Clone BO09254 Report

Search the DGRC for BO09254

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:92
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptBEAF-32-RB
Protein status:BO09254.pep: Imported from assembly
Sequenced Size:880

Clone Sequence Records

BO09254.3prime Sequence

814 bp (796 high quality bases) assembled on 2006-01-18

> BO09254.3prime
ATGGTCTAGAAAGCTTGCCTCATCCTTGGCAAGCGTTGAGTCCTCACTTT
CCTTGAACAGTATATCCTGGATCTTGGACCGCACGTACATCTTCCGACTG
AGCGAAAGGTGGCGCATTGCGGGCACCAAGCTAAGTGCAAAATAGTAGTC
GTCGTCCTTGGTGAGCTCCTCGTGATTCTGTTGTATGATGTAGCTGAGCT
GTTCGCTGACAGCGGTCAGCCGTTCGATGGACGTCTCCAGGTTGTTCTTC
AGCTGCTTGGCCGAGCTGCTGCTGGAGGACGTGGAGGCCACCACAGTAGC
CTGTACGCCCGAACCAACACCGATGGGCCTGCTACTTCCACCGGCTGGTG
AAGTCGAATGGGTTAGCACGGTCACTTGCTTCTCAGGCTGATCCAGGCCC
TCATCATCCATCACGTGTATAGGACTATAGCACAGTGGATCCTCGCTGTA
TATGATGTCCTTAATGTCCTCGCTAATCTCATCGTTCTGCTCGTACTCCT
CCCACTTTTGCGGCAGGGCGCCCGCCTCGCCCAGATAATTGGCGACGTTC
GACTCGATCTTCGGCTTGGCCACACGCAGCGGCTCCCTCAGCGTCTTGGC
CTTGGTAATCCGCACGGTTTTGTCTTTCTTGATGATTGGGATCATCCGGG
CCTGGGGACGTTGCTGCACCGGACTGACCAGCACCTCGTCCCTGTGCTTG
TGCCGCAGATGCGTCCACAAATTGGTCGTATTGTTGCCCTTCAAATTGCT
GGCCATGCCACCACGCGATATATTGTTGCCGCAATAACGGCATATCGCAA
AGTTTTCGCACTCC

BO09254.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:38:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG10159-PB 849 BEAF-32-RB 51..846 814..19 3980 100 Minus
CG10159-PA 852 BEAF-32-RA 244..849 624..19 3030 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
BEAF-32-RC 1558 CG10159-RC 537..1332 814..19 3980 100 Minus
BEAF-32-RB 1173 CG10159-RB 152..947 814..19 3980 100 Minus
BEAF-32-RA 1192 CG10159-RA 361..966 624..19 3030 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14771798..14772404 625..19 3035 100 Minus
2R 25286936 2R 14771452..14771642 814..624 955 100 Minus
Blast to na_te.dros performed on 2015-02-12 03:54:06 has no hits.

BO09254.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:05:48 Download gff for BO09254.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10159-PB 51..849 18..814 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:07:49 Download gff for BO09254.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10159-PB 51..849 18..814 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:44:54 Download gff for BO09254.3prime
Subject Subject Range Query Range Percent Splice Strand
BEAF-32-RB 152..952 13..814 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:48:11 Download gff for BO09254.3prime
Subject Subject Range Query Range Percent Splice Strand
BEAF-32-RB 152..952 13..814 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:48:11 Download gff for BO09254.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 14771452..14771642 624..814 100 -> Minus
2R 14771800..14772409 13..623 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:44:54 Download gff for BO09254.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10658957..10659147 624..814 100 -> Minus
arm_2R 10659305..10659914 13..623 99   Minus

