Clone BO09014 Report

Search the DGRC for BO09014

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:90
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG6144-RB
Protein status:BO09014.pep: validated full length
Sequenced Size:718

Clone Sequence Records

BO09014.3prime Sequence

716 bp (715 high quality bases) assembled on 2006-01-10

> BO09014.3prime
ATGGTCTAGAAAGCTTGCGCAGAACTTGAGCTTCATCTTGCTGGTCTTGG
GCACATTACGGATGGTGAGGGAGATGCGCGGCGATCGGCGTACTAAGTGA
TCCCCGATCTTGTAGGTATTCTCGCACAGATCGTAGTTGGAGATGCGATC
GCAGAGCACATCCTCGCTAGTCTCGGAGATGGCGTGCAGATAGTCGGTGT
ACAGCGTGTCCTTGAGGATGAGCAGGCTGCGCGGTTCCAGCAGCAGCTTG
AAGAGCACTTCACGGGTCGTCTGATCTCCAGCTTCTGTTTCAGTTGTGGT
GTCCTCACGCTTGACAAACTCCAGCACGGTATGAGCACCCGTGGAAATGG
TGGAGATGATGGGATGGAACAGTGGTCCATCTGTGTGCGGCAGAATTCCC
TGACCCGGCAGATACTCGTTGACCAAAACATGGTTAGCGTTCTGCGACTC
GAACACCCCCAGATTGTTGACCTTGTCCACATAGGTCTGCAGCCACTCCG
GAATCTCCTCGGCAATCATTCCGTTGGGATGCGGCACACCGCCGTAGTTG
ACCAGCCGGCGGTTCAGCAGCTGCGTCCATCGAGGCTTCGGAGTGCGCTC
GATGTGGCTCAGGATGCGCTGCTCCTCCTCGGAAGTGATGAAGTTCGGAA
TGTACATGACAGTCGGTGGGCACTTTCGCACTTCAAAGCCCGTGAAATCC
ATGTCGACTGATAACT

BO09014.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:33:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG6144-PA 687 CG6144-RA 1..684 702..19 3420 100 Minus
CG6144-PB 687 CG6144-RB 1..684 702..19 3420 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG6144-RC 1553 CG6144-RC 113..797 703..19 3425 100 Minus
CG6144-RB 1705 CG6144-RB 265..949 703..19 3425 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:22:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10489050..10489705 674..19 3280 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:22:27 has no hits.

BO09014.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:59:15 Download gff for BO09014.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-PB 1..687 18..702 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:58:44 Download gff for BO09014.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-PB 1..687 18..702 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:59:54 Download gff for BO09014.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 265..955 11..703 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:07:49 Download gff for BO09014.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 265..955 11..703 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:07:49 Download gff for BO09014.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10488958..10488988 673..703 100 -> Minus
2L 10489052..10489711 11..672 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:59:54 Download gff for BO09014.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10488958..10488988 673..703 100 -> Minus
arm_2L 10489052..10489711 11..672 99   Minus

BO09014.5prime Sequence

716 bp (715 high quality bases) assembled on 2006-01-10

> BO09014.5prime
GAAGTTATCAGTCGACATGGATTTCACGGGCTTTGAAGTGCGAAAGTGCC
CACCGACTGTCATGTACATTCCGAACTTCATCACTTCCGAGGAGGAGCAG
CGCATCCTGAGCCACATCGAGCGCACTCCGAAGCCTCGATGGACGCAGCT
GCTGAACCGCCGGCTGGTCAACTACGGCGGTGTGCCGCATCCCAACGGAA
TGATTGCCGAGGAGATTCCGGAGTGGCTGCAGACCTATGTGGACAAGGTC
AACAATCTGGGGGTGTTCGAGTCGCAGAACGCTAACCATGTTTTGGTCAA
CGAGTATCTGCCGGGTCAGGGAATTCTGCCGCACACAGATGGACCACTGT
TCCATCCCATCATCTCCACCATTTCCACGGGTGCTCATACCGTGCTGGAG
TTTGTCAAGCGTGAGGACACCACAACTGAAACAGAAGCTGGAGATCAGAC
GACCCGTGAAGTGCTCTTCAAGCTGCTGCTGGAACCGCGCAGCCTGCTCA
TCCTCAAGGACACGCTGTACACCGACTATCTGCACGCCATCTCCGAGACT
AGCGAGGATGTGCTCTGCGATCGCATCTCCAACTACGATCTGTGCGAGAA
TACCTACAAGATCGGGGATCACTTAGTACGCCGATCGCCGCGCATCTCCC
TCACCATCCGTAATGTGCCCAAGACCAGCAAGATGAAGCTCAAGTTCTGC
GCAAGCTTTCTAGACC

BO09014.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:33:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG6144-PA 687 CG6144-RA 1..684 17..700 3420 100 Plus
CG6144-PB 687 CG6144-RB 1..684 17..700 3420 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:43:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG6144-RC 1553 CG6144-RC 113..797 16..700 3425 100 Plus
CG6144-RB 1705 CG6144-RB 265..949 16..700 3425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10489050..10489705 45..700 3280 100 Plus
Blast to na_te.dros performed on 2015-02-12 01:43:15 has no hits.

