Clone BO08639 Report

Search the DGRC for BO08639

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:86
Well:39
Vector:pDNR-Dual
Associated Gene/TranscriptCG11970-RA
Protein status:BO08639.pep: validated full length
Sequenced Size:5008

Clone Sequence Records

BO08639.3prime Sequence

947 bp (762 high quality bases) assembled on 2006-01-09

> BO08639.3prime
ATGGTCTAGAAAGCTTGCGTTGCCACTCCCTGTGGCCGTCTTGAGAACCG
TAGCCGGTATTAGTTTTGTAGTCAGCGTTTTTGCTCCTGTTTCGCCGGCT
GCCGTGGTCACAGAGATTTTTCCTCCTACCGCTGCCCCACTTGCCGATGC
TGCAGCCATGGGTATCACTTTTAAGCTGGACAGTGGCTTTAGGTTCATGC
CCTGCAGTCCCGGTGAGAAGAAGAGCTGTCCGCCGTTGCCTTGCACGGCG
AAAACGAGATTGTTGCTAGGCGTTGCCGTCGCTGTCGCAGCTGGAGATGC
TGTCGTGGAGCTGTTTACAACGCTGCTGTTTGCTGTACTAGTGATTTGCT
TGTTGGCCACCAGTACGTTCTTGGCCAAGCGCGGTCCTATTAGCAGCGTT
TTGGGTGCCGTCGTTATGCCGCTGGTGGAAGTAGTTCCACTATTACTGGT
GCTACTGGCTAATCGCAACAGTTGGTTGCCCATAATGACAGTCTGAACGG
GTGCGCCGGCACCTCGAGCGGAAATCGCTCCCTGAAGCTTCACTGTCTGA
CCTCCAATCACAATATTCTGAGTTGTTCGCCCGGCAGCATTAGTCGCTCC
CGTTCCCGCAACTACAGTTCCACCTGCTCCACTGCCGCTTCCCACTGCCG
CTGATGCAACTGCTGTTGTCGTCGTTGTGGTAGTCTGGGTTGTGGGCACA
CTACTACCGCCAATCTGTTTTAATGTTTTGGCGTGGAGTAGTAGTGGTTT
TCCCGGAAGCACAGTAGTTTTTCCAATAATTTTGGGCACCACAGTCGACG
CGTTTCCAGTTGCCGGAGTAGTACTGGTGGCACTCACAATTCGTGTCATC
GTGGGTAACTGCTTGGTCGTCTGGTTGGGACTAAGTGTAATCACATTTTC
CCGCCGAGGAAGTGGCCAACTGGAAGAAGTTGTTGCCAGCGGTTGTG

BO08639.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-PA 4977 CG11970-RA 4095..4974 898..19 4400 100 Minus
CG11970-PA 4977 CG11970-RA 4047..4097 947..897 230 98 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:38:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-RB 5607 CG11970-RB 4426..5353 947..19 4605 99.8 Minus
CG11970-RA 5397 CG11970-RA 4216..5143 947..19 4605 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:38:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8989888..8990395 526..19 2540 100 Minus
3R 32079331 3R 8989404..8989824 947..526 2045 99.5 Minus
Blast to na_te.dros performed 2015-02-11 11:38:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2790..2880 683..587 129 62.9 Minus

BO08639.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:52:16 Download gff for BO08639.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11970-PA 4047..4977 18..947 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:48:59 Download gff for BO08639.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11970-PA 4047..4977 18..947 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 07:54:38 Download gff for BO08639.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 4216..5143 19..947 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:57:30 Download gff for BO08639.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 4216..5143 19..947 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:57:30 Download gff for BO08639.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 8989404..8989824 526..947 99 -> Minus
3R 8989889..8990395 19..525 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 07:54:38 Download gff for BO08639.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4815126..4815546 526..947 99 -> Minus
arm_3R 4815611..4816117 19..525 100   Minus

