Clone BO09155 Report

Search the DGRC for BO09155

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:91
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG7979-RA
Protein status:BO09155.pep: validated full length
Sequenced Size:1357

Clone Sequence Records

BO09155.3prime Sequence

887 bp (808 high quality bases) assembled on 2006-01-11

> BO09155.3prime
ATGGTCTAGAAAGCTTGCCGGTGTATGTGTATCAAAGTACTTGTTGGAGC
TTTCCTGAAAGCGATCGCTACGCGCCAATTCGTTGCGGAAGTAGGAGATG
GTCCGCTGAAGTCCAGTCTCTAGGGGAACCTTTGGCTCCCAATGGAGCAA
CTGGCGGGCTCGAGTTATGTCCGGTTTTCTGCGCTGCGGATCATCTTCCA
TGGCCTTCGATTGCTTTATCACACTGGGCCCGCCGACCAGTTTCTTGATG
ATCTCGGCAAATTCGCCGATTGTCTGCTCCACAGGATTGCCTAAATTCAC
CGGCTGTGTGTAGTTGGATGCCATTAGGGCTATCATTCCGTCCACCAGAT
CCGAAACATACTGAAAGGAGCGCGTTTGTTTGCCATTTCCATACACCGTA
ATGGTTTCATTCCTCAGCGCCTGAAGTATAAAGTTTGACACCACTCGTCC
ATCGTTCATATGCATTCTCGGTCCATAAGTGTTAAAGATGCGCGCCACTC
GGACTTGCACTTTCTCCTGTTTGGCATACGCATAGCTCAGCGTCTCGGAG
ACACGCTTTCCCTCGTCATAACAGGCTCTCGGTCCAATAGGGTTTACATG
TCCCCAGTATGTTTCTGGCTGCGGATGCACTGTGGGATCGCCGTACACTT
CCGAAGTGCTAGCTATCAAAACCTTGGCCATCACGCGCTTGGCCAGACCC
AGTACATTGATCGTGCCCATGGTGTTGGTCTTGATGGTCTTCACCGGATT
GTACATGTAATGCGGTGGCGAGGCTGGCGATGCCAAGTGGTAGATCTCAT
CGATCTCGATGAAAAGCGGATTCACTATGTCGTGGTGGATGAGCTCGAAG
TTCTCGTGCCCCAGCCAGTGCTCGACATTTCGCTTGC

BO09155.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:36:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG7979-PA 1326 CG7979-RA 455..1323 887..19 4345 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:10:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG7979-RA 2093 CG7979-RA 573..1441 887..19 4345 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8182216..8182717 520..19 2510 100 Minus
3L 28110227 3L 8181495..8181685 887..697 955 100 Minus
3L 28110227 3L 8181750..8181933 699..516 920 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:10:15 has no hits.

BO09155.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:03:24 Download gff for BO09155.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-PA 455..1326 18..887 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:04:20 Download gff for BO09155.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-PA 455..1326 18..887 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:20:13 Download gff for BO09155.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 573..1441 19..887 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:28:43 Download gff for BO09155.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 573..1441 19..887 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:28:43 Download gff for BO09155.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 8181495..8181683 699..887 100 -> Minus
3L 8181751..8181932 517..698 100 -> Minus
3L 8182220..8182717 19..516 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:20:13 Download gff for BO09155.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8174595..8174783 699..887 100 -> Minus
arm_3L 8174851..8175032 517..698 100 -> Minus
arm_3L 8175320..8175817 19..516 100   Minus

