Clone BO08903 Report

Search the DGRC for BO08903

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:89
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptFK506-bp1-RA
Protein status:BO08903.pep: validated full length
Sequenced Size:1105

Clone Sequence Records

BO08903.3prime Sequence

909 bp (833 high quality bases) assembled on 2006-01-10

> BO08903.3prime
ATGGTCTAGAAAGCTTGCATGCACAGCTTTCAGTTCCACTTCGAAGACGA
GAGTGGAGTTCGGTCCGATCTTCGGTGGAGCTCCCCGTGCGCCGTACGCC
ATGTGCGGGGGGCAGGTAATGACTCGCTTGCCGCCCACCTTCATGCCGGC
GACTCCCACGTCCCAGCCCTTGATGACCTCTCCGCCGCCCAGGGCGAACT
TAAATGGTTTTCCCTTCAGGAGGCTGTCGAAGGTCTTGTTGTTCGACTGC
AGGCGGCCGATGTAGTAAACAGATACGCGTTTGCCCTGCTTGGCTTCTTC
GCCTTTGCCGACGACCTGATCCACAATCTTCACGCCTCCGGTGATAGTAC
GTGGATCCTTAGAAGCTGGTTGCTGCTTGGCTGGCTCCTTGGCCTTGGGT
TGTTCCTTCTTGGCCTCTGGCTTCTCCTTCTTCTTTTGCTGCTGCTTGGC
CTCCTCCTTCTTGGCCACACCGTTCTGCTCCTTGCCAGATTTCTTGGCGC
TAGCGCCAGGAGAGAGCTTGGCAACCTTGGCCTTTGGCTGTTCCTCTTCA
GCTTCGGAGTCGTCGCTGTCCTGTTCATCCTCCTCGCCACTCTCCTCGTT
ATCCTCATCAACATCGTCGTCATCTTCCTCCTCACCATTTTCGAGGAAGG
ACTCGTATTCCTCGATTATCTGGCTATCGTCATCAGTATCCTCCTCGTCC
TCCTCGCCGCTCTCATTCTCATCCTCATCATCTTCAGACTTTTTGCTATT
CTTGATCGCCTTGGAGTTCAGCAAATTCTCGATCGTCATTTGATCGTCAT
CCTCATCATCTTCGGAATCAATGTCGTGCAAGTAGCCCAACAGAGAAACG
CTGGCGTCGCCGGCGGTGTAGAACATGATGCGATCGCCCTTGCTGAAGTT
CAGGTCGAG

BO08903.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG6226-PA 1074 FK506-bp1-RA 181..1071 909..19 4455 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:23:04
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-RA 1299 CG6226-RA 286..1176 909..19 4455 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:23:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15331707..15332549 19..861 4215 100 Plus
3R 32079331 3R 15332615..15332664 860..909 250 100 Plus
Blast to na_te.dros performed on 2015-02-10 23:23:02 has no hits.

BO08903.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:56:29 Download gff for BO08903.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6226-PA 181..1074 18..909 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:54:49 Download gff for BO08903.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6226-PA 181..1074 18..909 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:31:24 Download gff for BO08903.3prime
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 286..1176 19..909 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:39:25 Download gff for BO08903.3prime
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 286..1176 19..909 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:39:25 Download gff for BO08903.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15331707..15332548 19..860 100 <- Plus
3R 15332616..15332664 861..909 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:31:24 Download gff for BO08903.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11157429..11158270 19..860 100 <- Plus
arm_3R 11158338..11158386 861..909 100   Plus

