Clone BO09185 Report

Search the DGRC for BO09185

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:91
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptDsor1-RA
Protein status:BO09185.pep: validated full length
Sequenced Size:1222

Clone Sequence Records

BO09185.3prime Sequence

954 bp (750 high quality bases) assembled on 2006-01-11

> BO09185.3prime
ATGGTCTAGAAAGCTTGCGTTGGGCGACGTATTACGCTTTGGCGTCGATG
GCGGCAGGTCCATTGTCTTGCACACCCAGCCGGATATATCCACCTCCTCC
AATTCCGCCTTGCGTATCCACGGATGACTCAGCAGGGTCTTGAGATCTGC
CCGCTCGTCGGGCTGTTTCTTCAGGCAGATGTCCACGAAGTCCTTGAACT
CGGTGGAGAAGATCTTGTGCTCTAGCTTGGGCGGCGGTTCGTTTACAATA
TAATCCAGCAGCTCGAAGATGGCCATTGCCCTGGGCTCGTCCGTCGGCTG
GCCGCTCTCCTCCGCATTGTCGGCGAATATCGACTCCAGGGTGGCGGTGT
TTGGCGGCGGGATGGGGTACATGCCGATGGCCATCTCCACCAGCGACAGA
CCCAACGACCAGATGTCCGACTGCACGGAGTAGTGGGTGCCCTGCAATCG
CTCCGGCGACATATAGCTACGGGTGCCCACAAAGGAGTTGGCCATCGAGT
CGATCAGTTGACCGGAGACGCCGAAATCACAGATCTTGATCTCGCCGCTG
CTATTGACGAGGATATTGCTCGGCTTCACGTCACGGTGGATGATGGCGTG
ATTGTCGCGCAGATAGCTCAAGCCCTTGAGCACCGCCAGCGTGATCCTGC
CGAGAATGGACTCTGGTATTCGACCGGCCCGCTTGAGGATCAGGTCAAGT
GATCCACCGTCCATATACTCCATGCAGATACTGATCTCGCCGTCGCTGTA
GAAGGCGCCGTAGAAACCGACAATGTGCGGGAAATTACATTCGTGCAGGA
CTTTCAGTTCGCGCAAGATCTGTTTCTTGATCGCCGGCTTCACCTCCAGA
TGGATCAGTTTCCTGGGCATGATCAGGTGTGTGTGCGTGTGCCGGACCTT
CATCACCACGCCGCCATTGCCCGATCCGAGCTCGCCCAGCTTCTCCAGAT
CCTC

BO09185.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:37:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15793-PA 1191 Dsor1-RA 253..1188 954..19 4630 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 14:15:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsor1-RB 1503 CG15793-RB 414..1349 954..19 4650 99.8 Minus
Dsor1-RA 1799 CG15793-RA 710..1645 954..19 4650 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 14:15:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9248684..9249181 954..457 2460 99.6 Minus
X 23542271 X 9249374..9249701 457..130 1640 100 Minus
X 23542271 X 9249772..9249883 130..19 560 100 Minus
Blast to na_te.dros performed on 2015-02-08 14:15:34 has no hits.

BO09185.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:04:18 Download gff for BO09185.3prime
Subject Subject Range Query Range Percent Splice Strand
Dsor1-PA 253..1191 18..954 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:05:40 Download gff for BO09185.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15793-PA 253..1191 18..954 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:54:08 Download gff for BO09185.3prime
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 710..1645 19..954 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:35:02 Download gff for BO09185.3prime
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 710..1645 19..954 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 15:35:02 Download gff for BO09185.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9249375..9249701 130..456 100 -> Minus
X 9248684..9249181 457..954 99 -> Minus
X 9249773..9249883 19..129 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:54:08 Download gff for BO09185.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9142717..9143214 457..954 99 -> Minus
arm_X 9143408..9143734 130..456 100 -> Minus
arm_X 9143806..9143916 19..129 100   Minus

