Clone BO09256 Report

Search the DGRC for BO09256

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:92
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCyp310a1-RA
Protein status:BO09256.pep: validated full length
Sequenced Size:1510

Clone Sequence Records

BO09256.3prime Sequence

906 bp (850 high quality bases) assembled on 2006-01-18

> BO09256.3prime
ATGGTCTAGAAAGCTTGCGCTGTAAAATTTCGTGTTTATTTCGCGTCTCT
TCAATTTGACTTTCAGCCCATCCTTTGTGTGTATAAAAGGAGCTGGCCGG
TGGGAAACTTTAAGGGTCTTCACCTGGTTCGCATCCAATTCCAAATGAAA
GTTTTGGAGTAATTTGATCAGGGCCACTTTAATTACCAACTTTGCAAAGT
TCTGTCCCACACACTGCGATCCCCCAATGCCAAATCCTATAAAAACATTG
CTCTTTGTCTTGTCTTCACATTGGCCCACATCGTTGGCAGTTTGCAGAAA
TCGAAGTGGCTTGTATTTCATAGGCTCACTGAAGTATTTTTCATCTCGGT
GCATAGCCAGTAGAGGCACCATCAAAGTCTTTCCCTCATCAATTGTGAAT
TTTGAATTGGGTAGCGAATAACTTTTGCGGCAAACACGTTCAATAATGGG
TAGAGGTGGATATTTGCGAAGAGTTTCTTTCAAGCACATGTCCATATACC
TAAGACCATTAAGCTCTTCAAATTTGAGCTGACCATTTTCATTGCTTAGC
TCCTTTATTTCCGCTCTCAGTTTTTCCACTATTAAAGGTTCTTGCAGGAT
TTCCAAGAGAGTGAAGGTTACAGTTGAAGCTACTGCATCTAGAGATACTT
TCAAGAGATCCTCGGCAACTTTGGCCAAGCGTTTGATGGACAACAGTTTG
TCTGCATCATTAATCGGTTCTAGTTGCCATTTATCGCCGCTAACTTCGTT
GCCATTTCTAAATCTGACTAGTAGTTGTAGAATATCTTTACGTATCAGTC
CATGATCTTCTCGTAGTTCAACGCTTTGTTTAATGAGATCTCTTAAGCGG
TAGGTATATGAAGATTTCTGCGGCAGGCGACCCAAAGTGAAGGATTGTAT
CGAGGC

BO09256.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:38:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG10391-PA 1479 Cyp310a1-RA 589..1476 906..19 4440 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp310a1-RA 1658 CG10391-RA 655..1542 906..19 4440 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:15:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18651425..18651697 206..478 1365 100 Plus
2L 23513712 2L 18651755..18651986 477..708 1160 100 Plus
2L 23513712 2L 18651174..18651362 19..207 945 100 Plus
2L 23513712 2L 18652038..18652219 708..889 910 100 Plus
Blast to na_te.dros performed on 2015-02-11 23:15:41 has no hits.

BO09256.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:05:52 Download gff for BO09256.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10391-PA 589..1479 15..906 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:07:54 Download gff for BO09256.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10391-PA 589..1479 15..906 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:33:23 Download gff for BO09256.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp310a1-RA 655..1548 12..906 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:36:08 Download gff for BO09256.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp310a1-RA 655..1548 12..906 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:36:08 Download gff for BO09256.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18651168..18651361 12..206 98 <- Plus
2L 18651426..18651695 207..476 100 <- Plus
2L 18651755..18651985 477..707 100 <- Plus
2L 18652038..18652219 708..889 100 <- Plus
2L 18652281..18652297 890..906 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:33:23 Download gff for BO09256.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18651168..18651361 12..206 98 <- Plus
arm_2L 18651426..18651695 207..476 100 <- Plus
arm_2L 18651755..18651985 477..707 100 <- Plus
arm_2L 18652038..18652219 708..889 100 <- Plus
arm_2L 18652281..18652297 890..906 100   Plus