BO08903.5prime Sequence

913 bp (806 high quality bases) assembled on 2006-01-10

> BO08903.5prime
GAAGTTATCAGTCGACATGTCGATGTTTTGGGGTTTGAACATGAAGCCTG
AGCGCAAGTACTCGCAGACGATCATCAAGTCGTTCCACATCTCGGGCGTG
GCACTCGACAAGGGCCAGGAGGCCAAGTTGTACCTCGCTGCCGAGAAGCA
GGAGTACATCGTGGCCACCGTGACCAAGGCCATTCCACAGGTTGCGCTCG
ACCTGAACTTCAGCAAGGGCGATCGCATCATGTTCTACACCGCCGGCGAC
GCCAGCGTTTCTCTGTTGGGCTACTTGCACGACATTGATTCCGAAGATGA
TGAGGATGACGATCAAATGACGATCGAGAATTTGCTGAACTCCAAGGCGA
TCAAGAATAGCAAAAAGTCTGAAGATGATGAGGATGAGAATGAGAGCGGC
GAGGAGGACGAGGAGGATACTGATGACGATAGCCAGATAATCGAGGAATA
CGAGTCCTTCCTCGAAAATGGTGAGGAGGAAGATGACGACGATGTTGATG
AGGATAACGAGGAGAGTGGCGAGGAGGATGAACAGGACAGCGACGACTCC
GAAGCTGAAGAGGAACAGCCAAAGGCCAAGGTTGCCAAGCTCTCTCCTGG
CGCTAGCGCCAAGAAATCTGGCAAGGAGCAGAACGGTGTGGCCAAGAAGG
AGGAGGCCAAGCAGCAGCAAAAGAAGAAGGAGAAGCCAGAGGCCAAGAAG
GAACAACCCAAGGCCAAGGAGCCAGCCAAGCAGCAACCAGCTTCTAAGGA
TCCACGTACTATCACCGGAGGCGTGAAGATTGTGGATCAGGTCGTCGGCA
AAGGCGAAGAAGCCAAGCAGGGGCAACGCGTATCTGTTTACTACATCGGC
CGCCTGCAGTCGAACAACAAGACCTTCGACAGCCTCCTGAAAGGAAAACC
ATTTAAGTTCGCC

BO08903.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG6226-PA 1074 FK506-bp1-RA 1..897 17..913 4410 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-RA 1299 CG6226-RA 106..1002 17..913 4440 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:45:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15331881..15332549 913..245 3300 99.6 Minus
3R 32079331 3R 15332615..15332829 246..32 1075 100 Minus
Blast to na_te.dros performed on 2015-02-11 17:45:26 has no hits.

BO08903.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:56:30 Download gff for BO08903.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6226-PA 1..897 17..913 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:54:51 Download gff for BO08903.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6226-PA 1..897 17..913 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:20:54 Download gff for BO08903.5prime
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 98..1002 8..913 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:28:56 Download gff for BO08903.5prime
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 98..1002 8..913 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:28:56 Download gff for BO08903.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15331881..15332548 246..913 99 <- Minus
3R 15332616..15332828 33..245 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:20:54 Download gff for BO08903.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11157603..11158270 246..913 99 <- Minus
arm_3R 11158338..11158550 33..245 100 <- Minus

