Clone Sequence Records
BO08931.3prime Sequence
789 bp (738 high quality bases) assembled on 2006-01-10
> BO08931.3prime
ATGGTCTAGAAAGCTTGCATCGTCGAAGAATAGTATTTCTAGGATCCGTT
TCTGTGCACTTTTCTTCCGTTCCTTGTTCATTTTCAGCAGTTCCGTGGTG
ACTAATTCTCCCAGCAAATGCTCAGACAACCGCTGCACACCCGGATGATT
GGGCGGCGCCTGGAATTTCCCGAAGTTTGCGGGATGCGAACTGCTGGCCT
GATGTGGGAACTGCTGGTATAACTGGAAAAGGAAGTCCGTGTTTGACGGA
AACATGTTCTGGTGCTGTTGCTGCTGCTGGTTGTTGTGGCTATTATTGCC
GCTGGGATTGTTGCTCCCGCTATTGCTGCTACTGTTATTCCCATTTCCAT
TGCCCCGCTGCATGGGCATCGAATTGCTGTAGTGATTCTCCTGCTGCATC
ATAGCCTGCGGCTCCATCAGATCATGGCTGTTCTCATCGGATTCGTCGTC
CGAGTCATTGCCAAAGTGACTACCATTGCTGGTCATCTGGTTATGGGCAT
TGCCATTTAGTTGAATACGGGGTTTCTTCATATGGAAATGGCTCGATGAC
GAAGAGTCTAGACCATCGCCCTTGGGGTTATAGACATGTGACTGTTGCAT
CTGCAGAGTGGAACTGTTGCCGATGGAAGCGCCCGTGGCGCTGGAAGAGG
AATGTACCACCGGAAGCTGCTGTTCAGATGCCGGCGACTGTTGCTGCGCT
TGTTGCTGCTGCTGCTGCTGTTGTTGTTGCGTCTGCTGCTGAAGATGATG
GGATCCTGCCCCAATTCCTTGCAGCGGCGACGACAGCGG
BO08931.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:32:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-PA | 1521 | CG7745-RA | 748..1518 | 789..19 | 3830 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 14:30:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1893 | CG7745-RA | 816..1586 | 789..19 | 3840 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 14:30:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11308752..11309522 | 789..19 | 3840 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-08 14:30:34 has no hits.
BO08931.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:57:14 Download gff for
BO08931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-PA | 748..1521 | 15..789 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:55:52 Download gff for
BO08931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-PA | 748..1521 | 15..789 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:56:39 Download gff for
BO08931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 816..1591 | 14..789 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:37:04 Download gff for
BO08931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 816..1591 | 14..789 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 15:37:04 Download gff for
BO08931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11308752..11309527 | 14..789 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:56:39 Download gff for
BO08931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7196257..7197032 | 14..789 | 99 | | Minus |
BO08931.5prime Sequence
985 bp (818 high quality bases) assembled on 2006-01-10
> BO08931.5prime
GAAGTTATCAGTCGACATGATGGATGAGCAGCTAATTGACGAGGTAGCGC
AGCACGGAGTGATCTACAACCGGCAGAAGTACTACCTCAACGGCGGCGCC
AATGGTGGCAAGTACGAGACGAAGGACGAGGCCTGGCAGCTGATTGCGAT
GAAGCTGCGCACGGATGTGGACACGTGCAAGAAGCGGTGGAAGTACCTAC
GCGAACGCTACGTGTCGCAGCGGAAGCAGGGCGATCCACCTGTCTACGAA
CACCTGTCGCGTCCATACCTGGAGAAAATGAAGTTCTTGGACCAGCACAT
CCAGCCGCGCAAGTCCTACCGCCATGTGCCGAACTTCCTAACATCTCCAC
AGTCCGCCAACAGCTCCGGCTACAACGAATACCAGGTTGATAAGTCCAAT
GGCTCCATGAAGAATGTGTCTCAGTTTGGCAGCTCAGGGCAAAGTCATCT
TTACCACCAGCCGGATCAGCAACACGCAATGAGTGCTCTGAGTAACGTTG
CTGCATCTGCGCTGGAAAACGTCAATGGCCAGGTGAAGATCGAGGCGGAC
CAGGTGTTCAGGGATTTTGCGGCTGCCGTGGCCTCACAGCAGCTCCAGCA
