Clone BO09145 Report

Search the DGRC for BO09145

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:91
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG7544-RA
Protein status:BO09145.pep: validated full length
Sequenced Size:949

Clone Sequence Records

BO09145.3prime Sequence

939 bp (759 high quality bases) assembled on 2006-01-11

> BO09145.3prime
ATGGTCTAGAAAGCTTGCTGTTGTCCCCTGCTGTAGTGGCTCCGAGTGGA
AGCTCCAGGCCACCGCCCACCGAGTCGTGTGTCCCTGATGGAATTCAGTG
GTGCTGACATTCGCCACCTGCAGCTCCTTGAGGTAATCCAGTATTCTTGG
AACGTTGGCCTTGACGCCCAGCATCGTGGTGAAGATTCGCACACGCTCCT
TGTTCTCCAGACTCTCGTCTATAATGCGTTGCACAAACTGTACCTCGCCA
CCCACGCAGGTGAGTTCCTCCTGGCTTCCAGTTCTGGCATTATTGGGTGC
TGGTCGTCTCTCTGGATTCCTGGTATTGCCGCCTAAGGGATTTGGTAAGT
TCGAGTCGAAGAAGGGTGGATTGCACAGGCAAAATTGATACTGCAACTGT
TGCTGATCCTGCTCAAAATAGCTCTTAAAGATGTTCGTGTTGTCTGGTTG
AGCATAGACTTCTATAAGGCTTTCCATGTGATTTCTCTTTACATTCTCCT
TGGCGTATTCTATGTTTTGCGGTTTCGATTCCAAAGCCAACATGTGCCAA
CCATTTTTCTTGGCCCCAAGGAGTGAATAAATGCAGGAGGAGCCGCAGCC
TATATCTATACCACGTATGTTCTGCAAATTTAGAGGTTCCATTAGATCCT
CCAACCACAAAATGTAATTCAAACGTAGTGCTAATGTGGGCACCAAACTT
CCGGGTGCAAAATCCACATCTAAATCGTAATATTCCTTCAACAGCATTTT
GGTCAACTCACGAAGGGTCTTTTCATTGCGAAAGTTCACAGAAACCTTGC
CATTGAGCTCCAACTGGCACTGCTGCCGAAAATCTTTGTATTTTATAGCC
ATTTTGGTATAGTCGGGCTGCGTGCGTAACACATTACGTGGATGCATGCC
GACTATCTTTTGGTTCCCTTAGTTTTTACATGTCGACTG

BO09145.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG7544-PA 918 CG7544-RA 19..915 915..19 4485 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:07:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG7544-RB 1592 CG7544-RB 110..1021 929..19 4535 99.9 Minus
CG7544-RA 1585 CG7544-RA 110..1021 929..19 4535 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:07:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15148410..15148823 601..188 2070 100 Minus
2R 25286936 2R 15148149..15148361 811..599 1065 100 Minus
2R 25286936 2R 15148883..15149052 188..19 850 100 Minus
2R 25286936 2R 15147969..15148089 929..810 555 99.2 Minus
Blast to na_te.dros performed on 2015-02-10 19:07:31 has no hits.

BO09145.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:03:09 Download gff for BO09145.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7544-PA 1..918 15..931 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:03:59 Download gff for BO09145.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7544-PA 1..918 15..931 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 18:57:27 Download gff for BO09145.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7544-RA 110..1028 11..929 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:27:39 Download gff for BO09145.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7544-RA 110..1028 11..929 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:27:39 Download gff for BO09145.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 15147969..15148088 811..929 99 -> Minus
2R 15148150..15148360 600..810 100 -> Minus
2R 15148412..15148823 188..599 100 -> Minus
2R 15148884..15149059 11..187 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 18:57:27 Download gff for BO09145.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11035474..11035593 811..929 99 -> Minus
arm_2R 11035655..11035865 600..810 100 -> Minus
arm_2R 11035917..11036328 188..599 100 -> Minus
arm_2R 11036389..11036564 11..187 97   Minus

