Clone BO09207 Report

Search the DGRC for BO09207

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:92
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG5168-RA
Protein status:BO09207.pep: validated full length
Sequenced Size:1258

Clone Sequence Records

BO09207.3prime Sequence

944 bp (850 high quality bases) assembled on 2006-01-18

> BO09207.3prime
ATGGTCTAGAAAGCTTGCTGCCCAGATGTTGGAGAGATCCCAGATCTTGA
TGAGCCTGTCCTGGCCCACTGTCAACAGGCGCTTTCTGTCCTCGTCCAGG
TCCATGTAGACGATCGAATGCTTGGCGTCATTGAATGAAGCCAGCGAGGG
GCGCTCGACTGTCTGAAGTTGTTTGTAGCACGGATCACAGGTACGCACAT
CAAACTCGAAGCCCATTATGGGTATGTTAATGCGATTGGTGGAACAGTTG
TCGCACACGGCTTTGCCGCAGTGGCGACAATGATGCTGTCGTATTCCCAG
CTGCTTTTGATCCATCATTGAGCGGAAGTTCCAGAAGAAGGGCCTGGAGC
AAAGCTGACAGTTGTTGGTATCCACCCAGCCAGGAACCTCTTTCCGCATT
GCATTCATTTCCCAAAAAACCACTACTGAATCTTCGCCACAGCTTATCAG
TTGTTGCGTGTGATTCGCGTACGACAGGGCGGAAACTTTGTTGCTATGTC
CCTGCAGCTCGTAAATGGTGCCACGTTTGCCACCAACATCCCAAACTAGC
ACGGACTGATCGCAAGCTCCGCTAAACAAGAGCTGAGGGCCTTCCACCCA
TTTGAGGCACCGGATTTCCGCCGAATGTCCATTGAAAGTGGTAATTAGTT
GCACTCCCTGAACATCGCACCTTAGCATTGTTATCTGTCCAGCATGATCG
CCCACAAAGGCATACTTGGCCAAAGCGTCGAACTGGAGAGCCGTGCATGG
TGTCTCAAAGTTGTATCCGCCCACCCGTTTGCCGCTCTCCGTGCAATGAT
AGGCGAACTGCTTATCTTTGCCGGCGGAGAGTATCCACTTGTGGGTTTTC
GAGAAGACCACGGCCATGACCCGCGCTTGATGGGACAAGTAATCCCGCAG
GAAGGACAAGCGATTGCAGTCTTCGGATAGCGCGTACTGGGTGA

BO09207.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:37:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG5168-PA 1227 CG5168-RA 299..1224 944..19 4605 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5168-RB 1584 CG5168-RB 446..1371 944..19 4615 99.9 Minus
CG5168-RA 1623 CG5168-RA 485..1410 944..19 4615 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10424991..10425269 297..19 1395 100 Minus
2L 23513712 2L 10423888..10424100 944..732 1050 99.5 Minus
2L 23513712 2L 10424731..10424931 496..296 1005 100 Minus
2L 23513712 2L 10424543..10424670 621..494 640 100 Minus
2L 23513712 2L 10424371..10424483 733..621 565 100 Minus
Blast to na_te.dros performed on 2015-02-06 10:26:17 has no hits.

BO09207.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:04:43 Download gff for BO09207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5168-PA 300..1227 15..943 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:06:15 Download gff for BO09207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5168-PA 300..1227 15..943 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:27:42 Download gff for BO09207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5168-RA 486..1413 15..943 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:37:47 Download gff for BO09207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5168-RA 486..1413 15..943 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:37:47 Download gff for BO09207.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10424544..10424670 494..620 100 -> Minus
2L 10423889..10424098 734..943 99 -> Minus
2L 10424371..10424483 621..733 100 -> Minus
2L 10424734..10424930 297..493 100 -> Minus
2L 10424992..10425272 15..296 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:27:42 Download gff for BO09207.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10423889..10424098 734..943 99 -> Minus
arm_2L 10424371..10424483 621..733 100 -> Minus
arm_2L 10424544..10424670 494..620 100 -> Minus
arm_2L 10424734..10424930 297..493 100 -> Minus
arm_2L 10424992..10425272 15..296 99   Minus