BO09155.5prime Sequence

917 bp (907 high quality bases) assembled on 2006-01-10

> BO09155.5prime
GAAGTTATCAGTCGACATGACTGCCACCAAAAAGCGTCTGAAGATCGTTG
CAGCCATCTCGCTGCTCCTCCTGCTCCTGGTCTACCTTTACCGAATGGCC
AGCTTCTGCCCAAGCGGAAAGGTCGCCGTTTCCGTTCCCGGCGTCGAGGA
GGTTCAGGCCAAATGGCCGCCCACGGAAAGTCCGCTACAAAGGAGCCTTC
AGATGGCGTACGAGGAGCAGAGCTCTCTTATTCGAGAACAAAAGGCCGAA
CTCCAGCGCACAAGGGAGAATTTGGCCAGATTGGAGGAACAAGTTCGTAG
CCTCCAGACCAGCACACCGCGCAAGTATCCGAAGGTTAAATACCTGAACT
ATAAGAATCGCAAACGCATACTAATTACCGGAGGAGCTGGCTTCGTGGGC
TCCCACTTGGTCGACGATCTGATGGTCCAGGGGCACGAGGTCATCGTGGT
GGACAATTTCTTTACGGGACGCAAGCGAAATGTCGAGCACTGGCTGGGGC
ACGAGAACTTCGAGCTCATCCACCACGACATAGTGAATCCGCTTTTCATC
GAGATCGATGAGATCTACCACTTGGCATCGCCAGCCTCGCCACCGCATTA
CATGTACAATCCGGTGAAGACCATCAAGACCAACACCATGGGCACGATCA
ATGTACTGGGTCTGGCCAAGCGCGTGATGGCCAAGGTTTTGATAGCTAGC
ACTTCGGAAGTGTACGGCGATCCCACAGTGCATCCGCAGCCAGAAACATA
CTGGGGACATGTAAACCCTATTGGACCGAGAGCCTGTTATGACGAGGGAA
AGCGTGTCTCCGAGACGCTGAGCTATGCGTATGCCAAACAGGAGAAAGTG
CAAGTCCGAGTGGCGCGCATCTTTACACTTATGGACCGAGAATGCATATG
AACGATGGACGAGTGGT

BO09155.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:36:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7979-PA 1326 CG7979-RA 1..859 17..875 4295 100 Plus
CG7979-PA 1326 CG7979-RA 860..902 875..917 215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 02:45:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG7979-RA 2093 CG7979-RA 119..1020 17..917 4485 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 02:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8181041..8181685 17..661 3225 100 Plus
3L 28110227 3L 8181750..8181933 659..842 920 100 Plus
3L 28110227 3L 8182216..8182296 838..917 355 98.8 Plus
Blast to na_te.dros performed on 2015-02-10 02:45:37 has no hits.

BO09155.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:03:25 Download gff for BO09155.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-PA 1..902 17..917 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:04:21 Download gff for BO09155.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-PA 1..902 17..917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:40:21 Download gff for BO09155.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 109..1020 7..917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:10:47 Download gff for BO09155.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 109..1020 7..917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:10:47 Download gff for BO09155.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8181031..8181683 7..659 99 -> Plus
3L 8181751..8181932 660..841 100 -> Plus
3L 8182220..8182296 842..917 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:40:21 Download gff for BO09155.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8174131..8174783 7..659 99 -> Plus
arm_3L 8174851..8175032 660..841 100 -> Plus
arm_3L 8175320..8175396 842..917 98   Plus