BO09256.5prime Sequence

879 bp (788 high quality bases) assembled on 2006-01-17

> BO09256.5prime
GAAGTTATCAGTCGACATGTGGCTGCTGTTGCCTATTCTGCTATATTCGG
CGGTATTCCTCTCGGTGCGGCACATTTACAGCCACTGGCGACGCAGGGGA
TTCCCCTCGGAAAAGGCCGGCATTACGTGGAGTTTCCTGCAAAAGGCCTA
CAGACGGGAGTTCCGACACGTGGAGGCCATCTGTGAGGCCTACCAGTCGG
GCAAGGATCGGCTTCTGGGCATCTACTGCTTCTTCAGGCCTGTCCTTCTG
GTGCGAAATGTGGAGCTAGCCCAGACGATTCTGCAGCAATCAAATGGACA
CTTCAGCGAACTGAAGTGGGACTATATCTCGGGTTATCGCAGGTTCAATT
TGCTGGAGAAACTGGCGCCCATGTTTGGCACCAAACGATTGTCCGAGATG
TTCGGGCAGGTCCAGAAAGTGGGTGATCATTTAATTCACCATTTGCTGGA
CAGGCAAGGCCAAGGATGTCCACAGGAAGTGGATATCCAGCAAAAACTCA
GAGTTTATTCCGTCAACATAATTGCCAATCTGATTTACGGCTTGGACATT
AATAACTTTGAGCACGAGGATCATATCTTGACCAGCTACCTGAGCCATAG
TCAGGCCTCGATACAATCCTTCACTTTGGGTCGCCTGCCGCAGAAATCTT
CATATACCTACCGCTTAAGAGATCTCATTAAACAAAGCGTTGAACTACGA
GAAGATCATGGACTGATACGTAAAGATATTCTACAACTACTAGTCAGATT
TAGAAATGGCAACGAAGTTAGCGGCGATAAATGGCAACTAGAACCGATTA
ATGATGCAAACAAACTGTTGTCCATCAAACGCTTGGCCAAAGTTGCCGAG
GATCTCTTGAAAGTATCTCTAGATGCAGT

BO09256.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:38:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG10391-PA 1479 Cyp310a1-RA 1..863 17..879 4290 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:31:40
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp310a1-RA 1658 CG10391-RA 67..929 17..879 4300 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:31:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18652457..18652944 504..17 2440 100 Minus
2L 23513712 2L 18652038..18652219 803..622 910 100 Minus
2L 23513712 2L 18652281..18652397 621..505 585 100 Minus
2L 23513712 2L 18651910..18651986 879..803 370 98.7 Minus
Blast to na_te.dros performed on 2015-02-13 07:31:39 has no hits.

BO09256.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:05:53 Download gff for BO09256.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10391-PA 1..863 17..879 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:07:55 Download gff for BO09256.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10391-PA 1..863 17..879 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:47:42 Download gff for BO09256.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp310a1-RA 63..929 9..879 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:27:54 Download gff for BO09256.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp310a1-RA 63..929 9..879 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:27:54 Download gff for BO09256.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18652281..18652397 505..621 100 <- Minus
2L 18652457..18652948 9..504 99   Minus
2L 18651910..18651985 804..879 98 <- Minus
2L 18652038..18652219 622..803 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:47:42 Download gff for BO09256.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18651910..18651985 804..879 98 <- Minus
arm_2L 18652038..18652219 622..803 100 <- Minus
arm_2L 18652281..18652397 505..621 100 <- Minus
arm_2L 18652457..18652948 9..504 99   Minus

BO09256.complete Sequence

1510 bp (1510 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ631449

> BO09256.complete
GAAGTTATCAGTCGACATGTGGCTGCTGTTGCCTATTCTGCTATATTCGG
CGGTATTCCTCTCGGTGCGGCACATTTACAGCCACTGGCGACGCAGGGGA
TTCCCCTCGGAAAAGGCCGGCATTACGTGGAGTTTCCTGCAAAAGGCCTA
CAGACGGGAGTTCCGACACGTGGAGGCCATCTGTGAGGCCTACCAGTCGG
GCAAGGATCGGCTTCTGGGCATCTACTGCTTCTTCAGGCCTGTCCTTCTG
GTGCGAAATGTGGAGCTAGCCCAGACGATTCTGCAGCAATCAAATGGACA
CTTCAGCGAACTGAAGTGGGACTATATCTCGGGTTATCGCAGGTTCAATT
TGCTGGAGAAACTGGCGCCCATGTTTGGCACCAAACGATTGTCCGAGATG
TTCGGGCAGGTCCAGAAAGTGGGTGATCATTTAATTCACCATTTGCTGGA
CAGGCAAGGCCAAGGATGTCCACAGGAAGTGGATATCCAGCAAAAACTCA
GAGTTTATTCCGTCAACATAATTGCCAATCTGATTTACGGCTTGGACATT
AATAACTTTGAGCACGAGGATCATATCTTGACCAGCTACCTGAGCCATAG
TCAGGCCTCGATACAATCCTTCACTTTGGGTCGCCTGCCGCAGAAATCTT
CATATACCTACCGCTTAAGAGATCTCATTAAACAAAGCGTTGAACTACGA
GAAGATCATGGACTGATACGTAAAGATATTCTACAACTACTAGTCAGATT
TAGAAATGGCAACGAAGTTAGCGGCGATAAATGGCAACTAGAACCGATTA
ATGATGCAGACAAACTGTTGTCCATCAAACGCTTGGCCAAAGTTGCCGAG
GATCTCTTGAAAGTATCTCTAGATGCAGTAGCTTCAACTGTAACCTTCAC
TCTCTTGGAAATCCTGCAAGAACCTTTAATAGTGGAAAAACTGAGAGCGG
AAATAAAGGAGCTAAGCAATGAAAATGGTCAGCTCAAATTTGAAGAGCTT
AATGGTCTTAGGTATATGGACATGTGCTTGAAAGAAACTCTTCGCAAATA
TCCACCTCTACCCATTATTGAACGTGTTTGCCGCAAAAGTTATTCGCTAC
CCAATTCAAAATTCACAATTGATGAGGGAAAGACTTTGATGGTGCCTCTA
CTGGCTATGCACCGAGATGAAAAATACTTCAGTGAGCCTATGAAATACAA
GCCACTTCGATTTCTGCAAACTGCCAACGATGTGGGCCAATGTGAAGACA
AGACAAAGAGCAATGTTTTTATAGGATTTGGCATTGGGGGATCGCAGTGT
GTGGGACAGAACTTTGCAAAGTTGGTAATTAAAGTGGCCCTGATCAAATT
ACTCCAAAACTTTCATTTGGAATTGGATGCGAACCAGGTGAAGACCCTTA
AAGTTTCCCACCGGCCAGCTCCTTTTATACACACAAAGGATGGGCTGAAA
GTCAAATTGAAGAGACGCGAAATAAACACGAAATTTTACAGCGCAAGCTT
TCTAGACCAT

