Clone Sequence Records
BO09329.3prime Sequence
913 bp (809 high quality bases) assembled on 2006-01-18
> BO09329.3prime
ATGGTCTAGAAAGCTTGCGCAGCCCACCAGCTTCTCAAAGATACCGCCAC
GCTTCCAGCCGCCATTGAATCCACCTGAGAAGCCGCTATTGGAACCGCCA
TTGTAGCCACCGTTGTAGCCACCGTTGTATCCACCGTTGTAGCCACCGTT
GTATCCACCAGCGGAAGCGGCAGCGGAGGAGGAAGCACTGGAGTAGCTGG
ACTCCACCGCTGGTGGTCCGTAAACCTGGGCGGGTGCACGATCCTCATCG
ACGATCAGCTTGATGGTCTTCACCACCTGTTGGCTCTGTGGCTGCGGGGC
GTAGGACACGGGAGCAGGGGCGTAGCTGATGGGAGCTGGAGCTGGGGCTG
AGTAACGCACCACTGGAACTGGAGCAGGAGCGGAGTAGGTTACAGCAGGA
GCGGGACCGGAGTAGGTCACAGCGGGAGCGGGAGCGGAGTAGGTAACAGC
GGGAGCGGGAGCGGAGTAGGTAACAGCGGGAGCAGCCTGTACTCGCACCA
CAGGAGCGGGGGCAGGAGCGGAGTAGGTCACAGCTGGAGCAGGAGCAGGA
GCGGAGTAGGTCACAGCTGGAGCAGGAGCAGGAGCGGAGTAGGTCACAGC
TGGAGCGGCCTGAACGCGCACCACCGGAGCTGGAGCAGAGTAGGTCACAG
CTGGGGCAGGAGCAGGAGCGGAGTAGGTCACAGCGGGAGCTGGGGCAGAG
TAGCTCACAGCGGGTGCAGGAGCGGAATAGGTCACAGCGGGAGCTGGAGC
AGAGTAGCTCACAGAGGGAGCGGAGTATGAGTTGGCGCTGGCGCTGGACG
AGGCACTGGACGAGTATCCTCCATAGTTGCCACCATAGCCAGAGGACCGT
CCGTAAGAGTAAGAGGGCTGCTCCACCCCCTTGATGACCTTGATGACCTG
CTCGCCACCACCG
BO09329.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:39:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-PA | 1230 | CG32564-RA | 333..1227 | 913..19 | 4450 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-RA | 1448 | CG32564-RA | 401..1295 | 913..19 | 4460 | 99.9 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 550..809 | 650..394 | 400 | 78.7 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 664..920 | 764..505 | 400 | 78.7 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 543..688 | 483..338 | 340 | 82.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 831..976 | 771..626 | 340 | 82.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 649..943 | 752..425 | 305 | 75.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 570..688 | 483..371 | 285 | 83.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 831..943 | 744..626 | 285 | 83.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 856..943 | 773..686 | 215 | 83 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 595..688 | 485..398 | 195 | 81.9 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 829..916 | 719..626 | 195 | 81.9 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 462..525 | 690..627 | 185 | 85.9 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 310..375 | 575..510 | 180 | 84.8 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 385..450 | 575..510 | 180 | 84.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:58:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17206807..17207701 | 913..19 | 4460 | 99.9 | Minus |
| X | 23542271 | X | 17206949..17207094 | 483..338 | 340 | 82.2 | Minus |
| X | 23542271 | X | 17207237..17207382 | 771..626 | 340 | 82.2 | Minus |
| X | 23542271 | X | 17207139..17207272 | 698..571 | 335 | 85.1 | Minus |
| X | 23542271 | X | 17207114..17207184 | 573..503 | 325 | 97.2 | Minus |
| X | 23542271 | X | 17206976..17207064 | 483..395 | 280 | 87.6 | Minus |
| X | 23542271 | X | 17207237..17207325 | 744..656 | 280 | 87.6 | Minus |
| X | 23542271 | X | 17207114..17207178 | 690..626 | 265 | 93.8 | Minus |
| X | 23542271 | X | 17206952..17207004 | 714..662 | 220 | 94.3 | Minus |
| X | 23542271 | X | 17207006..17207058 | 768..716 | 220 | 94.3 | Minus |
| X | 23542271 | X | 17207237..17207295 | 429..371 | 220 | 91.5 | Minus |
| X | 23542271 | X | 17207262..17207349 | 773..686 | 215 | 83 | Minus |
| X | 23542271 | X | 17207235..17207295 | 719..659 | 185 | 86.9 | Minus |
| 3L | 28110227 | 3L | 4483335..4483398 | 690..627 | 185 | 85.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:58:51 has no hits.