BO09185.5prime Sequence

866 bp (767 high quality bases) assembled on 2006-01-10

> BO09185.5prime
GAAGTTATCAGTCGACATGTCGAAGAACAAGCTGAATCTGGTGCTGCCGC
CGGTAAATACGGAGGCAACTGTTGCCGCCGCCACAGTGGCGCCGACGCCG
CCATTCAAAACCCCCTCGGGCACAGACACACACAGTTTGCTGGGGAAGCC
CAAGACGAGCATCGATGCGCTGACAGAGACGCTGGAGGGTCTGGACATGG
GCGACACGGAACGCAAGCGGATCAAGATGTTCCTCAGCCAGAAGGAGAAG
ATCGGCGAGCTGTCCGACGAGGATCTGGAGAAGCTGGGCGAGCTCGGATC
GGGCAATGGCGGCGTGGTGATGAAGGTCCGGCACACGCACACACACCTGA
TCATGGCCAGGAAACTGATCCATCTGGAGGTGAAGCCGGCGATCAAGAAA
CAGATCCTGCGCGAACTGAAAGTCCTGCACGAATGTAATTTCCCGCACAT
TGTCGGTTTCTACGGCGCCTTCTACAGCGACGGCGAGATCAGTATCTGCA
TGGAGTATATGGACGGTGGATCACTTGACCTGATCCTCAAGCGGGCCGGT
CGAATACCAGAGTCCATTCTCGGCAGGATCACGCTGGCGGTGCTCAAGGG
CTTGAGCTATCTGCGCGACAATCACGCCATCATCCACCGTGACGTGAAGC
CGAGCAATATCCTCGTCAATAGCAGCGGCGAGATCAAGATCTGTGATTTC
GGCGTCTCCGGTCAACTGATCGACTCGATGGCCAACTCCTTTGTGGGCAC
CCGTAGCTATATGTCGCCGGAGCGATTGCAGGGCACCCACTACTCCGTGC
AGTCGGACATCTGGTCGTTGGGTCTGTCGCTGGTGGAGATGGCCATCGGC
ATGTACCCCATCCCGC

BO09185.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15793-PA 1191 Dsor1-RA 1..850 17..866 4250 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:35:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsor1-RA 1799 CG15793-RA 458..1307 17..866 4250 100 Plus
Dsor1-RB 1503 CG15793-RB 171..1011 17..866 4105 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:35:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9248542..9249181 127..766 3200 100 Plus
X 23542271 X 9247799..9247908 17..126 550 100 Plus
X 23542271 X 9249374..9249474 766..866 505 100 Plus
Blast to na_te.dros performed on 2015-02-11 17:35:33 has no hits.

BO09185.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:04:19 Download gff for BO09185.5prime
Subject Subject Range Query Range Percent Splice Strand
Dsor1-PA 1..850 17..866 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:05:42 Download gff for BO09185.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15793-PA 1..850 17..866 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:15:43 Download gff for BO09185.5prime
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 449..1307 6..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:13:18 Download gff for BO09185.5prime
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 449..1307 6..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:13:18 Download gff for BO09185.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9247790..9247908 6..126 96 -> Plus
X 9248542..9249181 127..766 100 -> Plus
X 9249375..9249474 767..866 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:15:43 Download gff for BO09185.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9141823..9141941 6..126 96 -> Plus
arm_X 9142575..9143214 127..766 100 -> Plus
arm_X 9143408..9143507 767..866 100   Plus

BO09185.complete Sequence

1222 bp (1222 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ631423

> BO09185.complete
GAAGTTATCAGTCGACATGTCGAAGAACAAGCTGAATCTGGTGCTGCCGC
CGGTAAATACGGAGGCAACTGTTGCCGCCGCCACAGTGGCGCCGACGCCG
CCATTCAAAACCCCCTCGGGCACAGACACACACAGTTTGCTGGGGAAGCC
CAAGACGAGCATCGATGCGCTGACAGAGACGCTGGAGGGTCTGGACATGG
GCGACACGGAACGCAAGCGGATCAAGATGTTCCTCAGCCAGAAGGAGAAG
ATCGGCGAGCTGTCCGACGAGGATCTGGAGAAGCTGGGCGAGCTCGGATC
GGGCAATGGCGGCGTGGTGATGAAGGTCCGGCACACGCACACACACCTGA
TCATGGCCAGGAAACTGATCCATCTGGAGGTGAAGCCGGCGATCAAGAAA
CAGATCCTGCGCGAACTGAAAGTCCTGCACGAATGTAATTTCCCGCACAT
TGTCGGTTTCTACGGCGCCTTCTACAGCGACGGCGAGATCAGTATCTGCA
TGGAGTATATGGACGGTGGATCACTTGACCTGATCCTCAAGCGGGCCGGT
CGAATACCAGAGTCCATTCTCGGCAGGATCACGCTGGCGGTGCTCAAGGG
CTTGAGCTATCTGCGCGACAATCACGCCATCATCCACCGTGACGTGAAGC
CGAGCAATATCCTCGTCAATAGCAGCGGCGAGATCAAGATCTGTGATTTC
GGCGTCTCCGGTCAACTGATCGACTCGATGGCCAACTCCTTTGTGGGCAC
CCGTAGCTATATGTCGCCGGAGCGATTGCAGGGCACCCACTACTCCGTGC
AGTCGGACATCTGGTCGTTGGGTCTGTCGCTGGTGGAGATGGCCATCGGC
ATGTACCCCATCCCGCCGCCAAACACCGCCACCCTGGAGTCGATATTCGC
CGACAATGCGGAGGAGAGCGGCCAGCCGACGGACGAGCCCAGGGCAATGG
CCATCTTCGAGCTGCTGGATTATATTGTAAACGAACCGCCGCCCAAGCTA
GAGCACAAGATCTTCTCCACCGAGTTCAAGGACTTCGTGGACATCTGCCT
GAAGAAACAGCCCGACGAGCGGGCAGATCTCAAGACCCTGCTGAGTCATC
CGTGGATACGCAAGGCGGAATTGGAGGAGGTGGATATATCCGGCTGGGTG
TGCAAGACAATGGACCTGCCGCCATCGACGCCAAAGCGTAATACGTCGCC
CAACGCAAGCTTTCTAGACCAT