BO08639.5prime Sequence

859 bp (808 high quality bases) assembled on 2006-01-09

> BO08639.5prime
GAAGTTATCAGTCGACATGAGCAACATAAACGTAAACACAGTGCCCAGGT
CGAGTCCAAATGCCAATGGGAATCCAAATGCGAATCCAAATCGCAGTGTG
GCCTCCGAGGAGGAGGAGGGCGATGGCCGGATGAGCGACAGCGGGAGCAA
CTCGGCCAGCAGCCAGCTGAGTCGCACGTCGAGCAGCAGCTCCTCGGACT
CGGCGAGTGGTTCACTGGAGGATGACCCGGATGGCGAGGACGAGGATATG
TCCGCCCAGGACGCGGGCAGCGCCTCGGAAACGGAAGACGACACCTCCAC
CTGCCAGTCGGATGAACTGGAGCTGGCGCAGCTCACTGGTCGGGATATCT
TTCGGTTGCCGCGCGGCTTGTGCGAAAATGCAGCTATTTTTCATGAATTC
TTCTCTCTTGAGACCTGGCAACAGCTGCCCCATCACCTCCAGGCCCGACT
ACAGCCGATGCTTCCGGACTTCTCCCGTTTGGTATCCGGACAGGCACAGG
CCTGTGCGGAACAGCAACGTACACTGGTGCAGCTATTTAATGGCGGTCTA
CAGCGTTTCGGGCAATCACCACTGCTTCAGCTACAACGCCAACTTGAGGA
AGGAAACCTGCGTCCCGATGTCCTTCAGTTGCGGAGGAGCATACAGCATT
CGGGCAGAAGGGAATTTCGTTTCCAGCAGGCTGAGCGCCTAAGTCTGCTA
GCCAAGGAGCTCTTTATGTCAAGGGAACAGCTACTCCAGCATGCCTACAC
CTCTGCTCCACCTTCTGATGGTGCTTTTGGTAAAAATCTGCCAAGGCCAC
GTTCCCGTAAGAGAAAAGCGCCCACACTGTCGATAGAGAACAAATTTTGT
TCGCAGCGT

BO08639.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-PA 4977 CG11970-RA 1..843 17..859 4165 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:02:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-RB 5607 CG11970-RB 380..1222 17..859 4185 99.8 Plus
CG11970-RA 5397 CG11970-RA 170..1012 17..859 4185 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8985097..8985939 17..859 4185 99.8 Plus
Blast to na_te.dros performed on 2015-02-13 08:02:08 has no hits.

BO08639.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:52:17 Download gff for BO08639.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11970-PA 1..843 17..859 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:49:01 Download gff for BO08639.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11970-PA 1..843 17..859 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:53:04 Download gff for BO08639.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 168..1012 13..859 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:05:44 Download gff for BO08639.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 168..1012 13..859 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:05:44 Download gff for BO08639.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8985095..8985939 13..859 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:53:04 Download gff for BO08639.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4810817..4811661 13..859 99   Plus