BO09329.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:07:46 Download gff for
BO09329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-PA | 333..1230 | 18..913 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:10:30 Download gff for
BO09329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-PA | 333..1230 | 18..913 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:58:31 Download gff for
BO09329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 401..1295 | 19..913 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:03:41 Download gff for
BO09329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 401..1295 | 19..913 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:03:41 Download gff for
BO09329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17206807..17207701 | 19..913 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:58:31 Download gff for
BO09329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17100840..17101734 | 19..913 | 99 | | Minus |
BO09329.5prime Sequence
896 bp (885 high quality bases) assembled on 2006-01-18
> BO09329.5prime
GAAGTTATCAGTCGACATGAAGCTGTACGTTTGCGTTTCGCTGGCCCTTT
TGGCCCTTTCGGCACCAGTTCCTTCCGATGCCCTGTTGGGCGCCAAATTG
GCCCTGCTCAAGGCCATTGGCGGCGGTCTGGGTGGCGGCAGCTCCGGCGG
CGGTGGCTACTCCACCGGCAGTGGTGGCTATGGAGGCGGCTATGGCAGCG
GTGGATACTCCGGCGGCTACAATCAGGGATATTACAACCAGCCCAGCAGA
CCGGTGTACAACTCCGAATACGGCAGTTCCTCATCCTCTTCCGCCAGCAG
CAGCAGCAGCTATGGAGGCAGCTATGGCGGTGGTTATGGCGGCGGCTACG
GTGGTGGCGAGCAGGTCATCAAGGTCATCAAGGTGGTGGAGCAGCCCTCT
TACTCTTACGGACGGTCCTCTGGCTATGGTGGCAACTATGGAGGATACTC
GTCCAGTGCCTCGTCCAGCGCCAGCGCCAACTCATACTCCGCTCCCTCTG
TGAGCTACTCTGCTCCAGCTCCCGCTGTGACCTATTCCGCTCCTGCACCC
GCTGTGAGCTACTCTGCCCCAGCTCCCGCTGTGACCTACTCCGCTCCTGC
TCCTGCCCCAGCTGTGACCTACTCTGCTCCAGCTCCGGTGGTGCGCGTTC
AGGCCGCTCCAGCTGTGACCTACTCCGCTCCTGCTCCTGCTCCAGCTGTG
ACCTACTCCGCTCCTGCTCCTGCTCCAGCTGTGACCTACTCCGCTCCTGC
CCCCGCTCCTGTGGTGCGAGTACAGGCTGCTCCCGCTGTTACCTACTCCG
CTCCCGCTCCCGCTGTTACCTACTCCGCTCCCGCTCCCGCTGTGACCTAC
TCCGGTCCCGCTCCTGCTGTAACCTACTCCGCTCCTGCTCCAGTTC
BO09329.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:39:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-PA | 1230 | CG32564-RA | 1..880 | 17..896 | 4400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:29:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-RA | 1448 | CG32564-RA | 67..948 | 15..896 | 4410 | 100 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 546..916 | 548..891 | 485 | 77.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 600..943 | 494..864 | 485 | 77.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 550..809 | 612..868 | 400 | 78.7 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 664..920 | 498..757 | 400 | 78.7 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..976 | 491..636 | 340 | 82.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 543..655 | 779..891 | 325 | 85.8 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 649..943 | 510..837 | 305 | 75.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 570..688 | 779..891 | 285 | 83.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..943 | 518..636 | 285 | 83.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 856..943 | 489..576 | 215 | 83 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 595..688 | 777..864 | 195 | 81.9 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 829..916 | 543..636 | 195 | 81.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 462..525 | 572..635 | 185 | 85.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 310..375 | 687..752 | 180 | 84.8 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 385..450 | 687..752 | 180 | 84.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:29:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17206473..17207354 | 15..896 | 4410 | 100 | Plus |
