Clone BO09067 Report

Search the DGRC for BO09067

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:90
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG14005-RA
Protein status:BO09067.pep: validated full length
Sequenced Size:985

Clone Sequence Records

BO09067.3prime Sequence

948 bp (844 high quality bases) assembled on 2006-01-10

> BO09067.3prime
ATGGTCTAGAAAGCTTGCTGGTTCCAGCTTGATGGTCGTTTGCTTTATTA
ACGCCAGCACTGCCTCCTGCCGCTCCATATACGCCAGAAAGTTATGTTTC
ATGTCCAGGAACTGCTTCTCCTTGCGCACGAGCGACTGCAGACAGGCGTC
GTTCTGCTGCTCGAGCAAACTGTTCTCCTTGCGCAGCGCCTCCACTATTG
CCATTGTGATCTTGCCCGAGTGCGGCAGTATACTACGTCGCCCTCGTCTC
CTTTTGCTCGCCGAACGTTCGGCGTCCGTCTGGCCACCGTTGGTGTGGCC
TCCATATGGCGCATCCTCTGCCTCGGGCAGGATGTGGTTGGCAGGCGTGA
GAGGCGACCGCTGAATGACACTTTCGGCAGTAGCTCTCTCCAGGTAGTGG
CTAGCCGCGTTTTCCAGCTGCGTCACTGTGGGCTTGTATTCAATATTCAC
CAGCTGGTGGTGTTCGTCTGGCAGAGGCTCTGTCTTCACTACTGCGGGAA
CTAGGGGCTGGGCATCGAGGAAGGTGCATCCCTCTGAGTCGCGCTCAAAT
TTTAGCTGGGCGGGCGAAGTGTATAGCAGTGGCGGCAGGGCGGGCAAATC
CACACGTGCTGTCGCACGGATCGTCTCCAGCACATTGCGGAAATGGAAGA
GGGCGGACGACGGCCAGGCAGGACAGAAGAGGCAATCGATCAGCGCGTAG
AGACGCCAATCCTTCGCGAAGTTCGCATTGCCCCCCACGCGATTGCGATC
GTTCAAATACTTGTTGCGGTAGCTGTTGATGCGCCGGCGAGCCTCCTGCT
TATTGAGCCGAACTCCGTTCTGCTGCANGCCGTGCGCGATTTCCCGGAAA
ATGGGCAGGTTGTCCGTGTAGGAGGGTATGGCATGCAGGTGCTCGCGCCA
CAGCCGCAGTAGCATGGCCTCCTCCAGCGACGTGTAGTAGCGCAATCG

BO09067.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14005-PA 954 CG14005-RA 22..951 948..19 4631 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14005-RA 1396 CG14005-RA 111..1040 948..19 4639 99.9 Minus
CG14005-RB 1297 CG14005-RB 111..1034 948..19 4539 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5800873..5801608 19..754 3680 100 Plus
2L 23513712 2L 5801671..5801865 754..948 964 99.5 Plus
Blast to na_te.dros performed on 2015-02-06 10:41:46 has no hits.

BO09067.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:00:56 Download gff for BO09067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14005-PA 22..954 16..948 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:00:55 Download gff for BO09067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14005-PA 22..954 16..948 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:29:37 Download gff for BO09067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14005-RA 111..1040 19..948 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:39:33 Download gff for BO09067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14005-RA 111..1040 19..948 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:39:33 Download gff for BO09067.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 5801672..5801865 755..948 99   Plus
2L 5800871..5801608 19..754 99 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:29:37 Download gff for BO09067.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5801672..5801865 755..948 99   Plus
arm_2L 5800871..5801608 19..754 99 <- Plus