BO08639.complete Sequence

5008 bp assembled on 2007-11-02

GenBank Submission: FJ631262

> BO08639.complete
GAAGTTATCAGTCGACATGAGCAACATAAACGTAAACACAGTGCCCAGGT
CGAGTCCAAATGCCAATGGGAATCCAAATGCGAATCCAAATCGCAGTGTG
GCCTCCGAGGAGGAGGAGGGCGATGGCCGGATGAGCGACAGCGGGAGCAA
CTCGGCCAGCAGCCAGCTGAGTCGCACGTCGAGCAGCAGCTCCTCGGACT
CGGCGAGTGGTTCACTGGAGGATGACCCGGATGGCGAGGACGAGGATATG
TCCGCCCAGGACGCGGGCAGCGCCTCGGAAACGGAAGACGACACCTCCAC
CTGCCAGTCGGATGAACTGGAGCTGGCGCAGCTCACTGGTCGGGATATCT
TTCGGTTGCCGCGCGGCTTGTGCGAAAATGCAGCTATTTTTCATGAATTC
TTCTCTCTTGAGACCTGGCAACAGCTGCCCCATCACCTCCAGGCCCGACT
ACAGCCGATGCTTCCGGACTTCTCCCGTTTGGTATCCGGACAGGCACAGG
CCTGTGCGGAACAGCAACGTACACTGGTGCAGCTATTTAATGGCGGTCTA
CAGCGTTTCGGGCAATCACCACTGCTTCAGCTACAACGCCAACTTGAGGA
AGGAAACCTGCGTCCCGATGTCCTTCAGTTGCGGAGGAGCATACAGCATT
CGGGCAGAAGGGAATTTCGTTTCCAGCAGGCTGAGCGCCTAAGTCTGCTA
GCCAAGGAGCTCTTTATGTCAAGGGAACAGCTACTCCAGCATGCCTACAC
CTCTGCTCCACCTTCTGATGGTGCTTTTGGTAAAAATCTGCCAAGGCCAC
GTTCCCGTAAGAGAAAGCCGCCCACACTGTCGATAGAGAACAAATTTTGT
TCGCAGCGTGCCAAGAAACGCTATGCCCAAGAGCTTCTGGAACTAATAGG
CTCGCTAGAGGCGAAACCCGGCGACATCAGTGCGGAGGAGGAGGAAGAGG
ACGAGGAATGCCGACAGCTTATGGACCGTTTGGCCAAAGGCCCACAGGAA
TTCGAATTGGAGGAGACCAAGGCTCCGGAGCCGGCAGGTCCTGGCAGGCC
CTCGAATGCGGCAGATAAGAAATGCATTTACAACACCTTCTTCAAGCGGC
GACCTGGTGTAGACGATGACCTTGTGCTGCGTTCCATGCAGGCGGAAAAA
ATTCCCAAGCTTAACGACAAGAATTTCCGGAAGTATCTAAGAGACTACAA
GCGCCGGAAATTAGAACAACCGGAAAGTCCCGAGTTCGATACATCGGAGG
TACGGCTGCGCGACATATGCACTCGAGCACAGTTTGTCGGAAGCTTTAAG
CCAGGTCGGAAACCGAAAGCGCTCATGGCACGCCTCAATCCCGATCCACC
GGCTCTGGTGCCGATTGGAGTAACGCCCACGAAAAACGAGTTTGTAGATG
AGGAGCCCATGCTACTGGATGAACCGCAACAACTATACGGCCGCCGAGCA
CCGGAAGACCATCCGGAAGAGGACCTGCCGCACAAGGAACCCCCGCCTAT
GCCAAAGAAAGTAATGCCCGCTCCAGTTGTTCTTCCACAACCCGTGCCCA
AGCTGGAACCTTTGAATGGACCCATAACAAATCCCAAGGCGAGTCCCACG
ACACCAAATCACTCGAACAATCCCATTACTGTTTCTGCAACTGCTGGACA
TATCACTGGCAGTCCCACACGGGAAGTGCAGATTCGTCCGCCAGCCTCAC
CACGACCCGCCTGCTTTTTCTCTCTGCTGAGGGATCTATTTGTATCCACA
CCGCAGCACAGGCTAACATACGGTGAACTGCAAATTTTGTTGTCCAGCTG
GAGGGAAATCAACTCAGATGCCTCAATACCTATCGGGGAATGGCCACGAT
TCCGGCCGGATTGGTCTAAGCTGTTGCAATCGGCAATCAACTTTTTATCG
GGCGATTTTTCTTCCGTTCCTGCCGATTATGTTCCCTATATAGAACACAA
AACTCAATTGGGAATCTATCAGTGGATAGGAGCCGGTCGGGACTCGGATG
CTAGACTCCTCAGCCTGTGTCAGTTTTGGTTGCGAACGCAAAGGGAGAAA
CAGTCTCAACTCAGCCCGGTTTTGATTTCGGGTGTTCATCTAAACTCATT
GGTCGATGCTTCACCAACACCACCTCCAAGATGTCCCACCACCTGGACTG
TGCGGTCGGCAACGCAGGCGGAGATACTTGAATTCCAGAGCCAAGAGAGA
ATACGCTTTGAGTATCCGCATCGGCCGTTTACCTATCGTCTCAATGGGTA
TGAGAGTGTTGTAGGTCCAGTCAAAGGAATCTATACACAAGGTCTGCCAC
TGAACAAAGCAAGGGGTCACGCAGTTATGGTTGATGACCGACCTCCATTT
GTAACTATCCTGACTCTAGTTCGAGATGCTACCGCACGGCTTCCCAATGG
AGAGGGAACACGCTCTGAGATCTCCGAACTGCTTAAGTGCTCCCAGTACA
