Clone Sequence Records
BO08865.3prime Sequence
900 bp (759 high quality bases) assembled on 2006-01-10
> BO08865.3prime
ATGGTCTAGAAAGCTTGCCGAAAGGAACGTGCGCACGAATCCCTTGATGT
CTGCGCGGCACATGGGACAATTGGCTACACTGGGGGCGCACTGATTGCAG
GTGGCCAAGTGGCCACAGGGCAGGAACACTACGCCAACCTCCTCGTCCAA
GCATACCTTGCATAAGCGTGCATCCTTTAGCTGGCGGTTTTCCTCCTCCA
GCGATAGGTTTCCGTTCGGCGTGGCCACCGACATCTTTTGTATTTCGTCT
GTGATTTTCGATATATTCGCCACTGCTTCAGCTGCCTGTGGTTTGGCTGG
GATGGAATCGGCCACCGGTATTGGCACAGATGCTGCCTTGCTGGTGGTGG
CCTGACATGGTTCAATAAAAGGAGCACTTGGCTCCGGCGGCTCGCGCACC
TCCAGTGCAGCTCCTGCGCCCGCATCGTCAAAGATGTCATGCAATAGTTC
GTCCAACGTAGAGAAAGCGCAGCCGGAACTCAAGAGCTTGCGCTGGATGG
CATTGCGCACAACTCCTCCATCGATACCCAAGGCTAGGGCCTCCTTGGCC
GGAGCTTCATCCATCAGTACGTCTGCTTGGAGCGTTGGAGCCGGAGCAGT
TGCTGGCTGGGAACTGGCGTTGGCAGCTGTTGTCGCGAGCACTTCGCTTA
CATAGGCTGGACCCTTGGCCAGCAAAACGAACTGACACTTTGGCGACCAC
TTGGCGTGTTCGAACCACGGCTCGTCCTCCTTCTGCCAGGAGCGCAATCC
AATGTTGCAGTGGAAACAGCGCACCTGGTCGCCTATTTTCTGATAATATA
GGCCAGCCTGCGCCAAAGCCGAAGCGGGCTGAATATTGGAAATGGGCCAA
TCGGTGAAGGTTCTCAATCTGGCGTCCACGCANGCGTACTTGGGACGCAG
BO08865.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:30:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8293-PA | 1497 | Iap2-RA | 613..1494 | 900..19 | 4391 | 99.8 | Minus |
| CG8293-PB | 1497 | Iap2-RB | 613..1494 | 900..19 | 4391 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:15:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap2-RB | 1997 | CG8293-RB | 651..1532 | 900..19 | 4399 | 99.9 | Minus |
| Diap2-RA | 2106 | CG8293-RA | 760..1641 | 900..19 | 4399 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:15:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15932784..15933579 | 105..900 | 3969 | 99.9 | Plus |
| 2R | 25286936 | 2R | 15932635..15932721 | 19..105 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:15:15 has no hits.
BO08865.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:55:34 Download gff for
BO08865.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-PB | 613..1497 | 16..900 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:53:31 Download gff for
BO08865.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8293-PB | 613..1497 | 16..900 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:42:03 Download gff for
BO08865.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RA | 760..1646 | 14..900 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:59:52 Download gff for
BO08865.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diap2-RA | 760..1646 | 14..900 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:59:52 Download gff for
BO08865.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15932630..15932720 | 14..104 | 97 | <- | Plus |
| 2R | 15932784..15933579 | 105..900 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:42:03 Download gff for
BO08865.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11820135..11820225 | 14..104 | 97 | <- | Plus |
| arm_2R | 11820289..11821084 | 105..900 | 99 | | Plus |
BO08865.5prime Sequence
915 bp (736 high quality bases) assembled on 2006-01-09
> BO08865.5prime
GAAGTTATCAGTCGACATGACGGAGCTGGGCATGGAGCTGGAGAGCGTTC
GCCTGGCGACATTTGGGGAATGGCCCCTGAATGCCCCAGTTTCCGCGGAG
GATCTGGTCGCCAATGGTTTCTTTGCCACGGGAAACTGGCTGGAGGCCGA
GTGCCATTTCTGCCACGTGCGCATCGACCGCTGGGAATACGGCGATCAAG
TGGCGGAGCGCCATCGCCGCTCCTCGCCCATCTGCTCCATGGTTCTGGCT
CCCAATCACTGCGGCAATGTTCCCAGGAGCCAGGAGAGCGACAACGAGGG
AAACAGCGTAGTGGACAGCCCGGAGTCCTGCTCTTGTCCCGATCTCTTGT
TGGAGGCCAATCGCTTGGTAACTTTCAAGGACTGGCCGAATCCCAACATC
ACGCCGCAGGCTCTGGCAAAGGCAGGTTTCTACTACCTGAACCGTCTGGA
TCACGTGAAGTGTGTTTGGTGCAACGGAGTGATTGCCAAGTGGGAGAAGA
ACGACAATGCCTTTGAAGAGCACAAGCGCTTTTTTCCCCAATGTCCTCGT
