Clone Sequence Records
BO09219.3prime Sequence
900 bp (881 high quality bases) assembled on 2006-01-18
> BO09219.3prime
ATGGTCTAGAAAGCTTGCATGAAGTTCGTCTCCGGATGTGACCTCCACTA
CCGATCGCACCTCTCCGGACAAACGACTCTGCAGATTCTTGTTGATATTG
TCCACCATGTCGAAGGCATCTATGATCATTTGGGCCTCGCCCTGCGCCTT
TTCGCTCATCTGTTCCAGACTTTTTCGCAACTCCCTGTGCTCTCCAGTAG
TGTCCCGCTGCTCCGCCTTCTGATACAAGCTGGTTCGCGAGAAGAGGGCG
GTGGACGTCATGTGATCGGGGTGCTTCTCCAGTTCTTCGGGCAGTGGAAA
GTCAATATCAAAAGAGAATCGTTGCAACTCCTCATACTTCGCGTCCTGGA
CCTCTTTGTCCTGGCCATAGCTGATGACCACCGCCTGGAGGACGATGTCG
CTACCAGGAAGTTGCATGTAGGCAATAACGTCCTTAAAGAGATTCTCTTT
CCTCCACACGGTTTGTCTGTACTGCACCACCTGGTATACCACCATCTCCG
GTTCGGGACTGTATTGCACCAGCATCCAAGTGTCATCATTCATGGCCTCC
GGTTCAGCTTCCAAATTATCATCGAAGGCGAGATCAAAGCTTCGCGCTTT
CAGGTGCAGTAGTATCTTTTCCATATAATCACGACTTTCGTAGGCATATA
GGATGTGGGCAATGCAGCCGGGAGCCAACCTCACCAGAGGATTACCCTTC
AGCTCGGGCTTGGTGCTCAGCAGCATTACATTGTTTGGAGAAACAAGTTT
CTGGATGAGGCGCTCGCCCGCCTTTTCATTCTCGGTGTACTGGACCAACA
GTTGCTGGCCGCCGGCATCTTCCCTCTCCTCCTTGCTCATGGACAGCAAT
GCTGCATCCACCAGGCGCCTCTCATCCGCTGCCAGTATGAGTTTCGCCTC
BO09219.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:37:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15634-PA | 1140 | CG15634-RA | 256..1137 | 900..19 | 4410 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:53:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba3-RA | 1446 | CG15634-RA | 394..1275 | 900..19 | 4410 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:53:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4687904..4688785 | 900..19 | 4410 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:53:54 has no hits.
BO09219.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:04:54 Download gff for
BO09219.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15634-PA | 256..1140 | 18..900 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:06:32 Download gff for
BO09219.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15634-PA | 256..1140 | 18..900 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:44:50 Download gff for
BO09219.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 394..1280 | 11..900 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:47:43 Download gff for
BO09219.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 394..1280 | 11..900 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:47:43 Download gff for
BO09219.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4687904..4688790 | 11..900 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:44:50 Download gff for
BO09219.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4687904..4688790 | 11..900 | 99 | | Minus |
BO09219.5prime Sequence
892 bp (839 high quality bases) assembled on 2006-01-18
> BO09219.5prime
GAAGTTATCAGTCGACATGAGCAACATCAGCAACGACAGTGGATTGGATG
ACTCCGCGAACAGTGGAGCCGTTGTCAGCGCCAATGGACCATTGGCAGCG
ACTCGGTTATCCTGGTTCCTGGCCGAAGTCGATGACGGCTTGATGAAGGA
TGGGAAGCCAAATGGTCGACGCCGTCTCTGCGTTCTCCATTCGATGGAAC
TCCTAGAGTCAGATGTTTCAGACAAATACATGACCCGATTCGTAGAATTC
CGGGTCAATGGAATGGTGCTGGAGGCGAAACTCATACTGGCAGCGGATGA
GAGGCGCCTGGTGGATGCAGCATTGCTGTCCATGAGCAAGGAGGAGAGGG
AAGATGCCGGCGGCCAGCAACTGTTGGTCCAGTACACCGAGAATGAAAAG
GCGGGCGAGCGCCTCATCCAGAAACTTGTTTCTCCAAACAATGTAATGCT
GCTGAGCACCAAGCCCGAGCTGAAGGGTAATCCTCTGGTGAGGTTGGCTC
CCGGCTGCATTGCCCACATCCTATATGCCTACGAAAGTCGTGATTATATG
GAAAAGATACTACTGCACCTGAAAGCGCGAAGCTTTGATCTCGCCTTCGA
TGATAATTTGGAAGCTGAACCGGAGGCCATGAATGATGACACTTGGATGC
TGGTGCAATACAGTCCCGAACCGGAGATGGTGGTATACCAGGTGGTGCAG
TACAGACAAACCGTGTGGAGGAAAGAGAATCTCTTTAAGGACGTTATTGC
CTACATGCAACTTCCTGGTAGCGACATCGTCCTCCAGGCGGTGGTCATCA
GCTATGGCCAGGACAAAGAGGTCCAGGACGCGAAGTATGAGGAGTTGCAA
CGATTCTCTTTTGATATTGACTTTCCACTGCCCGAAGAACTG
BO09219.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:37:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15634-PA | 1140 | CG15634-RA | 1..876 | 17..892 | 4380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:35:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba3-RA | 1446 | CG15634-RA | 138..1014 | 16..892 | 4385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4687648..4688524 | 16..892 | 4385 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:35:33 has no hits.