| X | 23542271 | X | 17207237..17207382 | 491..636 | 340 | 82.2 | Plus |
| X | 23542271 | X | 17207139..17207272 | 564..691 | 335 | 85.1 | Plus |
| X | 23542271 | X | 17207114..17207184 | 689..759 | 325 | 97.2 | Plus |
| X | 23542271 | X | 17206949..17207061 | 779..891 | 325 | 85.8 | Plus |
| X | 23542271 | X | 17206976..17207064 | 779..867 | 280 | 87.6 | Plus |
| X | 23542271 | X | 17207237..17207325 | 518..606 | 280 | 87.6 | Plus |
| X | 23542271 | X | 17207114..17207178 | 572..636 | 265 | 93.8 | Plus |
| X | 23542271 | X | 17206952..17207004 | 548..600 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207006..17207058 | 494..546 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207237..17207295 | 833..891 | 220 | 91.5 | Plus |
| X | 23542271 | X | 17207262..17207349 | 489..576 | 215 | 83 | Plus |
| X | 23542271 | X | 17207235..17207295 | 543..603 | 185 | 86.9 | Plus |
| 3L | 28110227 | 3L | 4483335..4483398 | 572..635 | 185 | 85.9 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:29:44 has no hits.
BO09329.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:07:47 Download gff for
BO09329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-PA | 1..880 | 17..896 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:10:32 Download gff for
BO09329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-PA | 1..880 | 17..896 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:14:34 Download gff for
BO09329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 60..948 | 3..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:07:56 Download gff for
BO09329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 60..948 | 3..896 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:07:56 Download gff for
BO09329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17206466..17207354 | 3..896 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:14:34 Download gff for
BO09329.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17100499..17101387 | 3..896 | 99 | | Plus |
BO09329.complete Sequence
1261 bp (1261 high quality bases) assembled on 2006-01-25
GenBank Submission: FJ631475
> BO09329.complete
GAAGTTATCAGTCGACATGAAGCTGTACGTTTGCGTTTCGCTGGCCCTTT
TGGCCCTTTCGGCACCAGTTCCTTCCGATGCCCTGTTGGGCGCCAAATTG
GCCCTGCTCAAGGCCATTGGCGGCGGTCTGGGTGGCGGCAGCTCCGGCGG
CGGTGGCTACTCCACCGGCAGTGGTGGCTATGGAGGCGGCTATGGCAGCG
GTGGATACTCCGGCGGCTACAATCAGGGATATTACAACCAGCCCAGCAGA
CCGGTGTACAACTCCGAATACGGCAGTTCCTCATCCTCTTCCGCCAGCAG
CAGCAGCAGCTATGGAGGCAGCTATGGCGGTGGTTATGGCGGCGGCTACG
GTGGTGGCGAGCAGGTCATCAAGGTCATCAAGGTGGTGGAGCAGCCCTCT
TACTCTTACGGACGGTCCTCTGGCTATGGTGGCAACTATGGAGGATACTC
GTCCAGTGCCTCGTCCAGCGCCAGCGCCAACTCATACTCCGCTCCCTCTG
TGAGCTACTCTGCTCCAGCTCCCGCTGTGACCTATTCCGCTCCTGCACCC
GCTGTGAGCTACTCTGCCCCAGCTCCCGCTGTGACCTACTCCGCTCCTGC
TCCTGCCCCAGCTGTGACCTACTCTGCTCCAGCTCCGGTGGTGCGCGTTC
AGGCCGCTCCAGCTGTGACCTACTCCGCTCCTGCTCCTGCTCCAGCTGTG
ACCTACTCCGCTCCTGCTCCTGCTCCAGCTGTGACCTACTCCGCTCCTGC
CCCCGCTCCTGTGGTGCGAGTACAGGCTGCTCCCGCTGTTACCTACTCCG
CTCCCGCTCCCGCTGTTACCTACTCCGCTCCCGCTCCCGCTGTGACCTAC
TCCGGTCCCGCTCCTGCTGTAACCTACTCCGCTCCTGCTCCAGTTCCAGT
GGTGCGTTACTCAGCCCCAGCTCCAGCTCCCATCAGCTACGCCCCTGCTC
CCGTGTCCTACGCCCCGCAGCCACAGAGCCAACAGGTGGTGAAGACCATC
AAGCTGATCGTCGATGAGGATCGTGCACCCGCCCAGGTTTACGGACCACC
AGCGGTGGAGTCCAGCTACTCCAGTGCTTCCTCCTCCGCTGCCGCTTCCG
CTGGTGGATACAACGGTGGCTACAACGGTGGATACAACGGTGGCTACAAC
GGTGGCTACAATGGCGGTTCCAATAGCGGCTTCTCAGGTGGATTCAATGG
CGGCTGGAAGCGTGGCGGTATCTTTGAGAAGCTGGTGGGCTGCGCAAGCT
TTCTAGACCAT