GTGCAAATGGGCCCCCTTATAGAGTTTGCCACCGGGAAGAACCTGGATGA
GCTGGGCATCCAGCCCACCACTCTGCCACTGCGTCCCAAGTACGCCTGCG
TGGACGCCAGATTGAGAACCTTCACCGATTGGCCCATTTCCAATATTCAG
CCCGCTTCGGCTTTGGCGCAGGCTGGCCTATATTATCAGAAAATAGGCGA
CCAGGTGCGCTGTTTCCACTGCAACATTGGATTGCGCTCCTGGCAGAAGG
AGGACGAGCCGTGGTTCGAACACGCCCAGTGGTCGCCAAAGTGTCAGTTC
GTTTTGCTGGCCCAGGGTCCAGCCTATGTAAGCGAAGTGCTCGCGACAAC
AGCTGCCAACGCCAG
BO08865.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:30:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8293-PA | 1497 | Iap2-RA | 1..899 | 17..915 | 4445 | 99.7 | Plus |
| CG8293-PB | 1497 | Iap2-RB | 1..899 | 17..915 | 4445 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:55:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap2-RB | 1997 | CG8293-RB | 39..937 | 17..915 | 4465 | 99.8 | Plus |
| Diap2-RA | 2106 | CG8293-RA | 148..1046 | 17..915 | 4465 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15933293..15933820 | 915..388 | 2610 | 99.6 | Minus |
| 2R | 25286936 | 2R | 15934199..15934570 | 388..17 | 1860 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:55:29 has no hits.
BO08865.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:55:36 Download gff for
BO08865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-PB | 1..899 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:53:32 Download gff for
BO08865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8293-PB | 1..899 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:51:29 Download gff for
BO08865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RA | 148..1046 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:02:38 Download gff for
BO08865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diap2-RA | 148..1046 | 17..915 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:02:38 Download gff for
BO08865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15933293..15933819 | 389..915 | 99 | <- | Minus |
| 2R | 15934199..15934570 | 17..388 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:51:29 Download gff for
BO08865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11820798..11821324 | 389..915 | 99 | <- | Minus |
| arm_2R | 11821704..11822075 | 17..388 | 100 | | Minus |
BO08865.complete Sequence
1528 bp (1528 high quality bases) assembled on 2006-01-18
GenBank Submission: FJ631295
> BO08865.complete
GAAGTTATCAGTCGACATGACGGAGCTGGGCATGGAGCTGGAGAGCGTTC
GCCTGGCGACATTTGGGGAATGGCCCCTGAATGCCCCAGTTTCCGCGGAG
GATCTGGTCGCCAATGGTTTCTTTGCCACGGGAAACTGGCTGGAGGCCGA
GTGCCATTTCTGCCACGTGCGCATCGACCGCTGGGAATACGGCGATCAAG
TGGCGGAGCGCCATCGCCGCTCCTCGCCCATCTGCTCCATGGTTCTGGCT
CCCAATCACTGCGGCAATGTTCCCAGGAGCCAGGAGAGCGACAACGAGGG
AAACAGCGTAGTGGACAGCCCGGAGTCCTGCTCTTGTCCCGATCTCTTGT
TGGAGGCCAATCGCTTGGTAACTTTCAAGGACTGGCCGAATCCCAACATC
ACGCCGCAGGCTCTGGCAAAGGCAGGTTTCTACTACCTGAACCGTCTGGA
TCACGTGAAGTGTGTTTGGTGCAACGGAGTGATTGCCAAGTGGGAGAAGA
ACGACAATGCCTTTGAAGAGCACAAGCGCTTTTTTCCCCAATGTCCTCGT
GTGCAAATGGGCCCCCTTATAGAGTTTGCCACCGGGAAGAACCTGGATGA
GCTGGGCATCCAGCCCACCACTCTGCCACTGCGTCCCAAGTACGCCTGCG
TGGACGCCAGATTGAGAACCTTCACCGATTGGCCCATTTCCAATATTCAG
CCCGCTTCGGCTTTGGCGCAGGCTGGCCTATATTATCAGAAAATAGGCGA
CCAGGTGCGCTGTTTCCACTGCAACATTGGATTGCGCTCCTGGCAGAAGG
AGGACGAGCCGTGGTTCGAACACGCCAAGTGGTCGCCAAAGTGTCAGTTC
GTTTTGCTGGCCAAGGGTCCAGCCTATGTAAGCGAAGTGCTCGCGACAAC
AGCTGCCAACGCCAGTTCCCAGCCAGCAACTGCTCCGGCTCCAACGCTCC
AAGCAGACGTACTGATGGATGAAGCTCCGGCCAAGGAGGCCCTAGCCTTG
GGTATCGATGGAGGAGTTGTGCGCAATGCCATCCAGCGCAAGCTCTTGAG
TTCCGGCTGCGCTTTCTCTACGTTGGACGAACTATTGCATGACATCTTTG
ACGATGCGGGCGCAGGAGCTGCACTGGAGGTGCGCGAGCCGCCGGAGCCA
AGTGCTCCTTTTATTGAACCATGTCAGGCCACCACCAGCAAGGCAGCATC
TGTGCCAATACCGGTGGCCGATTCCATCCCAGCCAAACCACAGGCAGCTG