BO08903.complete Sequence

1105 bp (1105 high quality bases) assembled on 2006-01-18

GenBank Submission: FJ631309

> BO08903.complete
GAAGTTATCAGTCGACATGTCGATGTTTTGGGGTTTGAACATGAAGCCTG
AGCGCAAGTACTCGCAGACGATCATCAAGTCGTTCCACATCTCGGGCGTG
GCACTCGACAAGGGCCAGGAGGCCAAGTTGTACCTCGCTGCCGAGAAGCA
GGAGTACATCGTGGCCACCGTGACCAAGGCCATTCCACAGGTTGCGCTCG
ACCTGAACTTCAGCAAGGGCGATCGCATCATGTTCTACACCGCCGGCGAC
GCCAGCGTTTCTCTGTTGGGCTACTTGCACGACATTGATTCCGAAGATGA
TGAGGATGACGATCAAATGACGATCGAGAATTTGCTGAACTCCAAGGCGA
TCAAGAATAGCAAAAAGTCTGAAGATGATGAGGATGAGAATGAGAGCGGC
GAGGAGGACGAGGAGGATACTGATGACGATAGCCAGATAATCGAGGAATA
CGAGTCCTTCCTCGAAAATGGTGAGGAGGAAGATGACGACGATGTTGATG
AGGATAACGAGGAGAGTGGCGAGGAGGATGAACAGGACAGCGACGACTCC
GAAGCTGAAGAGGAACAGCCAAAGGCCAAGGTTGCCAAGCTCTCTCCTGG
CGCTAGCGCCAAGAAATCTGGCAAGGAGCAGAACGGTGTGGCCAAGAAGG
AGGAGGCCAAGCAGCAGCAAAAGAAGAAGGAGAAGCCAGAGGCCAAGAAG
GAACAACCCAAGGCCAAGGAGCCAGCCAAGCAGCAACCAGCTTCTAAGGA
TCCACGTACTATCACCGGAGGCGTGAAGATTGTGGATCAGGTCGTCGGCA
AAGGCGAAGAAGCCAAGCAGGGCAAACGCGTATCTGTTTACTACATCGGC
CGCCTGCAGTCGAACAACAAGACCTTCGACAGCCTCCTGAAGGGAAAACC
ATTTAAGTTCGCCCTGGGCGGCGGAGAGGTCATCAAGGGCTGGGACGTGG
GAGTCGCCGGCATGAAGGTGGGCGGCAAGCGAGTCATTACCTGCCCCCCG
CACATGGCGTACGGCGCACGGGGAGCTCCACCGAAGATCGGACCGAACTC
CACTCTCGTCTTCGAAGTGGAACTGAAAGCTGTGCATGCAAGCTTTCTAG
ACCAT

BO08903.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:27:37
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-RA 1074 CG6226-PA 1..1071 17..1087 5355 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-RA 1299 CG6226-RA 106..1176 17..1087 5355 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15331707..15332549 1087..245 4215 100 Minus
3R 32079331 3R 15332615..15332829 246..32 1075 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:27:36 has no hits.

BO08903.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:09:34 Download gff for BO08903.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 1..1074 17..1088 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:29:45 Download gff for BO08903.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 107..1185 8..1087 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:15:39 Download gff for BO08903.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 106..1176 17..1089 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:09:34 Download gff for BO08903.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 107..1185 8..1087 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:04 Download gff for BO08903.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 106..1176 17..1089 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:04 Download gff for BO08903.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15331705..15332548 246..1089 99 <- Minus
3R 15332616..15332828 33..245 100 <- Minus
3R 15333013..15333028 17..32 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:15:39 Download gff for BO08903.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11157427..11158270 246..1089 99 <- Minus
arm_3R 11158338..11158550 33..245 100 <- Minus
arm_3R 11158735..11158750 17..32 100   Minus

BO08903.pep Sequence

Translation from 16 to 1105

> BO08903.pep
MSMFWGLNMKPERKYSQTIIKSFHISGVALDKGQEAKLYLAAEKQEYIVA
TVTKAIPQVALDLNFSKGDRIMFYTAGDASVSLLGYLHDIDSEDDEDDDQ
MTIENLLNSKAIKNSKKSEDDEDENESGEEDEEDTDDDSQIIEEYESFLE
NGEEEDDDDVDEDNEESGEEDEQDSDDSEAEEEQPKAKVAKLSPGASAKK
SGKEQNGVAKKEEAKQQQKKKEKPEAKKEQPKAKEPAKQQPASKDPRTIT
GGVKIVDQVVGKGEEAKQGKRVSVYYIGRLQSNNKTFDSLLKGKPFKFAL
GGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGARGAPPKIGPNSTLVFE
VELKAVHASFLDH

BO08903.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:43:04
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-PA 357 CG6226-PA 1..357 1..357 1834 100 Plus
FK506-bp2-PA 108 CG11001-PA 2..107 252..356 241 48.1 Plus
Fkbp14-PF 216 CG9847-PF 39..129 264..353 220 47.3 Plus
Fkbp14-PE 216 CG9847-PE 39..129 264..353 220 47.3 Plus
CG14715-PA 138 CG14715-PA 17..126 242..353 216 45.1 Plus