BO09185.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:24:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsor1-RA 1191 CG15793-PA 1..1188 17..1204 5940 100 Plus
Dsor1-RB 1182 CG15793-PB 1..1179 17..1204 5770 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsor1-RA 1799 CG15793-RA 458..1645 17..1204 5940 100 Plus
Dsor1-RB 1503 CG15793-RB 171..1349 17..1204 5770 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:24:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9248542..9249181 127..766 3200 100 Plus
X 23542271 X 9249374..9249701 766..1093 1640 100 Plus
X 23542271 X 9249772..9249883 1093..1204 560 100 Plus
X 23542271 X 9247799..9247908 17..126 550 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:24:01 has no hits.

BO09185.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:07:51 Download gff for BO09185.complete
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 1..1191 17..1205 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:27:45 Download gff for BO09185.complete
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 3..1192 15..1204 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:59 Download gff for BO09185.complete
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 458..1645 17..1206 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:07:51 Download gff for BO09185.complete
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 3..1192 15..1204 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:24:41 Download gff for BO09185.complete
Subject Subject Range Query Range Percent Splice Strand
Dsor1-RA 458..1645 17..1206 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:24:41 Download gff for BO09185.complete
Subject Subject Range Query Range Percent Splice Strand
X 9247799..9247908 17..126 100 -> Plus
X 9248542..9249181 127..766 100 -> Plus
X 9249375..9249701 767..1093 100 -> Plus
X 9249773..9249883 1094..1206 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:59 Download gff for BO09185.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9141832..9141941 17..126 100 -> Plus
arm_X 9142575..9143214 127..766 100 -> Plus
arm_X 9143408..9143734 767..1093 100 -> Plus
arm_X 9143806..9143916 1094..1206 98   Plus

BO09185.pep Sequence

Translation from 16 to 1222

> BO09185.pep
MSKNKLNLVLPPVNTEATVAAATVAPTPPFKTPSGTDTHSLLGKPKTSID
ALTETLEGLDMGDTERKRIKMFLSQKEKIGELSDEDLEKLGELGSGNGGV
VMKVRHTHTHLIMARKLIHLEVKPAIKKQILRELKVLHECNFPHIVGFYG
AFYSDGEISICMEYMDGGSLDLILKRAGRIPESILGRITLAVLKGLSYLR
DNHAIIHRDVKPSNILVNSSGEIKICDFGVSGQLIDSMANSFVGTRSYMS
PERLQGTHYSVQSDIWSLGLSLVEMAIGMYPIPPPNTATLESIFADNAEE
SGQPTDEPRAMAIFELLDYIVNEPPPKLEHKIFSTEFKDFVDICLKKQPD
ERADLKTLLSHPWIRKAELEEVDISGWVCKTMDLPPSTPKRNTSPNASFL
DH

BO09185.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:40:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsor1-PA 396 CG15793-PA 1..396 1..396 2054 100 Plus
Dsor1-PB 393 CG15793-PB 1..393 1..396 2023 99.2 Plus
lic-PA 334 CG12244-PA 40..332 81..389 526 37.3 Plus
Mkk4-PC 424 CG9738-PC 23..406 1..383 507 34.1 Plus
Mkk4-PB 424 CG9738-PB 23..406 1..383 507 34.1 Plus