AAGCAGTGGCGAATATATCGAAAATCACAGACGAAATACAAAAGATGTCG
GTGGCCACGCCGAACGGAAACCTATCGCTGGAGGAGGAAAACCGCCAGCT
AAAGGATGCACGCTTATGCAAGGTATGCTTGGACGAGGAGGTTGGCGTAG
TGTTCCTGCCCTGTGGCCACTTGGCCACCTGCAATCAGTGCGCCCCCAGT
GTAGCCAATTGTCCCATGTGCCGCGCAGACATCAAGGGATTCGTGCGCAC
GTTCCTTTCGGCAAGCTTTCTAGACCAT
BO08865.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:57:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap2-RB | 1497 | CG8293-PB | 1..1494 | 17..1510 | 7470 | 100 | Plus |
| Diap2-RA | 1497 | CG8293-PA | 1..1494 | 17..1510 | 7470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:57:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap2-RB | 1997 | CG8293-RB | 39..1532 | 17..1510 | 7470 | 100 | Plus |
| Diap2-RA | 2106 | CG8293-RA | 148..1641 | 17..1510 | 7470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:57:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15932784..15933820 | 1424..388 | 5185 | 100 | Minus |
| 2R | 25286936 | 2R | 15934199..15934570 | 388..17 | 1860 | 100 | Minus |
| 2R | 25286936 | 2R | 15932635..15932721 | 1510..1424 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:57:48 has no hits.
BO08865.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:09:50 Download gff for
BO08865.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RB | 1..1497 | 17..1513 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:30:03 Download gff for
BO08865.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RB | 39..1537 | 17..1515 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:47:26 Download gff for
BO08865.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RA | 148..1641 | 17..1512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:09:50 Download gff for
BO08865.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RB | 39..1537 | 17..1515 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:11 Download gff for
BO08865.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diap2-RA | 148..1641 | 17..1512 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:11 Download gff for
BO08865.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15934199..15934570 | 17..388 | 100 | | Minus |
| 2R | 15932632..15932720 | 1425..1512 | 97 | <- | Minus |
| 2R | 15932784..15933819 | 389..1424 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:47:26 Download gff for
BO08865.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11820137..11820225 | 1425..1512 | 97 | <- | Minus |
| arm_2R | 11820289..11821324 | 389..1424 | 100 | <- | Minus |
| arm_2R | 11821704..11822075 | 17..388 | 100 | | Minus |
BO08865.pep Sequence
Translation from 16 to 1528
> BO08865.pep
MTELGMELESVRLATFGEWPLNAPVSAEDLVANGFFATGNWLEAECHFCH
VRIDRWEYGDQVAERHRRSSPICSMVLAPNHCGNVPRSQESDNEGNSVVD
SPESCSCPDLLLEANRLVTFKDWPNPNITPQALAKAGFYYLNRLDHVKCV
WCNGVIAKWEKNDNAFEEHKRFFPQCPRVQMGPLIEFATGKNLDELGIQP
TTLPLRPKYACVDARLRTFTDWPISNIQPASALAQAGLYYQKIGDQVRCF
HCNIGLRSWQKEDEPWFEHAKWSPKCQFVLLAKGPAYVSEVLATTAANAS
SQPATAPAPTLQADVLMDEAPAKEALALGIDGGVVRNAIQRKLLSSGCAF
STLDELLHDIFDDAGAGAALEVREPPEPSAPFIEPCQATTSKAASVPIPV
ADSIPAKPQAAEAVANISKITDEIQKMSVATPNGNLSLEEENRQLKDARL
CKVCLDEEVGVVFLPCGHLATCNQCAPSVANCPMCRADIKGFVRTFLSAS
FLDH
BO08865.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:42:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap2-PB | 498 | CG8293-PB | 1..498 | 1..498 | 2670 | 100 | Plus |
| Diap2-PA | 498 | CG8293-PA | 1..498 | 1..498 | 2670 | 100 | Plus |
| Diap1-PF | 438 | CG12284-PF | 44..438 | 9..498 | 403 | 28.6 | Plus |
| Diap1-PE | 438 | CG12284-PE | 44..438 | 9..498 | 403 | 28.6 | Plus |
| Diap1-PD | 438 | CG12284-PD | 44..438 | 9..498 | 403 | 28.6 | Plus |