BO09329.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-RA | 1230 | CG32564-PA | 1..1227 | 17..1243 | 6135 | 100 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 475..620 | 779..924 | 340 | 82.2 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 763..908 | 491..636 | 340 | 82.2 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 665..798 | 564..691 | 335 | 85.1 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 640..710 | 689..759 | 325 | 97.2 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 502..590 | 779..867 | 280 | 87.6 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 763..851 | 518..606 | 280 | 87.6 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 640..704 | 572..636 | 265 | 93.8 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 478..530 | 548..600 | 220 | 94.3 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 532..584 | 494..546 | 220 | 94.3 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 763..821 | 833..891 | 220 | 91.5 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 788..875 | 489..576 | 215 | 83 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 761..821 | 543..603 | 185 | 86.9 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 427..490 | 572..635 | 185 | 85.9 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 275..340 | 687..752 | 180 | 84.8 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 350..415 | 687..752 | 180 | 84.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:09:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-RA | 1448 | CG32564-RA | 67..1295 | 15..1243 | 6145 | 100 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 543..688 | 779..924 | 340 | 82.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..976 | 491..636 | 340 | 82.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 733..866 | 564..691 | 335 | 85.1 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 708..778 | 689..759 | 325 | 97.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 570..658 | 779..867 | 280 | 87.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..919 | 518..606 | 280 | 87.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 708..772 | 572..636 | 265 | 93.8 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 546..598 | 548..600 | 220 | 94.3 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 600..652 | 494..546 | 220 | 94.3 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..889 | 833..891 | 220 | 91.5 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 856..943 | 489..576 | 215 | 83 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 829..889 | 543..603 | 185 | 86.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 462..525 | 572..635 | 185 | 85.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 310..375 | 687..752 | 180 | 84.8 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 385..450 | 687..752 | 180 | 84.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:09:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17206473..17207701 | 15..1243 | 6145 | 100 | Plus |
| X | 23542271 | X | 17206949..17207094 | 779..924 | 340 | 82.2 | Plus |
| X | 23542271 | X | 17207237..17207382 | 491..636 | 340 | 82.2 | Plus |
| X | 23542271 | X | 17207139..17207272 | 564..691 | 335 | 85.1 | Plus |
| X | 23542271 | X | 17207114..17207184 | 689..759 | 325 | 97.2 | Plus |
| X | 23542271 | X | 17206976..17207064 | 779..867 | 280 | 87.6 | Plus |
| X | 23542271 | X | 17207237..17207325 | 518..606 | 280 | 87.6 | Plus |
| X | 23542271 | X | 17207114..17207178 | 572..636 | 265 | 93.8 | Plus |
| X | 23542271 | X | 17206952..17207004 | 548..600 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207006..17207058 | 494..546 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207237..17207295 | 833..891 | 220 | 91.5 | Plus |
| X | 23542271 | X | 17207262..17207349 | 489..576 | 215 | 83 | Plus |
| X | 23542271 | X | 17207235..17207295 | 543..603 | 185 | 86.9 | Plus |
| 3L | 28110227 | 3L | 4483335..4483398 | 572..635 | 185 | 85.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:09:09 has no hits.