BO09256.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:06:42
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp310a1-RA 1479 CG10391-PA 1..1476 17..1492 7380 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp310a1-RA 1658 CG10391-RA 67..1542 17..1492 7380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18652457..18652944 504..17 2440 100 Minus
2L 23513712 2L 18651425..18651697 1305..1033 1365 100 Minus
2L 23513712 2L 18651755..18651986 1034..803 1160 100 Minus
2L 23513712 2L 18651174..18651362 1492..1304 945 100 Minus
2L 23513712 2L 18652038..18652219 803..622 910 100 Minus
2L 23513712 2L 18652281..18652397 621..505 585 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:06:41 has no hits.

BO09256.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:07:17 Download gff for BO09256.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp310a1-RA 1..1479 17..1496 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:27:13 Download gff for BO09256.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp310a1-RA 37..1522 9..1499 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:19 Download gff for BO09256.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp310a1-RA 67..1542 17..1494 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:07:17 Download gff for BO09256.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp310a1-RA 37..1522 9..1499 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:10:52 Download gff for BO09256.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp310a1-RA 67..1542 17..1494 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:10:52 Download gff for BO09256.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18651172..18651361 1305..1494 98 <- Minus
2L 18651426..18651695 1035..1304 100 <- Minus
2L 18651755..18651985 804..1034 100 <- Minus
2L 18652038..18652219 622..803 100 <- Minus
2L 18652281..18652397 505..621 100 <- Minus
2L 18652457..18652944 17..504 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:19 Download gff for BO09256.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18651172..18651361 1305..1494 98 <- Minus
arm_2L 18651426..18651695 1035..1304 100 <- Minus
arm_2L 18651755..18651985 804..1034 100 <- Minus
arm_2L 18652038..18652219 622..803 100 <- Minus
arm_2L 18652281..18652397 505..621 100 <- Minus
arm_2L 18652457..18652944 17..504 100   Minus

BO09256.pep Sequence

Translation from 16 to 1510

> BO09256.pep
MWLLLPILLYSAVFLSVRHIYSHWRRRGFPSEKAGITWSFLQKAYRREFR
HVEAICEAYQSGKDRLLGIYCFFRPVLLVRNVELAQTILQQSNGHFSELK
WDYISGYRRFNLLEKLAPMFGTKRLSEMFGQVQKVGDHLIHHLLDRQGQG
CPQEVDIQQKLRVYSVNIIANLIYGLDINNFEHEDHILTSYLSHSQASIQ
SFTLGRLPQKSSYTYRLRDLIKQSVELREDHGLIRKDILQLLVRFRNGNE
VSGDKWQLEPINDADKLLSIKRLAKVAEDLLKVSLDAVASTVTFTLLEIL
QEPLIVEKLRAEIKELSNENGQLKFEELNGLRYMDMCLKETLRKYPPLPI
IERVCRKSYSLPNSKFTIDEGKTLMVPLLAMHRDEKYFSEPMKYKPLRFL
QTANDVGQCEDKTKSNVFIGFGIGGSQCVGQNFAKLVIKVALIKLLQNFH
LELDANQVKTLKVSHRPAPFIHTKDGLKVKLKRREINTKFYSASFLDH

BO09256.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:41:07
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp310a1-PA 492 CG10391-PA 1..492 1..492 2542 100 Plus
Cyp6d4-PA 515 CG12800-PA 5..510 3..484 659 30 Plus
Cyp6d5-PA 508 CG3050-PA 4..478 3..453 639 29.6 Plus
Cyp6d2-PA 512 CG4373-PA 1..512 1..485 589 28.4 Plus
Cyp6a22-PC 499 CG10240-PC 7..464 5..453 431 26.3 Plus