Clone BO08967 Report

Search the DGRC for BO08967

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:89
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG31637-RA
Protein status:BO08967.pep: validated full length
Sequenced Size:1492

Clone Sequence Records

BO08967.3prime Sequence

883 bp (879 high quality bases) assembled on 2006-01-10

> BO08967.3prime
ATGGTCTAGAAAGCTTGCCGTGAACGGTGGCGGCATAACCATCGGATCGA
AGGTCTGCTGGGTGGTGGAGAAGTTGTTGAAGTTCTCGATGCGGCGATAG
CCCCACAAATCCATCGCTTCAGTGCAGACATCCTGGATTTGCTTGATCTC
TTCTGGCTTGAGATCCTGCATCCAATGGAATGGCGCTGATCTGGAATCTC
GATATGTGGAACTGACACCTCCAATGTTGACCTTGGTGTGCGTGTCCAAA
AACTCCTCCACTGCAGGATCAAATGGCAAGCCATAGAACTGCAAGATGTC
CTGGGTCATCTCACTGGGACTCAAGGATAGGTCCTCATAACGAACAGTCC
TAAAACGAGACGGATATTTCAGCAACAGCACCTCCGCTGTCTTGTAGTCA
TCCCGCAGATCCTGGCACACCAGTCGTGGATCCTCGCAGTCCTCGTTGCC
TCCGCACCACACTCGATGTCGCCTCGACTGCATCGTACCTCGTGGATCTC
GCACCAGCAGCACGATCCGCACGCTGGAGAGACTTTGGTCCTCGAGCAGC
TTTTCGGCCTGGGCGAGTCGCAGGCGGACGGTCTTCATGCTCTGGATGGG
GAAGAGGCGGCAGAAGCGCGTGAGGAAGGCTGGACGCCAGCAGAAGCGCG
GGAACTCCCGGCAGACGTCCCACAGTCGGGTGTTGTGCTCGAACAGATAG
GTGTGCGTCTTGCCGAAGTTCAGATAGTCGATCATGTCGGCGTAGTCGCA
GTTGAGCAGGTTCTTCAGGTTCTGCACGGCCAGCTCCTGATCGTCAGGAT
CGCGGATCTGCTTGATGCCGAAGTCGAGCAGCGGCTCATAGTGATAGAAG
TTGCCCGGTATCGAGTTGAGAATGTCACCCAGG

BO08967.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:32:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG31637-PA 1461 CG31637-RA 594..1458 883..19 4325 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 14:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG31637-RB 2595 CG31637-RB 823..1687 883..19 4325 100 Minus
CG31637-RA 2672 CG31637-RA 823..1687 883..19 4325 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 14:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6499469..6499819 883..533 1755 100 Minus
2L 23513712 2L 6525617..6525820 351..148 1020 100 Minus
2L 23513712 2L 6525366..6525551 534..349 930 100 Minus
2L 23513712 2L 6525881..6526011 149..19 655 100 Minus
Blast to na_te.dros performed on 2015-02-08 14:35:02 has no hits.

BO08967.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:58:04 Download gff for BO08967.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31637-PA 594..1461 16..883 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:57:01 Download gff for BO08967.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31637-PA 594..1461 16..883 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:57:24 Download gff for BO08967.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31637-RA 823..1701 6..883 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:37:41 Download gff for BO08967.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31637-RA 823..1701 6..883 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 15:37:41 Download gff for BO08967.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6499469..6499819 533..883 100 -> Minus
2L 6525368..6525550 350..532 100 -> Minus
2L 6525619..6525820 148..349 100 -> Minus
2L 6525883..6526025 6..147 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:57:24 Download gff for BO08967.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6499469..6499819 533..883 100 -> Minus
arm_2L 6525368..6525550 350..532 100 -> Minus
arm_2L 6525619..6525820 148..349 100 -> Minus
arm_2L 6525883..6526025 6..147 96   Minus

