSRLVSGQAQACAEQQRTLVQLFNGGLQRFGQSPLLQLQRQLEEGNLRP
DVLQLRRSIQHSGRREFRFQQAERLSLLAKELFMSREQLLQHAYTSAPPS
DGAFGKNLPRPRSRKRKPPTLSIENKFCSQRAKKRYAQELLELIGSLEAK
PGDISAEEEEEDEECRQLMDRLAKGPQEFELEETKAPEPAGPGRPSNAAD
KKCIYNTFFKRRPGVDDDLVLRSMQAEKIPKLNDKNFRKYLRDYKRRKLE
QPESPEFDTSEVRLRDICTRAQFVGSFKPGRKPKALMARLNPDPPALVPI
GVTPTKNEFVDEEPMLLDEPQQLYGRRAPEDHPEEDLPHKEPPPMPKKVM
PAPVVLPQPVPKLEPLNGPITNPKASPTTPNHSNNPITVSATAGHITGSP
TREVQIRPPASPRPACFFSLLRDLFVSTPQHRLTYGELQILLSSWREINS
DASIPIGEWPRFRPDWSKLLQSAINFLSGDFSSVPADYVPYIEHKTQLGI
YQWIGAGRDSDARLLSLCQFWLRTQREKQSQLSPVLISGVHLNSLVDASP
TPPPRCPTTWTVRSATQAEILEFQSQERIRFEYPHRPFTYRLNGYESVVG
PVKGIYTQGLPLNKARGHAVMVDDRPPFVTILTLVRDATARLPNGEGTRS
EISELLKCSQYISQQAADNVLQTIVSGALDRMHGGPDPCVKYDARRKIWI
YLHRNRSEAEFEKMHRHNQSLVKQKQQQRKQLNRPKIPDDRSGLAADHQQ
EQVPALVPAVASPVPVSVQQPVVASLQMKKPLAVKCPPVPPLKYHVPPGT
PIGGTIISASSNINANQIPMQQIQKSLLKPVVVPNSAPSPVQRQLATGKS
GTFAISKISPTRNTTPILVSTPSGLQTVHVATTPNQAGGSASPTVAKKLT
IKKPVPNNKIGNFIIPLDQQQSGPQQQQPTQQGQHVKVQPIAGKPKALTI
TPRPQMPKNIIRLLPAGGATVTGNSVIGGTKPNSVQILGPRVVPQIQTVR
PAQQKIGAVSIVANKPVTSVAATETASPVTMSTISSPVPGGGTIVKMSPQ
AFANLQQQQQQLKQKVNNASPALNSPQQRIIVGNTAISSNKKIVFQSLGK
AAPKILTTSPSGSVTKATTNLSPQQQRIVLQNFKQPVIATNQSGTLTAVG
GNATRVIRATPATSVGTGGIVGAGNPQTAGQIITLDSLLQKQPAGGKLLT
TAGNNIFQLATSSAGNVITLSPNQTTKQLPTMTRIVSATSTTPATGNAST
VVPKIIGKTTVLPGKPLLLHAKTLKQIGGSSVPTTQTTTTTTTAVASAAV
GSGSGAGGTVVAGTGATNAAGRTTQNIVIGGQTVKLQGAISARGAGAPVQ
TVIMGNQLLRLASSTSNSGTTSTSGITTAPKTLLIGPRLAKNVLVANKQI
TSTANSSVVNSSTTASPAATATATPSNNLVFAVQGNGGQLFFSPGLQGMN
LKPLSSLKVIPMAAASASGAAVGGKISVTTAAGETGAKTLTTKLIPATVL
KTATGSGNASFLDH
BO08639.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:44:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11970-PB | 1658 | CG11970-PB | 1..1658 | 1..1658 | 8462 | 100 | Plus |
CG11970-PA | 1658 | CG11970-PA | 1..1658 | 1..1658 | 8462 | 100 | Plus |
dom-PD | 3183 | CG9696-PD | 2377..2903 | 1145..1651 | 212 | 24.4 | Plus |
dom-PA | 3198 | CG9696-PA | 2377..2903 | 1145..1651 | 212 | 24.4 | Plus |
dom-PG | 3233 | CG9696-PG | 2412..2938 | 1145..1651 | 212 | 24.4 | Plus |