TCAGTCAACAAGCTGCGGATAATGTGTTACAGACCATCGTCAGTGGAGCC
TTGGATCGAATGCACGGTGGTCCGGATCCCTGCGTGAAGTATGATGCCAG
GCGAAAGATCTGGATTTATTTGCATCGAAATCGCAGCGAGGCGGAATTCG
AGAAAATGCATCGACATAACCAGTCCTTGGTAAAACAGAAACAGCAGCAA
AGGAAGCAGCTGAACAGGCCTAAGATACCAGATGACAGATCTGGTTTAGC
TGCGGATCACCAGCAGGAGCAAGTACCCGCCTTGGTTCCAGCAGTTGCCT
CACCGGTTCCAGTTTCAGTGCAACAACCAGTAGTTGCTTCTCTGCAGATG
AAGAAACCACTCGCGGTTAAGTGTCCGCCAGTGCCGCCCTTAAAATATCA
TGTACCACCAGGTACGCCAATTGGAGGAACGATTATATCAGCCTCATCGA
ATATAAATGCAAATCAAATCCCCATGCAGCAGATACAGAAATCTCTGTTA
AAGCCTGTGGTAGTGCCCAATTCCGCTCCATCCCCCGTACAACGGCAATT
GGCAACTGGTAAATCTGGCACCTTTGCGATCTCCAAGATCAGTCCCACGA
GAAATACCACGCCCATATTGGTTTCCACTCCCAGTGGCTTGCAAACAGTG
CATGTTGCAACCACTCCAAATCAAGCAGGAGGATCCGCTTCCCCCACGGT
TGCCAAAAAGCTGACCATCAAGAAGCCCGTTCCTAATAACAAAATAGGAA
ACTTTATAATACCCCTGGATCAACAGCAAAGCGGGCCGCAGCAACAGCAG
CCGACGCAACAGGGACAGCATGTGAAGGTGCAACCGATTGCTGGAAAACC
CAAGGCACTCACTATCACCCCGCGTCCCCAAATGCCGAAGAACATTATTC
GTCTGTTGCCCGCTGGAGGAGCCACCGTAACCGGGAACTCAGTGATAGGT
GGCACCAAGCCAAACTCTGTTCAGATCCTTGGTCCCCGCGTAGTTCCGCA
AATCCAGACAGTGCGTCCGGCTCAGCAGAAGATCGGAGCTGTTTCCATTG
TGGCCAACAAACCAGTTACAAGTGTGGCCGCTACAGAAACTGCAAGTCCT
GTGACAATGAGCACTATCAGTTCTCCTGTCCCTGGGGGCGGAACGATAGT
AAAAATGTCGCCTCAAGCATTTGCCAATCTTCAGCAGCAGCAGCAACAGC
TGAAACAGAAGGTTAACAATGCCAGTCCTGCCCTGAACTCACCGCAGCAA
AGGATCATTGTGGGCAATACGGCAATTTCCTCGAACAAGAAAATCGTATT
CCAGTCGCTGGGAAAAGCAGCACCCAAAATACTCACCACATCGCCAAGTG
GCTCGGTAACCAAAGCAACGACAAATTTGTCACCACAGCAGCAGAGAATT
GTGCTGCAGAACTTTAAGCAACCGGTAATAGCTACCAATCAATCCGGGAC
CCTAACGGCAGTGGGAGGAAATGCAACGCGCGTTATTCGAGCTACTCCAG
CCACATCTGTAGGAACTGGAGGAATAGTGGGAGCGGGAAACCCCCAAACA
GCTGGGCAAATCATTACCCTGGATAGTTTGCTACAAAAGCAACCTGCTGG
AGGGAAACTGCTCACAACCGCTGGCAACAACATCTTCCAGTTGGCCACTT
CCTCGGCGGGAAATGTGATTACACTTAGTCCCAACCAGACGACCAAGCAG
TTACCCACGATGACACGAATTGTGAGTGCCACCAGTACTACTCCGGCAAC
TGGAAACGCGTCGACTGTGGTGCCCAAAATTATTGGAAAAACTACTGTGC
TTCCGGGAAAACCACTACTACTCCACGCCAAAACATTAAAACAGATTGGC
GGTAGTAGTGTGCCCACAACCCAGACTACCACAACGACGACAACAGCAGT
TGCATCAGCGGCAGTGGGAAGCGGCAGTGGAGCAGGTGGAACTGTAGTTG
CGGGAACGGGAGCGACTAATGCTGCCGGGCGAACAACTCAGAATATTGTG
ATTGGAGGTCAGACAGTGAAGCTTCAGGGAGCGATTTCCGCTCGAGGTGC
CGGCGCACCCGTTCAGACTGTCATTATGGGCAACCAACTGTTGCGATTAG
CCAGTAGCACCAGTAATAGTGGAACTACTTCCACCAGCGGCATAACGACG
GCACCCAAAACGCTGCTAATAGGACCGCGCTTGGCCAAGAACGTACTGGT
GGCCAACAAGCAAATCACTAGTACAGCAAACAGCAGCGTTGTAAACAGCT
CCACGACAGCATCTCCAGCTGCGACAGCGACGGCAACGCCTAGCAACAAT
CTCGTTTTCGCCGTGCAAGGCAACGGCGGACAGCTCTTCTTCTCACCGGG
ACTGCAGGGCATGAACCTAAAGCCACTGTCCAGCTTAAAAGTGATACCCA
TGGCTGCAGCATCGGCAAGTGGGGCAGCGGTAGGAGGAAAAATCTCTGTG
ACCACGGCAGCCGGCGAAACAGGAGCAAAAACGCTGACTACAAAACTAAT
ACCGGCTACGGTTCTCAAGACGGCCACAGGGAGTGGCAACGCAAGCTTTC
TAGACCAT