CATATCACAGTCACAAATGCAGCAACAGGCGGCGGCCGTTGCAGCTGTAA
TGGCTGATTCCTCGCAAGGTTATCAGGATCAATACAAGGATGGCTCCGTG
GGCATGAACGGGGCCCAGAACAGCGCTGGCAGTCTGACCTCAACATCATC
CTCGATGAAATCACCGCTGTCGTCGCCGCTGCAAGGAATTGGGGCAGGAT
CCCATCATCCTCAGCAGCAGACGCAACAACAACAGCAGCAGCAGCAGCAA
CAAGCGCAGCAACAGTCGCCGGCATCTGAACAGCAGCTTCCGGTGGTACA
TTCCTCTTCCAGCGCCACGGGCGCTTCCATCGGCAACAGTTCCACTCTGC
AGATGCAACAGTCACATGTCTATAACCCCAAGGGC
BO08931.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:32:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-PA | 1521 | CG7745-RA | 1..969 | 17..985 | 4845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:56:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1893 | CG7745-RA | 69..1037 | 17..985 | 4845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:56:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11308155..11308973 | 167..985 | 4095 | 100 | Plus |
| 2R | 25286936 | 2R | 11307947..11308097 | 17..167 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:56:55 has no hits.
BO08931.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:57:15 Download gff for
BO08931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-PA | 1..969 | 17..985 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:55:54 Download gff for
BO08931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-PA | 1..969 | 17..985 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:25:26 Download gff for
BO08931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1037 | 17..985 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:12:06 Download gff for
BO08931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1037 | 17..985 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:12:06 Download gff for
BO08931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11307947..11308097 | 17..167 | 100 | -> | Plus |
| 2R | 11308156..11308973 | 168..985 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:25:26 Download gff for
BO08931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7195452..7195602 | 17..167 | 100 | -> | Plus |
| arm_2R | 7195661..7196478 | 168..985 | 100 | | Plus |
BO08931.complete Sequence
1552 bp (1552 high quality bases) assembled on 2006-01-18
GenBank Submission: FJ631321
> BO08931.complete
GAAGTTATCAGTCGACATGATGGATGAGCAGCTAATTGACGAGGTAGCGC
AGCACGGAGTGATCTACAACCGGCAGAAGTACTACCTCAACGGCGGCGCC
AATGGTGGCAAGTACGAGACGAAGGACGAGGCCTGGCAGCTGATTGCGAT
GAAGCTGCGCACGGATGTGGACACGTGCAAGAAGCGGTGGAAGTACCTAC
GCGAACGCTACGTGTCGCAGCGGAAGCAGGGCGATCCACCTGTCTACGAA
CACCTGTCGCGTCCATACCTGGAGAAAATGAAGTTCTTGGACCAGCACAT
CCAGCCGCGCAAGTCCTACCGCCATGTGCCGAACTTCCTAACATCTCCAC
AGTCCGCCAACAGCTCCGGCTACAACGAATACCAGGTTGATAAGTCCAAT
GGCTCCATGAAGAATGTGTCTCAGTTTGGCAGCTCAGGGCAAAGTCATCT
TTACCACCAGCCGGATCAGCAACACGCAATGAGTGCTCTGAGTAACGTTG
CTGCATCTGCGCTGGAAAACGTCAATGGCCAGGTGAAGATCGAGGCGGAC
CAGGTGTTCAGGGATTTTGCGGCTGCCGTGGCCTCACAGCAGCTCCAGCA
CATATCACAGTCACAAATGCAGCAACAGGCGGCGGCCGTTGCAGCTGTAA
TGGCTGATTCCTCGCAAGGTTATCAGGATCAATACAAGGATGGCTCCGTG
GGCATGAACGGGGCCCAGAACAGCGCTGGCAGTCTGACCTCAACATCATC
CTCGATGAAATCACCGCTGTCGTCGCCGCTGCAAGGAATTGGGGCAGGAT
CCCATCATCCTCAGCAGCAGACGCAACAACAACAGCAGCAGCAGCAGCAA
CAAGCGCAGCAACAGTCGCCGGCATCTGAACAGCAGCTTCCGGTGGTACA
TTCCTCTTCCAGCGCCACGGGCGCTTCCATCGGCAACAGTTCCACTCTGC