BO09219.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:04:55 Download gff for
BO09219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15634-PA | 1..876 | 17..892 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:06:33 Download gff for
BO09219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15634-PA | 1..876 | 17..892 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:09:47 Download gff for
BO09219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 129..1014 | 7..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:14:55 Download gff for
BO09219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 129..1014 | 7..892 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:14:55 Download gff for
BO09219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4687639..4688524 | 7..892 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:09:47 Download gff for
BO09219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4687639..4688524 | 7..892 | 99 | | Plus |
BO09219.complete Sequence
1171 bp (1171 high quality bases) assembled on 2006-01-25
GenBank Submission: FJ631432
> BO09219.complete
GAAGTTATCAGTCGACATGAGCAACATCAGCAACGACAGTGGATTGGATG
ACTCCGCGAACAGTGGAGCCGTTGTCAGCGCCAATGGACCATTGGCAGCG
ACTCGGTTATCCTGGTTCCTGGCCGAAGTCGATGACGGCTTGATGAAGGA
TGGGAAGCCAAATGGTCGACGCCGTCTCTGCGTTCTCCATTCGATGGAAC
TCCTAGAGTCAGATGTTTCAGACAAATACATGACCCGATTCGTAGAATTC
CGGGTCAATGGAATGGTGCTGGAGGCGAAACTCATACTGGCAGCGGATGA
GAGGCGCCTGGTGGATGCAGCATTGCTGTCCATGAGCAAGGAGGAGAGGG
AAGATGCCGGCGGCCAGCAACTGTTGGTCCAGTACACCGAGAATGAAAAG
GCGGGCGAGCGCCTCATCCAGAAACTTGTTTCTCCAAACAATGTAATGCT
GCTGAGCACCAAGCCCGAGCTGAAGGGTAATCCTCTGGTGAGGTTGGCTC
CCGGCTGCATTGCCCACATCCTATATGCCTACGAAAGTCGTGATTATATG
GAAAAGATACTACTGCACCTGAAAGCGCGAAGCTTTGATCTCGCCTTCGA
TGATAATTTGGAAGCTGAACCGGAGGCCATGAATGATGACACTTGGATGC
TGGTGCAATACAGTCCCGAACCGGAGATGGTGGTATACCAGGTGGTGCAG
TACAGACAAACCGTGTGGAGGAAAGAGAATCTCTTTAAGGACGTTATTGC
CTACATGCAACTTCCTGGTAGCGACATCGTCCTCCAGGCGGTGGTCATCA
GCTATGGCCAGGACAAAGAGGTCCAGGACGCGAAGTATGAGGAGTTGCAA
CGATTCTCTTTTGATATTGACTTTCCACTGCCCGAAGAACTGGAGAAGCA
CCCCGATCACATGACGTCCACCGCCCTCTTCTCGCGAACCAGCTTGTATC
AGAAGGCGGAGCAGCGGGACACTACTGGAGAGCACAGGGAGTTGCGAAAA
AGTCTGGAACAGATGAGCGAAAAGGCGCAGGGCGAGGCCCAAATGATCAT
AGATGCCTTCGACATGGTGGACAATATCAACAAGAATCTGCAGAGTCGTT
TGTCCGGAGAGGTGCGATCGGTAGTGGAGGTCACATCCGGAGACGAACTT
CATGCAAGCTTTCTAGACCAT
BO09219.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba3-RA | 1140 | CG15634-PA | 1..1137 | 17..1153 | 5685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:41:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba3-RA | 1446 | CG15634-RA | 138..1275 | 16..1153 | 5690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:41:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4687648..4688785 | 16..1153 | 5690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:41:55 has no hits.
BO09219.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:23 Download gff for
BO09219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15634-RA | 1..1140 | 17..1154 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:32:28 Download gff for
BO09219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15634-RA | 127..1278 | 7..1161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:29:47 Download gff for
BO09219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 139..1275 | 17..1155 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:23 Download gff for
BO09219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15634-RA | 127..1278 | 7..1161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:36:26 Download gff for
BO09219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 139..1275 | 17..1155 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:36:26 Download gff for
BO09219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4687649..4688785 | 17..1155 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:29:47 Download gff for
BO09219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4687649..4688785 | 17..1155 | 99 | | Plus |
BO09219.pep Sequence
Translation from 16 to 1171
> BO09219.pep
MSNISNDSGLDDSANSGAVVSANGPLAATRLSWFLAEVDDGLMKDGKPNG
RRRLCVLHSMELLESDVSDKYMTRFVEFRVNGMVLEAKLILAADERRLVD
AALLSMSKEEREDAGGQQLLVQYTENEKAGERLIQKLVSPNNVMLLSTKP
ELKGNPLVRLAPGCIAHILYAYESRDYMEKILLHLKARSFDLAFDDNLEA
EPEAMNDDTWMLVQYSPEPEMVVYQVVQYRQTVWRKENLFKDVIAYMQLP
GSDIVLQAVVISYGQDKEVQDAKYEELQRFSFDIDFPLPEELEKHPDHMT
STALFSRTSLYQKAEQRDTTGEHRELRKSLEQMSEKAQGEAQMIIDAFDM
VDNINKNLQSRLSGEVRSVVEVTSGDELHASFLDH
BO09219.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba3-PA | 379 | CG15634-PA | 1..379 | 1..379 | 1923 | 100 | Plus |