BO08639.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:42:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-RB 4977 CG11970-PB 1..4974 17..4990 24870 100 Plus
CG11970-RA 4977 CG11970-PA 1..4974 17..4990 24870 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:42:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-RB 5607 CG11970-RB 380..5353 17..4990 24870 100 Plus
CG11970-RA 5397 CG11970-RA 170..5143 17..4990 24870 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:42:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8986490..8988982 1222..3714 12465 100 Plus
3R 32079331 3R 8985097..8986309 17..1229 6050 99.9 Plus
3R 32079331 3R 8989054..8989824 3713..4483 3855 100 Plus
3R 32079331 3R 8989888..8990395 4483..4990 2540 100 Plus
Blast to na_te.dros performed 2014-11-27 13:42:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6702..6827 3159..3284 143 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2341..2392 3219..3270 134 73.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2790..2880 4326..4422 129 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6733..6792 3211..3270 129 68.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6750..6837 3185..3270 128 65.2 Plus
roo 9092 roo DM_ROO 9092bp 1102..1161 3211..3270 120 66.7 Plus

BO08639.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:55:31 Download gff for BO08639.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 1..4977 17..4991 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:00:43 Download gff for BO08639.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 164..5139 13..4990 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:22:50 Download gff for BO08639.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 170..5143 17..4992 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:33:18 Download gff for BO08639.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 166..5139 17..4992 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:09 Download gff for BO08639.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 170..5143 17..4992 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:09 Download gff for BO08639.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8985097..8986302 17..1222 100 -> Plus
3R 8986491..8988981 1223..3713 100 -> Plus
3R 8989055..8989824 3714..4483 100 -> Plus
3R 8989889..8990395 4484..4992 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:50 Download gff for BO08639.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4810819..4812024 17..1222 100 -> Plus
arm_3R 4812213..4814703 1223..3713 100 -> Plus
arm_3R 4814777..4815546 3714..4483 100 -> Plus
arm_3R 4815611..4816117 4484..4992 99   Plus