AGATGCAACAGTCACATGTCTATAACCCCAAGGGCGATGGTCTAGACTCT
TCGTCATCGAGCCATTTCCATATGAAGAAACCCCGTATTCAACTAAATGG
CAATGCCCATAACCAGATGACCAGCAATGGTAGTCACTTTGGCAATGACT
CGGACGACGAATCCGATGAGAACAGCCATGATCTGATGGAGCCGCAGGCT
ATGATGCAGCAGGAGAATCACTACAGCAATTCGATGCCCATGCAGCGGGG
CAATGGAAATGGGAATAACAGTAGCAGCAATAGCGGGAGCAACAATCCCA
GCGGCAATAATAGCCACAACAACCAGCAGCAGCAACAGCACCAGAACATG
TTTCCGTCAAACACGGACTTCCTTTTCCAGTTATACCAGCAGTTCCCACA
TCAGGCCAGCAGTTCGCATCCCGCAAACTTCGGGAAATTCCAGGCGCCGC
CCAATCATCCGGGTGTGCAGCGGTTGTCTGAGCATTTGCTGGGAGAATTA
GTCACCACGGAACTGCTGAAAATGAACAAGGAACGGAAGAAAAGTGCACA
GAAACGGATCCTAGAAATACTATTCTTCGACGATGCAAGCTTTCTAGACC
AT
BO08931.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1521 | CG7745-PA | 1..1518 | 17..1534 | 7590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:07:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1893 | CG7745-RA | 69..1586 | 17..1534 | 7590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:07:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11308155..11309522 | 167..1534 | 6840 | 100 | Plus |
| 2R | 25286936 | 2R | 11307947..11308097 | 17..167 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 11:07:51 has no hits.
BO08931.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:09:30 Download gff for
BO08931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 1..1521 | 17..1538 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:29:40 Download gff for
BO08931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 64..1586 | 17..1539 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:45:06 Download gff for
BO08931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1586 | 17..1536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:09:30 Download gff for
BO08931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 64..1586 | 17..1539 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:25 Download gff for
BO08931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1586 | 17..1536 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:39:25 Download gff for
BO08931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11307947..11308097 | 17..167 | 100 | -> | Plus |
| 2R | 11308156..11309522 | 168..1536 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:45:06 Download gff for
BO08931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7195452..7195602 | 17..167 | 100 | -> | Plus |
| arm_2R | 7195661..7197027 | 168..1536 | 99 | | Plus |
BO08931.pep Sequence
Translation from 16 to 1552
> BO08931.pep
MMDEQLIDEVAQHGVIYNRQKYYLNGGANGGKYETKDEAWQLIAMKLRTD
VDTCKKRWKYLRERYVSQRKQGDPPVYEHLSRPYLEKMKFLDQHIQPRKS
YRHVPNFLTSPQSANSSGYNEYQVDKSNGSMKNVSQFGSSGQSHLYHQPD
QQHAMSALSNVAASALENVNGQVKIEADQVFRDFAAAVASQQLQHISQSQ
MQQQAAAVAAVMADSSQGYQDQYKDGSVGMNGAQNSAGSLTSTSSSMKSP
LSSPLQGIGAGSHHPQQQTQQQQQQQQQQAQQQSPASEQQLPVVHSSSSA
TGASIGNSSTLQMQQSHVYNPKGDGLDSSSSSHFHMKKPRIQLNGNAHNQ
MTSNGSHFGNDSDDESDENSHDLMEPQAMMQQENHYSNSMPMQRGNGNGN
NSSSNSGSNNPSGNNSHNNQQQQQHQNMFPSNTDFLFQLYQQFPHQASSS
HPANFGKFQAPPNHPGVQRLSEHLLGELVTTELLKMNKERKKSAQKRILE
ILFFDDASFLDH
BO08931.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:43:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-PA | 506 | CG7745-PA | 1..506 | 1..506 | 2646 | 100 | Plus |