BO09254.5prime Sequence

868 bp (785 high quality bases) assembled on 2006-01-18

> BO09254.5prime
GAAGTTATCAGTCGGCATGCCCAAGGGTCGTGTTAGCAATGTGTGGCAGC
ACTACGATATTAACGAGGAGTGCGAAAACTTTGCGATATGCCGTTATTGC
GGCAACAATATATCGCGTGGTGGCATGGCCAGCAATTTGAAGGGCAACAA
TACGACCAATTTGTGGACGCATCTGCGGCACAAGCACAGGGACGAGGTGC
TGGTCAGTCCGGTGCAGCAACGTCCCCAGGCCCGGATGATCCCAATCATC
AAGAAAGACAAAACCGTGCGGATTACCAAGGCCAAGACGCTGAGGGAGCC
GCTGCGTGTGGCCAAGCCGAAGATCGAGTCGAACGTCGCCAATTATCTGG
GCGAGGCGGGCGCCCTGCCGCAAAAGTGGGAGGAGTACGAGCAGAACGAT
GAGATTAGCGAGGACATTAAGGACATCATATACAGCGAGGATCCACTGTG
CTATAGTCCTATACACGTGATGGATGATGAGGGCCTGGATCAGCCTGAGA
AGCAAGTGACCGTGCTAACCCATTCGACTTCACCAGCCGGTGGAAGTAGC
AGGCCCATCGGTGTTGGTTCGGGCGTACAGGCTACTGTGGTGGCCTCCAC
GTCCTCCAGCAGCAGCTCGGCCAAGCAGCTGAAGAACAACCTGGAGACGT
CCATCGAACGGCTGACCGCTGTCAGCGAACAGCTCAGCTACATCATACAA
CAGAATCACGAGGAGCTCACCAAGGACGACGACTACTATTTTGCACTTAG
CTTGGTGCCCGCAATGCGCCACCTTTCGCTCAGTCGGAAGATGTACGTGC
GGTCCAAGATCCAGGATATACTGTTCAAGGAAAGTGAGGACTCAACGCTT
GCCCAAGATGAGGCAAGC

BO09254.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:38:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10159-PB 849 BEAF-32-RB 1..837 17..853 4185 100 Plus
CG10159-PA 852 BEAF-32-RA 244..840 257..853 2985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:34:07
Subject Length Description Subject Range Query Range Score Percent Strand
BEAF-32-RC 1558 CG10159-RC 487..1332 17..862 4200 99.8 Plus
BEAF-32-RB 1173 CG10159-RB 102..947 17..862 4200 99.8 Plus
BEAF-32-RA 1192 CG10159-RA 361..966 257..862 3000 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14771798..14772404 256..862 3005 99.7 Plus
2R 25286936 2R 14771402..14771642 17..257 1205 100 Plus
Blast to na_te.dros performed on 2015-02-10 23:34:05 has no hits.

BO09254.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:05:49 Download gff for BO09254.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10159-PB 1..849 17..863 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:07:49 Download gff for BO09254.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10159-PB 1..849 17..863 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:35:08 Download gff for BO09254.5prime
Subject Subject Range Query Range Percent Splice Strand
BEAF-32-RB 102..952 17..868 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:11:02 Download gff for BO09254.5prime
Subject Subject Range Query Range Percent Splice Strand
BEAF-32-RB 102..952 17..868 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:11:02 Download gff for BO09254.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 14771402..14771642 17..257 100 -> Plus
2R 14771800..14772409 258..868 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:35:08 Download gff for BO09254.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10658907..10659147 17..257 100 -> Plus
arm_2R 10659305..10659914 258..868 99   Plus