BO09067.5prime Sequence

935 bp (859 high quality bases) assembled on 2006-01-10

> BO09067.5prime
GAAGTTATCAGTCGACATGAGCGGCCAGAAGCACCTGCGATTGCGCTACT
ACACGTCGCTGGAGGAGGCCATGCTACTGCGGCTGTGGCGCGAGCACCTG
CATGCCATACCCTCCTACACGGACAACCTGCCCATTTTCCGGGAAATCGC
GCACGGCCTGCAGCAGAACGGAGTTCGGCTCAATAAGCAGGAGGCTCGCC
GGCGCATCAACAGCTACCGCAACAAGTATTTGAACGATCGCAATCGCGTG
GGGGGCAATGCGAACTTCGCGAAGGATTGGCGTCTCTACGCGCTGATCGA
TTGCCTCTTCTGTCCTGCCTGGCCGTCGTCCGCCCTCTTCCATTTCCGCA
ATGTGCTGGAGACGATCCGTGCGACAGCACGTGTGGATTTGCCCGCCCTG
CCGCCACTGCTATACACTTCGCCCGCCCAGCTAAAATTTGAGCGCGACTC
AGAGGGATGCACCTTCCTCGATGCCCAGCCCCTAGTTCCCGCAGTAGTGA
AGACAGAGCCTCTGCCAGACGAACACCACCAGCTGGTGAATATTGAATAC
AAGCCCACAGTGACGCAGCTGGAAAACGCGGCTAGCCACTACCTGGAGAG
AGCTACTGCCGAAAGTGTCATTCAGCGGTCGCCTCTCACGCCTGCCAACC
ACATCCTGCCCGAGGCAGAGGATGCGCCATATGGAGGCCACACCAACGGT
GGCCAGACGGACGCCGAACGTTCGGCGAGCAAAAGGAGACGAGGGCGACG
TAGTATACTGCCGCACTCGGGCAAGATCACAATGGCAATAGTGGAGGCGC
TGCGCAAGGAGAACAGTTTGCTCGAGCAGCAGAACGACGCCTGTCTGCAG
TCGCTCGTGCGCAAGGAGAAGCAGTTCCTGGACATGAAACATAACTTTCT
GGCGTATATGGAGCGGCAGGAGGCAGTGCTGGCGT

BO09067.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14005-PA 954 CG14005-RA 1..919 17..935 4595 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14005-RA 1396 CG14005-RA 90..1008 17..935 4595 100 Plus
CG14005-RB 1297 CG14005-RB 90..1002 17..935 4495 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:59:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5800905..5801608 935..232 3520 100 Minus
2L 23513712 2L 5801671..5801886 232..17 1080 100 Minus
Blast to na_te.dros performed on 2015-02-10 19:59:07 has no hits.

BO09067.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:00:57 Download gff for BO09067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14005-PA 1..919 17..935 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:00:57 Download gff for BO09067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14005-PA 1..919 17..935 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:26:32 Download gff for BO09067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14005-RA 90..1008 17..935 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:34:54 Download gff for BO09067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14005-RA 90..1008 17..935 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:34:54 Download gff for BO09067.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5800905..5801608 232..935 100 <- Minus
2L 5801672..5801886 17..231 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:26:32 Download gff for BO09067.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5800905..5801608 232..935 100 <- Minus
arm_2L 5801672..5801886 17..231 100   Minus