BO09145.5prime Sequence

892 bp (862 high quality bases) assembled on 2006-01-10

> BO09145.5prime
GAAGTTATCAGTCGACATGGTAAAAACTAAGGGAAACCAAAAGATAGTCG
GCATGCATCCACGTAATGTGTTACGCACGCAGCCCGACTATACCAAAATG
GCTATAAAATACAAAGATTTTCGGCAGCAGTGCCAGTTGGAGCTCAATGG
CAAGGTTTCTGTGAACTTTCGCAATGAAAAGACCCTTCGTGAGTTGACCA
AAATGCTGTTGAAGGAATATTACGATTTAGATGTGGATTTTGCACCCGGA
AGTTTGGTGCCCACATTAGCACTACGTTTGAATTACATTTTGTGGTTGGA
GGATCTAATGGAACCTCTAAATTTGCAGAACATACGTGGTATAGATATAG
GCTGCGGCTCCTCCTGCATTTATTCACTCCTTGGGGCCAAGAAAAATGGT
TGGCACATGTTGGCTTTGGAATCGAAACCGCAAAACATAGAATACGCCAA
GGAGAATGTAAAGAGAAATCACATGGAAAGCCTTATAGAAGTCTATGCTC
AACCAGACAACACGAACATCTTTAAGAGCTATTTTGAGCAGGATCAGCAA
CAGTTGCAGTATCAATTTTGCCTGTGCAATCCACCCTTCTTCGACTCGAA
CTTACCAAATCCCTTAGGCGGCAATACCAGGAATCCAGAGAGACGACCAG
CACCCAATAATGCCAGAACTGGAAGCCAGGAGGAACTCACCTGCGTGGGT
GGCGAGGTACAGTTTGTGCAACGCATTATAGACGAGAGTCTGGAGAACAA
GGAGCGTGTGCGAATCTTCACCACGATGCTGGGCGTCAAGGCCAACGTTC
CAAGAATACTGGATTACCTCAAGGAGCTGCAGGTGGCGAATGTCAGCACC
ACTGAATTCCATCANGGACACACGACTCGGTGGGCGGTGGCC

BO09145.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:36:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG7544-PA 918 CG7544-RA 1..876 17..892 4361 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG7544-RB 1592 CG7544-RB 107..982 17..892 4369 99.9 Plus
CG7544-RA 1585 CG7544-RA 107..982 17..892 4369 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:15:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15148410..15148823 349..762 2070 100 Plus
2R 25286936 2R 15148149..15148361 139..351 1065 100 Plus
2R 25286936 2R 15148883..15149013 762..892 644 99.2 Plus
2R 25286936 2R 15147966..15148089 17..140 620 100 Plus
Blast to na_te.dros performed on 2015-02-04 01:15:29 has no hits.

BO09145.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:03:10 Download gff for BO09145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7544-PA 1..876 17..892 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:04:00 Download gff for BO09145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7544-PA 1..876 17..892 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 04:39:10 Download gff for BO09145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7544-RA 107..982 17..892 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:28:12 Download gff for BO09145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7544-RA 107..982 17..892 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:28:12 Download gff for BO09145.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 15147966..15148088 17..139 100 -> Plus
2R 15148150..15148360 140..350 100 -> Plus
2R 15148412..15148823 351..762 100 -> Plus
2R 15148884..15149013 763..892 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 04:39:10 Download gff for BO09145.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11035471..11035593 17..139 100 -> Plus
arm_2R 11035655..11035865 140..350 100 -> Plus
arm_2R 11035917..11036328 351..762 100 -> Plus
arm_2R 11036389..11036518 763..892 99   Plus