BO08967.5prime Sequence

961 bp (818 high quality bases) assembled on 2006-01-10

> BO08967.5prime
GAAGTTATCAGTCGACATGAGCACGGGCATTGGCAGCAGCAGCAGCAGCA
CGGAGGAGCAGCAGCACCTGGAACTGAGCGCGGACTTGGAGGCGTGCTCC
CTGCTTGGCCCGCAGGACCCGTCGAACGTCGATACCGGCAGGACACGCGC
TAAGCAGCGACTCAGCTTGAACGGAAAGCGGCGCCGCAGCCGGATGTCGC
GCAGGGCCAATCTGATCGGCATCTGCGGCGTGAGCAGCCTGTGCATCCTG
CTGCTGATCGCCACCACCCAGCACCGTCCGCTGACCACGCCGTTTAATCA
GTCGGCTGGGCGGGATCAGGGCGCGTCCGTAGATGGCGGTCCATCCAATT
CGCTGGCGCGCAGCGCCTTCTACGATCGCTTCCAGCAGCAATTGCAGCAG
CAGCAGCAGTCGTCGCAGACGGCCGTCTACAATCTGACAGCTACTATAGT
GGATGTCCTGTCGGCTCAACGGTCGCGCATCCTGGCCGAAATGGAGAACT
TCGAGTATCCGCGCGGCGGCGCCGAGCGTCTGACGGACATGACGCCGGAG
ACGAACGGCACCCCGGTGCGCAGTGTGGTGGTCACCTCATGGCGCTCCGG
CTCCACCTTCCTGGGTGACATTCTCAACTCGATACCGGGCAACTTCTATC
ACTATGAGCCGCTGCTCGACTTCGGCATCAAGCAGATCCGCGATCCTGAC
GATCAGGAGCTGGCCGTGCAGAACCTGAAGAACCTGCTCAACTGCGACTA
CGCCGACATGATCGACTATCTGAACTTCGGCAAGACGCACACCTATCTGT
TCGAGCACAACACCCGACTGTGGGACGTCTGCCGGGAGTTCCCGCGCTTC
TGCTGGCGTCCAGCCTCCTCACGCGCTTCTGCCGCCTCTTCCCATCCAGA
GCATGAAGACCGTCCGCCTGCGACTCGCCCAGCCGGAAAGCTGCTCGAGG
ACAAAGTCTCT

BO08967.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:32:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG31637-PA 1461 CG31637-RA 1..850 17..866 4250 100 Plus
CG31637-PA 1461 CG31637-RA 877..918 891..932 210 100 Plus
CG31637-PA 1461 CG31637-RA 851..878 866..893 140 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:45:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG31637-RB 2595 CG31637-RB 230..1178 17..961 4630 99.5 Plus
CG31637-RA 2672 CG31637-RA 230..1178 17..961 4630 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:45:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6498876..6499814 17..952 4530 99.6 Plus
Blast to na_te.dros performed on 2015-02-11 17:45:46 has no hits.

BO08967.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:58:05 Download gff for BO08967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31637-PA 1..949 17..961 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:57:02 Download gff for BO08967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31637-PA 1..949 17..961 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:20:58 Download gff for BO08967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31637-RA 230..1178 17..961 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:30:27 Download gff for BO08967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31637-RA 230..1178 17..961 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:30:27 Download gff for BO08967.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6498876..6499821 17..961 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:20:58 Download gff for BO08967.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6498876..6499821 17..961 99   Plus

BO08967.complete Sequence

1492 bp (1492 high quality bases) assembled on 2006-01-18

GenBank Submission: FJ631337

> BO08967.complete
GAAGTTATCAGTCGACATGAGCACGGGCATTGGCAGCAGCAGCAGCAGCA
CGGAGGAGCAGCAGCACCTGGAACTGAGCGCGGACTTGGAGGCGTGCTCC
CTGCTTGGCCCGCAGGACCCGTCGAACGTCGATACCGGCAGGACACGCGC
TAAGCAGCGACTCAGCTTGAACGGAAAGCGGCGCCGCAGCCGGATGTCGC
GCAGGGCCAATCTGATCGGCATCTGCGGCGTGAGCAGCCTGTGCATCCTG
CTGCTGATCGCCACCACCCAGCACCGTCCGCTGACCACGCCGTTTAATCA
GTCGGCTGGGCGGGATCAGGGCGCGTCCGTAGATGGCGGTCCATCCAATT
CGCTGGCGCGCAGCGCCTTCTACGATCGCTTCCAGCAGCAATTGCAGCAG
CAGCAGCAGTCGTCGCAGACGGCCGTCTACAATCTGACAGCTACTATAGT
GGATGTCCTGTCGGCTCAACGGTCGCGCATCCTGGCCGAAATGGAGAACT
TCGAGTATCCGCGCGGCGGCGCCGAGCGTCTGACGGACATGACGCCGGAG
ACGAACGGCACCCCGGTGCGCAGTGTGGTGGTCACCTCATGGCGCTCCGG
CTCCACCTTCCTGGGTGACATTCTCAACTCGATACCGGGCAACTTCTATC
ACTATGAGCCGCTGCTCGACTTCGGCATCAAGCAGATCCGCGATCCTGAC
GATCAGGAGCTGGCCGTGCAGAACCTGAAGAACCTGCTCAACTGCGACTA
CGCCGACATGATCGACTATCTGAACTTCGGCAAGACGCACACCTATCTGT
TCGAGCACAACACCCGACTGTGGGACGTCTGCCGGGAGTTCCCGCGCTTC
TGCTGGCGTCCAGCCTTCCTCACGCGCTTCTGCCGCCTCTTCCCCATCCA
GAGCATGAAGACCGTCCGCCTGCGACTCGCCCAGGCCGAAAAGCTGCTCG
AGGACCAAAGTCTCTCCAGCGTGCGGATCGTGCTGCTGGTGCGAGATCCA
CGAGGTACGATGCAGTCGAGGCGACATCGAGTGTGGTGCGGAGGCAACGA
GGACTGCGAGGATCCACGACTGGTGTGCCAGGATCTGCGGGATGACTACA
AGACAGCGGAGGTGCTGTTGCTGAAATATCCGTCTCGTTTTAGGACTGTT
CGTTATGAGGACCTATCCTTGAGTCCCAGTGAGATGACCCAGGACATCTT
GCAGTTCTATGGCTTGCCATTTGATCCTGCAGTGGAGGAGTTTTTGGACA
CGCACACCAAGGTCAACATTGGAGGTGTCAGTTCCACATATCGAGATTCC
AGATCAGCGCCATTCCATTGGATGCAGGATCTCAAGCCAGAAGAGATCAA
GCAAATCCAGGATGTCTGCACTGAAGCGATGGATTTGTGGGGCTATCGCC
GCATCGAGAACTTCAACAACTTCTCCACCACCCAGCAGACCTTCGATCCG
ATGGTTATGCCGCCACCGTTCACGGCAAGCTTTCTAGACCAT