BO09014.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:59:16 Download gff for BO09014.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-PB 1..687 17..701 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:58:46 Download gff for BO09014.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-PB 1..687 17..701 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:50:17 Download gff for BO09014.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 265..955 16..708 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:42:29 Download gff for BO09014.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 265..955 16..708 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:42:29 Download gff for BO09014.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10488958..10488988 16..46 100 -> Plus
2L 10489052..10489711 47..708 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:50:17 Download gff for BO09014.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10488958..10488988 16..46 100 -> Plus
arm_2L 10489052..10489711 47..708 99   Plus

BO09014.complete Sequence

718 bp (718 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ631352

> BO09014.complete
GAAGTTATCAGTCGACATGGATTTCACGGGCTTTGAAGTGCGAAAGTGCC
CACCGACTGTCATGTACATTCCGAACTTCATCACTTCCGAGGAGGAGCAG
CGCATCCTGAGCCACATCGAGCGCACTCCGAAGCCTCGATGGACGCAGCT
GCTGAACCGCCGGCTGGTCAACTACGGCGGTGTGCCGCATCCCAACGGAA
TGATTGCCGAGGAGATTCCGGAGTGGCTGCAGACCTATGTGGACAAGGTC
AACAATCTGGGGGTGTTCGAGTCGCAGAACGCTAACCATGTTTTGGTCAA
CGAGTATCTGCCGGGTCAGGGAATTCTGCCGCACACAGATGGACCACTGT
TCCATCCCATCATCTCCACCATTTCCACGGGTGCTCATACCGTGCTGGAG
TTTGTCAAGCGTGAGGACACCACAACTGAAACAGAAGCTGGAGATCAGAC
GACCCGTGAAGTGCTCTTCAAGCTGCTGCTGGAACCGCGCAGCCTGCTCA
TCCTCAAGGACACGCTGTACACCGACTATCTGCACGCCATCTCCGAGACT
AGCGAGGATGTGCTCTGCGATCGCATCTCCAACTACGATCTGTGCGAGAA
TACCTACAAGATCGGGGATCACTTAGTACGCCGATCGCCGCGCATCTCCC
TCACCATCCGTAATGTGCCCAAGACCAGCAAGATGAAGCTCAAGTTCTGC
GCAAGCTTTCTAGACCAT

BO09014.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6144-RC 687 CG6144-PC 1..684 17..700 3420 100 Plus
CG6144-RB 687 CG6144-PB 1..684 17..700 3420 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:07:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG6144-RC 1553 CG6144-RC 113..797 16..700 3425 100 Plus
CG6144-RB 1705 CG6144-RB 265..949 16..700 3425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10489050..10489705 45..700 3280 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:07:08 has no hits.

BO09014.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:04:20 Download gff for BO09014.complete
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 1..687 17..701 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:23:27 Download gff for BO09014.complete
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 214..904 16..708 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:45:51 Download gff for BO09014.complete
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 266..949 17..702 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:04:20 Download gff for BO09014.complete
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 214..904 16..708 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:44 Download gff for BO09014.complete
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 266..949 17..702 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:44 Download gff for BO09014.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10488959..10488988 17..46 100 -> Plus
2L 10489052..10489705 47..702 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:45:51 Download gff for BO09014.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10488959..10488988 17..46 100 -> Plus
arm_2L 10489052..10489705 47..702 99   Plus

BO09014.pep Sequence

Translation from 16 to 718

> BO09014.pep
MDFTGFEVRKCPPTVMYIPNFITSEEEQRILSHIERTPKPRWTQLLNRRL
VNYGGVPHPNGMIAEEIPEWLQTYVDKVNNLGVFESQNANHVLVNEYLPG
QGILPHTDGPLFHPIISTISTGAHTVLEFVKREDTTTETEAGDQTTREVL
FKLLLEPRSLLILKDTLYTDYLHAISETSEDVLCDRISNYDLCENTYKIG
DHLVRRSPRISLTIRNVPKTSKMKLKFCASFLDH

BO09014.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG6144-PC 228 CG6144-PC 1..228 1..228 1207 100 Plus
CG6144-PB 228 CG6144-PB 1..228 1..228 1207 100 Plus