BO09207.5prime Sequence

864 bp (824 high quality bases) assembled on 2006-01-17

> BO09207.5prime
GAAGTTATCAGTCGACATGGCTGCCGAGATAAAACCAGCTCAGCGGACCA
ACAATGATCGCTTTAACACCTCCAAAAAGCCGGAATTGCTGAGTAAGCTG
GAGGGCAGCAGCGACGATGTGAACGCAGCGATCCTAATTCCGGGCGAAAA
CGGCGTAATTAGCGTTTCCGATGACAAAACCGTTCGCGTTTGGCTAAAAC
GCGATTCTGGTCAATATTGGCCTAGCATTTGCCAGTATATGCCTTCCGGC
TGCACGGCCATCGAGTACGTTTCGGAATCCCGGCACCTGTACGTCGGCCA
GGAAAACGGAACGGTCACCCAGTACGCGCTATCCGAAGACTGCAATCGCC
TGTCCTTCCTGCGGGATTACTTGTCCCATCAAGCGCGGGTCATGGCCGTG
GTCTTCTCGAAAACCCACAAGTGGATACTCTCCGCCGGCAAAGATAAGCA
GTTCGCCTATCATTGCACGGAGAGCGGCAAACGGGTGGGCGGATACAACT
TTGAGACACCATGCACGGCTCTCCAGTTCGACGCTTTGGCCAAGTATGCC
TTTGTGGGCGATCATGCTGGACAGATAACAATGCTAAGGTGCGATGTTCA
GGGAGTGCAACTAATTACCACTTTCAATGGACATTCGGCGGAAATCCGGT
GCCTCAAATGGGTGGAAGGCCCTCAGCTCTTGTTTAGCGGAGCTTGCGAT
CAGTCCGTGCTAGTTTGGGATGTTGGTGGCAAACGTGGCACCATTTACGA
GCTGCAGGGACATAGCAACAAAGTTTCCGCCCTGTCGTACGCGAATCACA
CGCAACAACTGATAAGCTGTGGCGAAGATTCAGTAGTGGTTTTTTGGGGA
ATGAATGCAATGCG

BO09207.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:37:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG5168-PA 1227 CG5168-RA 1..848 17..864 4215 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:41:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG5168-RB 1584 CG5168-RB 148..995 17..864 4225 99.9 Plus
CG5168-RA 1623 CG5168-RA 187..1034 17..864 4225 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10423751..10424100 178..527 1750 100 Plus
2L 23513712 2L 10423520..10423680 17..177 805 100 Plus
2L 23513712 2L 10424543..10424670 638..765 640 100 Plus
2L 23513712 2L 10424371..10424483 526..638 565 100 Plus
2L 23513712 2L 10424731..10424832 763..864 495 99 Plus
Blast to na_te.dros performed on 2015-02-12 11:41:29 has no hits.

BO09207.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:04:44 Download gff for BO09207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5168-PA 1..848 17..864 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:06:16 Download gff for BO09207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5168-PA 1..848 17..864 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:26:52 Download gff for BO09207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5168-RA 187..1034 17..864 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:47:00 Download gff for BO09207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5168-RA 187..1034 17..864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:47:00 Download gff for BO09207.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10424544..10424670 639..765 100 -> Plus
2L 10424734..10424832 766..864 98   Plus
2L 10423520..10423680 17..177 100 -> Plus
2L 10423751..10424098 178..525 100 -> Plus
2L 10424371..10424483 526..638 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:26:52 Download gff for BO09207.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10423520..10423680 17..177 100 -> Plus
arm_2L 10423751..10424098 178..525 100 -> Plus
arm_2L 10424371..10424483 526..638 100 -> Plus
arm_2L 10424544..10424670 639..765 100 -> Plus
arm_2L 10424734..10424832 766..864 98   Plus

BO09207.complete Sequence

1258 bp (1258 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ631429

> BO09207.complete
GAAGTTATCAGTCGACATGGCTGCCGAGATAAAACCAGCTCAGCGGACCA
ACAATGATCGCTTTAACACCTCCAAAAAGCCGGAATTGCTGAGTAAGCTG
GAGGGCAGCAGCGACGATGTGAACGCAGCGATCCTAATTCCGGGCGAAAA
CGGCGTAATTAGCGTTTCCGATGACAAAACCGTTCGCGTTTGGCTAAAAC
GCGATTCTGGTCAATATTGGCCTAGCATTTGCCAGTATATGCCTTCCGGC
TGCACGGCCATCGAGTACGTTTCGGAATCCCGGCACCTGTACGTCGGCCA
GGAAAACGGAACGGTCACCCAGTACGCGCTATCCGAAGACTGCAATCGCC
TGTCCTTCCTGCGGGATTACTTGTCCCATCAAGCGCGGGTCATGGCCGTG
GTCTTCTCGAAAACCCACAAGTGGATACTCTCCGCCGGCAAAGATAAGCA
GTTCGCCTATCATTGCACGGAGAGCGGCAAACGGGTGGGCGGATACAACT
TTGAGACACCATGCACGGCTCTCCAGTTCGACGCTTTGGCCAAGTATGCC
TTTGTGGGCGATCATGCTGGACAGATAACAATGCTAAGGTGCGATGTTCA
GGGAGTGCAACTAATTACCACTTTCAATGGACATTCGGCGGAAATCCGGT
GCCTCAAATGGGTGGAAGGCCCTCAGCTCTTGTTTAGCGGAGCTTGCGAT
CAGTCCGTGCTAGTTTGGGATGTTGGTGGCAAACGTGGCACCATTTACGA
GCTGCAGGGACATAGCAACAAAGTTTCCGCCCTGTCGTACGCGAATCACA
CGCAACAACTGATAAGCTGTGGCGAAGATTCAGTAGTGGTTTTTTGGGAA
ATGAATGCAATGCGGAAAGAGGTTCCTGGCTGGGTGGATACCAACAACTG
TCAGCTTTGCTCCAGGCCCTTCTTCTGGAACTTCCGCTCAATGATGGATC
AAAAGCAGCTGGGAATACGACAGCATCATTGTCGCCACTGCGGCAAAGCC
GTGTGCGACAACTGTTCCACCAATCGCATTAACATACCCATAATGGGCTT
CGAGTTTGATGTGCGTACCTGTGATCCGTGCTACAAACAACTTCAGACAG
TCGAGCGCCCCTCGCTGGCTTCATTCAATGACGCCAAGCATTCGATCGTC
TACATGGACCTGGACGAGGACAGAAAGCGCCTGTTGACAGTGGGCCAGGA
CAGGCTCATCAAGATCTGGGATCTCTCCAACATCTGGGCAGCAAGCTTTC
TAGACCAT