BO09254.complete Sequence

880 bp assembled on 2008-08-15

GenBank Submission: FJ631447

> BO09254.complete
GAAGTTATCAGTCGGCATGCCCAAGGGTCGTGTTAGCAATGTGTGGCAGC
ACTACGATATTAACGAGGAGTGCGAAAACTTTGCGATATGCCGTTATTGC
GGCAACAATATATCGCGTGGTGGCATGGCCAGCAATTTGAAGGGCAACAA
TACGACCAATTTGTGGACGCATCTGCGGCACAAGCACAGGGACGAGGTGC
TGGTCAGTCCGGTGCAGCAACGTCCCCAGGCCCGGATGATCCCAATCATC
AAGAAAGACAAAACCGTGCGGATTACCAAGGCCAAGACGCTGAGGGAGCC
GCTGCGTGTGGCCAAGCCGAAGATCGAGTCGAACGTCGCCAATTATCTGG
GCGAGGCGGGCGCCCTGCCGCAAAAGTGGGAGGAGTACGAGCAGAACGAT
GAGATTAGCGAGGACATTAAGGACATCATATACAGCGAGGATCCACTGTG
CTATAGTCCTATACACGTGATGGATGATGAGGGCCTGGATCAGCCTGAGA
AGCAAGTGACCGTGCTAACCCATTCGACTTCACCAGCCGGTGGAAGTAGC
AGGCCCATCGGTGTTGGTTCGGGCGTACAGGCTACTGTGGTGGCCTCCAC
GTCCTCCAGCAGCAGCTCGGCCAAGCAGCTGAAGAACAACCTGGAGACGT
CCATCGAACGGCTGACCGCTGTCAGCGAACAGCTCAGCTACATCATACAA
CAGAATCACGAGGAGCTCACCAAGGACGACGACTACTATTTTGCACTTAG
CTTGGTGCCCGCAATGCGCCACCTTTCGCTCAGTCGGAAGATGTACGTGC
GGTCCAAGATCCAGGATATACTGTTCAAGGAAAGTGAGGACTCAACGCTT
GCCAAGGATGAGGCAAGCTTTCTAGACCAT

BO09254.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:45:20
Subject Length Description Subject Range Query Range Score Percent Strand
BEAF-32-RC 849 CG10159-PC 1..846 17..862 4230 100 Plus
BEAF-32-RB 849 CG10159-PB 1..846 17..862 4230 100 Plus
BEAF-32-RA 852 CG10159-PA 244..849 257..862 3030 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
BEAF-32-RC 1558 CG10159-RC 487..1332 17..862 4230 100 Plus
BEAF-32-RB 1173 CG10159-RB 102..947 17..862 4230 100 Plus
BEAF-32-RA 1192 CG10159-RA 361..966 257..862 3030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14771798..14772404 256..862 3035 100 Plus
2R 25286936 2R 14771402..14771642 17..257 1205 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:45:19 has no hits.

BO09254.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:47:20 Download gff for BO09254.complete
Subject Subject Range Query Range Percent Splice Strand
BEAF-32-RB 465..1315 17..868 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:53 Download gff for BO09254.complete
Subject Subject Range Query Range Percent Splice Strand
BEAF-32-RB 102..947 17..864 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:58:13 Download gff for BO09254.complete
Subject Subject Range Query Range Percent Splice Strand
BEAF-32-RB 465..1310 17..864 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:42 Download gff for BO09254.complete
Subject Subject Range Query Range Percent Splice Strand
BEAF-32-RB 102..947 17..864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:42 Download gff for BO09254.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14771402..14771642 17..257 100 -> Plus
2R 14771800..14772404 258..864 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:53 Download gff for BO09254.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10658907..10659147 17..257 100 -> Plus
arm_2R 10659305..10659909 258..864 99   Plus

BO09254.pep Sequence

Translation from 16 to 880

> BO09254.pep
MPKGRVSNVWQHYDINEECENFAICRYCGNNISRGGMASNLKGNNTTNLW
THLRHKHRDEVLVSPVQQRPQARMIPIIKKDKTVRITKAKTLREPLRVAK
PKIESNVANYLGEAGALPQKWEEYEQNDEISEDIKDIIYSEDPLCYSPIH
VMDDEGLDQPEKQVTVLTHSTSPAGGSSRPIGVGSGVQATVVASTSSSSS
SAKQLKNNLETSIERLTAVSEQLSYIIQQNHEELTKDDDYYFALSLVPAM
RHLSLSRKMYVRSKIQDILFKESEDSTLAKDEASFLDH

BO09254.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:31:51
Subject Length Description Subject Range Query Range Score Percent Strand
BEAF-32-PC 282 CG10159-PC 1..282 1..282 1457 100 Plus
BEAF-32-PB 282 CG10159-PB 1..282 1..282 1457 100 Plus
BEAF-32-PA 283 CG10159-PA 25..283 2..282 1034 76.2 Plus