BO08967.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG31637-RB 1461 CG31637-PB 1..1458 17..1474 7290 100 Plus
CG31637-RA 1461 CG31637-PA 1..1458 17..1474 7290 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31637-RB 2595 CG31637-RB 230..1687 17..1474 7290 100 Plus
CG31637-RA 2672 CG31637-RA 230..1687 17..1474 7290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:33:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6498876..6499819 17..960 4720 100 Plus
2L 23513712 2L 6525617..6525820 1142..1345 1020 100 Plus
2L 23513712 2L 6525366..6525551 959..1144 930 100 Plus
2L 23513712 2L 6525881..6526011 1344..1474 655 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:33:19 has no hits.

BO08967.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:09:11 Download gff for BO08967.complete
Subject Subject Range Query Range Percent Splice Strand
CG31637-RA 1..1461 17..1477 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:56:26 Download gff for BO08967.complete
Subject Subject Range Query Range Percent Splice Strand
CG31637-RA 235..1692 17..1476 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:31 Download gff for BO08967.complete
Subject Subject Range Query Range Percent Splice Strand
CG31637-RA 230..1687 17..1476 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:09:12 Download gff for BO08967.complete
Subject Subject Range Query Range Percent Splice Strand
CG31637-RA 235..1706 17..1487 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:20:26 Download gff for BO08967.complete
Subject Subject Range Query Range Percent Splice Strand
CG31637-RA 230..1687 17..1476 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:20:26 Download gff for BO08967.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6498876..6499819 17..960 100 -> Plus
2L 6525368..6525550 961..1143 100 -> Plus
2L 6525619..6525820 1144..1345 100 -> Plus
2L 6525883..6526011 1346..1476 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:31 Download gff for BO08967.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6498876..6499819 17..960 100 -> Plus
arm_2L 6525368..6525550 961..1143 100 -> Plus
arm_2L 6525619..6525820 1144..1345 100 -> Plus
arm_2L 6525883..6526011 1346..1476 98   Plus

BO08967.pep Sequence

Translation from 16 to 1492

> BO08967.pep
MSTGIGSSSSSTEEQQHLELSADLEACSLLGPQDPSNVDTGRTRAKQRLS
LNGKRRRSRMSRRANLIGICGVSSLCILLLIATTQHRPLTTPFNQSAGRD
QGASVDGGPSNSLARSAFYDRFQQQLQQQQQSSQTAVYNLTATIVDVLSA
QRSRILAEMENFEYPRGGAERLTDMTPETNGTPVRSVVVTSWRSGSTFLG
DILNSIPGNFYHYEPLLDFGIKQIRDPDDQELAVQNLKNLLNCDYADMID
YLNFGKTHTYLFEHNTRLWDVCREFPRFCWRPAFLTRFCRLFPIQSMKTV
RLRLAQAEKLLEDQSLSSVRIVLLVRDPRGTMQSRRHRVWCGGNEDCEDP
RLVCQDLRDDYKTAEVLLLKYPSRFRTVRYEDLSLSPSEMTQDILQFYGL
PFDPAVEEFLDTHTKVNIGGVSSTYRDSRSAPFHWMQDLKPEEIKQIQDV
CTEAMDLWGYRRIENFNNFSTTQQTFDPMVMPPPFTASFLDH

BO08967.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:43:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG31637-PB 486 CG31637-PB 1..486 1..486 2556 100 Plus
CG31637-PA 486 CG31637-PA 1..486 1..486 2556 100 Plus
CG9550-PA 363 CG9550-PA 54..359 172..480 500 35.4 Plus