BO09207.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:15:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5168-RB 1227 CG5168-PB 1..1224 17..1240 6120 100 Plus
CG5168-RA 1227 CG5168-PA 1..1224 17..1240 6120 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:15:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG5168-RB 1584 CG5168-RB 148..1371 17..1240 6120 100 Plus
CG5168-RA 1623 CG5168-RA 187..1410 17..1240 6120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:15:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10423751..10424100 178..527 1750 100 Plus
2L 23513712 2L 10424991..10425269 962..1240 1395 100 Plus
2L 23513712 2L 10424731..10424931 763..963 1005 100 Plus
2L 23513712 2L 10423520..10423680 17..177 805 100 Plus
2L 23513712 2L 10424543..10424670 638..765 640 100 Plus
2L 23513712 2L 10424371..10424483 526..638 565 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:15:20 has no hits.

BO09207.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:07:34 Download gff for BO09207.complete
Subject Subject Range Query Range Percent Splice Strand
CG5168-RA 1..1227 17..1244 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:27:36 Download gff for BO09207.complete
Subject Subject Range Query Range Percent Splice Strand
CG5168-RA 206..1432 17..1244 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:37:58 Download gff for BO09207.complete
Subject Subject Range Query Range Percent Splice Strand
CG5168-RA 187..1410 17..1242 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:07:34 Download gff for BO09207.complete
Subject Subject Range Query Range Percent Splice Strand
CG5168-RA 206..1432 17..1244 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:06:58 Download gff for BO09207.complete
Subject Subject Range Query Range Percent Splice Strand
CG5168-RA 187..1410 17..1242 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:06:58 Download gff for BO09207.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10424544..10424670 639..765 100 -> Plus
2L 10424734..10424930 766..962 100 -> Plus
2L 10424992..10425269 963..1242 99   Plus
2L 10423520..10423680 17..177 100 -> Plus
2L 10423751..10424098 178..525 100 -> Plus
2L 10424371..10424483 526..638 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:37:58 Download gff for BO09207.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10424544..10424670 639..765 100 -> Plus
arm_2L 10424734..10424930 766..962 100 -> Plus
arm_2L 10423520..10423680 17..177 100 -> Plus
arm_2L 10423751..10424098 178..525 100 -> Plus
arm_2L 10424371..10424483 526..638 100 -> Plus
arm_2L 10424992..10425269 963..1242 99   Plus

BO09207.pep Sequence

Translation from 16 to 1258

> BO09207.pep
MAAEIKPAQRTNNDRFNTSKKPELLSKLEGSSDDVNAAILIPGENGVISV
SDDKTVRVWLKRDSGQYWPSICQYMPSGCTAIEYVSESRHLYVGQENGTV
TQYALSEDCNRLSFLRDYLSHQARVMAVVFSKTHKWILSAGKDKQFAYHC
TESGKRVGGYNFETPCTALQFDALAKYAFVGDHAGQITMLRCDVQGVQLI
TTFNGHSAEIRCLKWVEGPQLLFSGACDQSVLVWDVGGKRGTIYELQGHS
NKVSALSYANHTQQLISCGEDSVVVFWEMNAMRKEVPGWVDTNNCQLCSR
PFFWNFRSMMDQKQLGIRQHHCRHCGKAVCDNCSTNRINIPIMGFEFDVR
TCDPCYKQLQTVERPSLASFNDAKHSIVYMDLDEDRKRLLTVGQDRLIKI
WDLSNIWAASFLDH

BO09207.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:40:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG5168-PB 408 CG5168-PB 1..408 1..408 2205 100 Plus
CG5168-PA 408 CG5168-PA 1..408 1..408 2205 100 Plus