BO09067.complete Sequence

985 bp (985 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ631377

> BO09067.complete
GAAGTTATCAGTCGACATGAGCGGCCAGAAGCACCTGCGATTGCGCTACT
ACACGTCGCTGGAGGAGGCCATGCTACTGCGGCTGTGGCGCGAGCACCTG
CATGCCATACCCTCCTACACGGACAACCTGCCCATTTTCCGGGAAATCGC
GCACGGCCTGCAGCAGAACGGAGTTCGGCTCAATAAGCAGGAGGCTCGCC
GGCGCATCAACAGCTACCGCAACAAGTATTTGAACGATCGCAATCGCGTG
GGGGGCAATGCGAACTTCGCGAAGGATTGGCGTCTCTACGCGCTGATCGA
TTGCCTCTTCTGTCCTGCCTGGCCGTCGTCCGCCCTCTTCCATTTCCGCA
ATGTGCTGGAGACGATCCGTGCGACAGCACGTGTGGATTTGCCCGCCCTG
CCGCCACTGCTATACACTTCGCCCGCCCAGCTAAAATTTGAGCGCGACTC
AGAGGGATGCACCTTCCTCGATGCCCAGCCCCTAGTTCCCGCAGTAGTGA
AGACAGAGCCTCTGCCAGACGAACACCACCAGCTGGTGAATATTGAATAC
AAGCCCACAGTGACGCAGCTGGAAAACGCGGCTAGCCACTACCTGGAGAG
AGCTACTGCCGAAAGTGTCATTCAGCGGTCGCCTCTCACGCCTGCCAACC
ACATCCTGCCCGAGGCAGAGGATGCGCCATATGGAGGCCACACCAACGGT
GGCCAGACGGACGCCGAACGTTCGGCGAGCAAAAGGAGACGAGGGCGACG
TAGTATACTGCCGCACTCGGGCAAGATCACAATGGCAATAGTGGAGGCGC
TGCGCAAGGAGAACAGTTTGCTCGAGCAGCAGAACGACGCCTGTCTGCAG
TCGCTCGTGCGCAAGGAGAAGCAGTTCCTGGACATGAAACATAACTTTCT
GGCGTATATGGAGCGGCAGGAGGCAGTGCTGGCGTTAATAAAGCAAACGA
CCATCAAGCTGGAACCAGCAAGCTTTCTAGACCAT

BO09067.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14005-RA 954 CG14005-PA 1..951 17..967 4755 100 Plus
CG14005-RB 948 CG14005-PB 1..945 17..967 4630 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14005-RA 1396 CG14005-RA 90..1040 17..967 4755 100 Plus
CG14005-RB 1297 CG14005-RB 90..1034 17..967 4630 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:15:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5800873..5801608 967..232 3680 100 Minus
2L 23513712 2L 5801671..5801886 232..17 1080 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:15:53 has no hits.

BO09067.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:08:39 Download gff for BO09067.complete
Subject Subject Range Query Range Percent Splice Strand
CG14005-RA 1..954 17..970 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:28:30 Download gff for BO09067.complete
Subject Subject Range Query Range Percent Splice Strand
CG14005-RA 84..1034 17..967 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:49:21 Download gff for BO09067.complete
Subject Subject Range Query Range Percent Splice Strand
CG14005-RA 90..1040 17..969 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:08:39 Download gff for BO09067.complete
Subject Subject Range Query Range Percent Splice Strand
CG14005-RA 84..1034 17..967 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:14:25 Download gff for BO09067.complete
Subject Subject Range Query Range Percent Splice Strand
CG14005-RA 90..1040 17..969 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:14:25 Download gff for BO09067.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5800870..5801608 232..969 99 <- Minus
2L 5801672..5801886 17..231 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:49:21 Download gff for BO09067.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5800870..5801608 232..969 99 <- Minus
arm_2L 5801672..5801886 17..231 100   Minus

BO09067.pep Sequence

Translation from 16 to 985

> BO09067.pep
MSGQKHLRLRYYTSLEEAMLLRLWREHLHAIPSYTDNLPIFREIAHGLQQ
NGVRLNKQEARRRINSYRNKYLNDRNRVGGNANFAKDWRLYALIDCLFCP
AWPSSALFHFRNVLETIRATARVDLPALPPLLYTSPAQLKFERDSEGCTF
LDAQPLVPAVVKTEPLPDEHHQLVNIEYKPTVTQLENAASHYLERATAES
VIQRSPLTPANHILPEAEDAPYGGHTNGGQTDAERSASKRRRGRRSILPH
SGKITMAIVEALRKENSLLEQQNDACLQSLVRKEKQFLDMKHNFLAYMER
QEAVLALIKQTTIKLEPASFLDH

BO09067.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14005-PA 317 CG14005-PA 1..317 1..317 1651 100 Plus
CG14005-PB 315 CG14005-PB 1..315 1..317 1627 99.4 Plus