BO08639.pep Sequence

Translation from 16 to 5008

> BO08639.pep
MSNINVNTVPRSSPNANGNPNANPNRSVASEEEEGDGRMSDSGSNSASSQ
LSRTSSSSSSDSASGSLEDDPDGEDEDMSAQDAGSASETEDDTSTCQSDE
LELAQLTGRDIFRLPRGLCENAAIFHEFFSLETWQQLPHHLQARLQPMLP
DFSRLVSGQAQACAEQQRTLVQLFNGGLQRFGQSPLLQLQRQLEEGNLRP
DVLQLRRSIQHSGRREFRFQQAERLSLLAKELFMSREQLLQHAYTSAPPS
DGAFGKNLPRPRSRKRKPPTLSIENKFCSQRAKKRYAQELLELIGSLEAK
PGDISAEEEEEDEECRQLMDRLAKGPQEFELEETKAPEPAGPGRPSNAAD
KKCIYNTFFKRRPGVDDDLVLRSMQAEKIPKLNDKNFRKYLRDYKRRKLE
QPESPEFDTSEVRLRDICTRAQFVGSFKPGRKPKALMARLNPDPPALVPI
GVTPTKNEFVDEEPMLLDEPQQLYGRRAPEDHPEEDLPHKEPPPMPKKVM
PAPVVLPQPVPKLEPLNGPITNPKASPTTPNHSNNPITVSATAGHITGSP
TREVQIRPPASPRPACFFSLLRDLFVSTPQHRLTYGELQILLSSWREINS
DASIPIGEWPRFRPDWSKLLQSAINFLSGDFSSVPADYVPYIEHKTQLGI
YQWIGAGRDSDARLLSLCQFWLRTQREKQSQLSPVLISGVHLNSLVDASP
TPPPRCPTTWTVRSATQAEILEFQSQERIRFEYPHRPFTYRLNGYESVVG
PVKGIYTQGLPLNKARGHAVMVDDRPPFVTILTLVRDATARLPNGEGTRS
EISELLKCSQYISQQAADNVLQTIVSGALDRMHGGPDPCVKYDARRKIWI
YLHRNRSEAEFEKMHRHNQSLVKQKQQQRKQLNRPKIPDDRSGLAADHQQ
EQVPALVPAVASPVPVSVQQPVVASLQMKKPLAVKCPPVPPLKYHVPPGT
PIGGTIISASSNINANQIPMQQIQKSLLKPVVVPNSAPSPVQRQLATGKS
GTFAISKISPTRNTTPILVSTPSGLQTVHVATTPNQAGGSASPTVAKKLT
IKKPVPNNKIGNFIIPLDQQQSGPQQQQPTQQGQHVKVQPIAGKPKALTI
TPRPQMPKNIIRLLPAGGATVTGNSVIGGTKPNSVQILGPRVVPQIQTVR
PAQQKIGAVSIVANKPVTSVAATETASPVTMSTISSPVPGGGTIVKMSPQ
AFANLQQQQQQLKQKVNNASPALNSPQQRIIVGNTAISSNKKIVFQSLGK
AAPKILTTSPSGSVTKATTNLSPQQQRIVLQNFKQPVIATNQSGTLTAVG
GNATRVIRATPATSVGTGGIVGAGNPQTAGQIITLDSLLQKQPAGGKLLT
TAGNNIFQLATSSAGNVITLSPNQTTKQLPTMTRIVSATSTTPATGNAST
VVPKIIGKTTVLPGKPLLLHAKTLKQIGGSSVPTTQTTTTTTTAVASAAV
GSGSGAGGTVVAGTGATNAAGRTTQNIVIGGQTVKLQGAISARGAGAPVQ
TVIMGNQLLRLASSTSNSGTTSTSGITTAPKTLLIGPRLAKNVLVANKQI
TSTANSSVVNSSTTASPAATATATPSNNLVFAVQGNGGQLFFSPGLQGMN
LKPLSSLKVIPMAAASASGAAVGGKISVTTAAGETGAKTLTTKLIPATVL
KTATGSGNASFLDH

BO08639.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:44:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-PB 1658 CG11970-PB 1..1658 1..1658 8462 100 Plus
CG11970-PA 1658 CG11970-PA 1..1658 1..1658 8462 100 Plus
dom-PD 3183 CG9696-PD 2377..2903 1145..1651 212 24.4 Plus
dom-PA 3198 CG9696-PA 2377..2903 1145..1651 212 24.4 Plus
dom-PG 3233 CG9696-PG 2412..2938 1145..1651 212 24.4 Plus