BO09155.complete Sequence

1357 bp (1357 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ631415

> BO09155.complete
GAAGTTATCAGTCGACATGACTGCCACCAAAAAGCGTCTGAAGATCGTTG
CAGCCATCTCGCTGCTCCTCCTGCTCCTGGTCTACCTTTACCGAATGGCC
AGCTTCTGCCCAAGCGGAAAGGTCGCCGTTTCCGTTCCCGGCGTCGAGGA
GGTTCAGGCCAAATGGCCGCCCACGGAAAGTCCGCTACAAAGGAGCCTTC
AGATGGCGTACGAGGAGCAGAGCTCTCTTATTCGAGAACAAAAGGCCGAA
CTCCAGCGCACAAGGGAGAATTTGGCCAGATTGGAGGAACAAGTTCGTAG
CCTCCAGACCAGCACACCGCGCAAGTATCCGAAGGTTAAATACCTGAACT
ATAAGAATCGCAAACGCATACTAATTACCGGAGGAGCTGGCTTCGTGGGC
TCCCACTTGGTCGACGATCTGATGGTCCAGGGGCACGAGGTCATCGTGGT
GGACAATTTCTTTACGGGACGCAAGCGAAATGTCGAGCACTGGCTGGGGC
ACGAGAACTTCGAGCTCATCCACCACGACATAGTGAATCCGCTTTTCATC
GAGATCGATGAGATCTACCACTTGGCATCGCCAGCCTCGCCACCGCATTA
CATGTACAATCCGGTGAAGACCATCAAGACCAACACCATGGGCACGATCA
ATGTACTGGGTCTGGCCAAGCGCGTGATGGCCAAGGTTTTGATAGCTAGC
ACTTCGGAAGTGTACGGCGATCCCACAGTGCATCCGCAGCCAGAAACATA
CTGGGGACATGTAAACCCTATTGGACCGAGAGCCTGTTATGACGAGGGAA
AGCGTGTCTCCGAGACGCTGAGCTATGCGTATGCCAAACAGGAGAAAGTG
CAAGTCCGAGTGGCGCGCATCTTTAACACTTATGGACCGAGAATGCATAT
GAACGATGGACGAGTGGTGTCAAACTTTATACTTCAGGCGCTGAGGAATG
AAACCATTACGGTGTATGGAAATGGCAAACAAACGCGCTCCTTTCAGTAT
GTTTCGGATCTGGTGGACGGAATGATAGCCCTAATGGCATCCAACTACAC
ACAGCCGGTGAATTTAGGCAATCCTGTGGAGCAGACAATCGGCGAATTTG
CCGAGATCATCAAGAAACTGGTCGGCGGGCCCAGTGTGATAAAGCAATCG
AAGGCCATGGAAGATGATCCGCAGCGCAGAAAACCGGACATAACTCGAGC
CCGCCAGTTGCTCCATTGGGAGCCAAAGGTTCCCCTAGAGACTGGACTTC
AGCGGACCATCTCCTACTTCCGCAACGAATTGGCGCGTAGCGATCGCTTT
CAGGAAAGCTCCAACAAGTACTTTGATACACATACACCGGCAAGCTTTCT
AGACCAT

BO09155.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:50:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG7979-RA 1326 CG7979-PA 1..1323 17..1339 6615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:50:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG7979-RA 2093 CG7979-RA 119..1441 17..1339 6615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8181041..8181685 17..661 3225 100 Plus
3L 28110227 3L 8182216..8182717 838..1339 2510 100 Plus
3L 28110227 3L 8181750..8181933 659..842 920 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:50:13 has no hits.

BO09155.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:08:07 Download gff for BO09155.complete
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 1..1326 17..1340 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:27:55 Download gff for BO09155.complete
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 109..1441 7..1339 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:12 Download gff for BO09155.complete
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 119..1441 17..1341 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:08:07 Download gff for BO09155.complete
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 109..1441 7..1339 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:57 Download gff for BO09155.complete
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 119..1441 17..1341 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:57 Download gff for BO09155.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8181041..8181683 17..659 100 -> Plus
3L 8181751..8181932 660..841 100 -> Plus
3L 8182220..8182717 842..1341 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:12 Download gff for BO09155.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8174141..8174783 17..659 100 -> Plus
arm_3L 8174851..8175032 660..841 100 -> Plus
arm_3L 8175320..8175817 842..1341 99   Plus

BO09155.pep Sequence

Translation from 16 to 1357

> BO09155.pep
MTATKKRLKIVAAISLLLLLLVYLYRMASFCPSGKVAVSVPGVEEVQAKW
PPTESPLQRSLQMAYEEQSSLIREQKAELQRTRENLARLEEQVRSLQTST
PRKYPKVKYLNYKNRKRILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFT
GRKRNVEHWLGHENFELIHHDIVNPLFIEIDEIYHLASPASPPHYMYNPV
KTIKTNTMGTINVLGLAKRVMAKVLIASTSEVYGDPTVHPQPETYWGHVN
PIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMNDGRV
VSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPVNL
GNPVEQTIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQLLH
WEPKVPLETGLQRTISYFRNELARSDRFQESSNKYFDTHTPASFLDH

BO09155.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:40:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7979-PA 441 CG7979-PA 1..441 1..441 2288 100 Plus