BO09329.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:06:58 Download gff for
BO09329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 1..1230 | 17..1244 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:26:40 Download gff for
BO09329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 47..1282 | 3..1243 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:47 Download gff for
BO09329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 69..1295 | 17..1245 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:06:58 Download gff for
BO09329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 47..1282 | 3..1243 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:27 Download gff for
BO09329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 69..1295 | 17..1245 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:27 Download gff for
BO09329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17206475..17207701 | 17..1245 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:47 Download gff for
BO09329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17100508..17101734 | 17..1245 | 99 | | Plus |
BO09329.pep Sequence
Translation from 16 to 1261
> BO09329.pep
MKLYVCVSLALLALSAPVPSDALLGAKLALLKAIGGGLGGGSSGGGGYST
GSGGYGGGYGSGGYSGGYNQGYYNQPSRPVYNSEYGSSSSSSASSSSSYG
GSYGGGYGGGYGGGEQVIKVIKVVEQPSYSYGRSSGYGGNYGGYSSSASS
SASANSYSAPSVSYSAPAPAVTYSAPAPAVSYSAPAPAVTYSAPAPAPAV
TYSAPAPVVRVQAAPAVTYSAPAPAPAVTYSAPAPAPAVTYSAPAPAPVV
RVQAAPAVTYSAPAPAVTYSAPAPAVTYSGPAPAVTYSAPAPVPVVRYSA
PAPAPISYAPAPVSYAPQPQSQQVVKTIKLIVDEDRAPAQVYGPPAVESS
YSSASSSAAASAGGYNGGYNGGYNGGYNGGYNGGSNSGFSGGFNGGWKRG
GIFEKLVGCASFLDH
BO09329.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:41:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-PA | 409 | CG32564-PA | 1..409 | 1..409 | 2128 | 100 | Plus |
| CG2962-PA | 376 | CG2962-PA | 1..374 | 1..345 | 466 | 37 | Plus |
| CG31626-PB | 285 | CG31626-PB | 55..274 | 147..351 | 438 | 51.5 | Plus |
| CG31626-PA | 285 | CG31626-PA | 55..274 | 147..351 | 438 | 51.5 | Plus |
| CG31626-PB | 285 | CG31626-PB | 25..266 | 153..362 | 435 | 49.6 | Plus |
| CG31626-PA | 285 | CG31626-PA | 25..266 | 153..362 | 435 | 49.6 | Plus |
| CG11584-PB | 662 | CG11584-PB | 204..468 | 144..353 | 367 | 46 | Plus |
| CG31626-PB | 285 | CG31626-PB | 125..280 | 149..282 | 322 | 51.8 | Plus |
| CG31626-PA | 285 | CG31626-PA | 125..280 | 149..282 | 322 | 51.8 | Plus |
| CG31626-PB | 285 | CG31626-PB | 142..280 | 148..273 | 284 | 53 | Plus |
| CG31626-PA | 285 | CG31626-PA | 142..280 | 148..273 | 284 | 53 | Plus |
| CG31626-PB | 285 | CG31626-PB | 193..280 | 147..245 | 201 | 53 | Plus |
| CG31626-PA | 285 | CG31626-PA | 193..280 | 147..245 | 201 | 53 | Plus |