BO09145.complete Sequence

949 bp (949 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ631410

> BO09145.complete
GAAGTTATCAGTCGACATGGTAAAAACTAAGGGAAACCAAAAGATAGTCG
GCATGCATCCACGTAATGTGTTACGCACGCAGCCCGACTATACCAAAATG
GCTATAAAATACAAAGATTTTCGGCAGCAGTGCCAGTTGGAGCTCAATGG
CAAGGTTTCTGTGAACTTTCGCAATGAAAAGACCCTTCGTGAGTTGACCA
AAATGCTGTTGAAGGAATATTACGATTTAGATGTGGATTTTGCACCCGGA
AGTTTGGTGCCCACATTAGCACTACGTTTGAATTACATTTTGTGGTTGGA
GGATCTAATGGAACCTCTAAATTTGCAGAACATACGTGGTATAGATATAG
GCTGCGGCTCCTCCTGCATTTATTCACTCCTTGGGGCCAAGAAAAATGGT
TGGCACATGTTGGCTTTGGAATCGAAACCGCAAAACATAGAATACGCCAA
GGAGAATGTAAAGAGAAATCACATGGAAAGCCTTATAGAAGTCTATGCTC
AACCAGACAACACGAACATCTTTAAGAGCTATTTTGAGCAGGATCAGCAA
CAGTTGCAGTATCAATTTTGCCTGTGCAATCCACCCTTCTTCGACTCGAA
CTTACCAAATCCCTTAGGCGGCAATACCAGGAATCCAGAGAGACGACCAG
CACCCAATAATGCCAGAACTGGAAGCCAGGAGGAACTCACCTGCGTGGGT
GGCGAGGTACAGTTTGTGCAACGCATTATAGACGAGAGTCTGGAGAACAA
GGAGCGTGTGCGAATCTTCACCACGATGCTGGGCGTCAAGGCCAACGTTC
CAAGAATACTGGATTACCTCAAGGAGCTGCAGGTGGCGAATGTCAGCACC
ACTGAATTCCATCAGGGACACACGACTCGGTGGGCGGTGGCCTGGAGCTT
CCACTCGGAGCCACTACAGCAGGGGACAACAGCAAGCTTTCTAGACCAT

BO09145.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:35:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG7544-RB 918 CG7544-PB 1..915 17..931 4575 100 Plus
CG7544-RA 918 CG7544-PA 1..915 17..931 4575 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:35:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7544-RB 1592 CG7544-RB 107..1021 17..931 4575 100 Plus
CG7544-RA 1585 CG7544-RA 107..1021 17..931 4575 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15148410..15148823 349..762 2070 100 Plus
2R 25286936 2R 15148149..15148361 139..351 1065 100 Plus
2R 25286936 2R 15148883..15149052 762..931 850 100 Plus
2R 25286936 2R 15147966..15148089 17..140 620 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:35:17 has no hits.

BO09145.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:07:53 Download gff for BO09145.complete
Subject Subject Range Query Range Percent Splice Strand
CG7544-RA 1..918 17..935 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:27:47 Download gff for BO09145.complete
Subject Subject Range Query Range Percent Splice Strand
CG7544-RB 90..1011 17..939 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:32:40 Download gff for BO09145.complete
Subject Subject Range Query Range Percent Splice Strand
CG7544-RA 107..1021 17..933 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:07:54 Download gff for BO09145.complete
Subject Subject Range Query Range Percent Splice Strand
CG7544-RA 90..1011 17..939 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:58 Download gff for BO09145.complete
Subject Subject Range Query Range Percent Splice Strand
CG7544-RA 107..1021 17..933 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:58 Download gff for BO09145.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15148412..15148823 351..762 100 -> Plus
2R 15148884..15149052 763..933 98   Plus
2R 15148150..15148360 140..350 100 -> Plus
2R 15147966..15148088 17..139 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:32:40 Download gff for BO09145.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11035471..11035593 17..139 100 -> Plus
arm_2R 11035655..11035865 140..350 100 -> Plus
arm_2R 11035917..11036328 351..762 100 -> Plus
arm_2R 11036389..11036557 763..933 98   Plus

BO09145.pep Sequence

Translation from 16 to 949

> BO09145.pep
MVKTKGNQKIVGMHPRNVLRTQPDYTKMAIKYKDFRQQCQLELNGKVSVN
FRNEKTLRELTKMLLKEYYDLDVDFAPGSLVPTLALRLNYILWLEDLMEP
LNLQNIRGIDIGCGSSCIYSLLGAKKNGWHMLALESKPQNIEYAKENVKR
NHMESLIEVYAQPDNTNIFKSYFEQDQQQLQYQFCLCNPPFFDSNLPNPL
GGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDESLENKERVRI
FTTMLGVKANVPRILDYLKELQVANVSTTEFHQGHTTRWAVAWSFHSEPL
QQGTTASFLDH

BO09145.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG7544-PB 305 CG7544-PB 1..305 1..305 1618 100 Plus
CG7544-PA 305 CG7544-PA 1..305 1..305 1618 100 Plus