Clone BO09363 Report

Search the DGRC for BO09363

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:93
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG17260-RA
Protein status:BO09363.pep: validated full length
Sequenced Size:1126

Clone Sequence Records

BO09363.3prime Sequence

790 bp (789 high quality bases) assembled on 2006-01-18

> BO09363.3prime
ATGGTCTAGAAAGCTTGCTTGCAGAAAGTCGACCACCTCCTCCAGTTCTC
TTTGGCGAGCCTGTTTCTGGGCCCAGCGCGCCTCTGCGGTCTTTACGCTG
ACCACCCACCGATCGTGAGCCAGCTTGATGCCGCACACAGTGTCCTCCGG
AGTTTTGGAAACGGTGGCTCCTCCTCCCTGTGACCTGCCCATATAGGTCT
GGGCATCGGAACGAGGATGGCGACGCGCGGCGGGACATAATTTGCCACCC
TTTGGAAACGGAGGCTCCGATAGGTATTTCTTAAGGCAGCCTTGGTGAAA
GAGATGACCACAGTAGACGCGCTCGATGAAGAAGTCGGCATTGTCATCCG
TTTCTATGTCCTCTGGGTATTCGGGTAGCACGGTACTATCACATATGGGA
CAACGCTCGGTGTGAAAGTCCCGGGTGGCTTCCAGGCAGAATTTCAGCGA
GCGTTGCAGACTCCTAACAGGCCGAAAATTGGCTAGAGCCTCCTTGCTCA
TACGGATCGGTGGCTCCACGCACTGCCGGGCTATTTCCTTTGACTGGCCG
TTTAGGTAACGCACGAGCACGGCTGGGAGATTGGAATCTTGACCGCGCAG
CTCCACACTCTGCATGGGATAGCTGTCCGGAACAACAGCGATTACTCTGT
AGGTGTAGCGTCCGCCCTTGGCGACCAGCTCCACGCTTTTGTTCTTCTGC
TTCAGCTTCAACTGGCTCTCCGTGCCTCCAGTCTTGATGTCCGCTCTCAG
CTGCTTGATCTCCTCCAAGCACACGCACAGCGGATTATCA

BO09363.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG17260-PA 1095 CG17260-RA 321..1092 790..19 3860 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 08:53:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG17260-RB 1288 CG17260-RB 409..1180 790..19 3860 100 Minus
CG17260-RC 1306 CG17260-RC 427..1198 790..19 3860 100 Minus
CG17260-RA 1383 CG17260-RA 504..1275 790..19 3860 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 08:53:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3037914..3038685 790..19 3860 100 Minus
Blast to na_te.dros performed on 2015-02-03 08:53:10 has no hits.

BO09363.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:08:45 Download gff for BO09363.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17260-PA 322..1095 15..789 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:11:53 Download gff for BO09363.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17260-PA 322..1095 15..789 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:42:28 Download gff for BO09363.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17260-RA 505..1278 15..789 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:56:40 Download gff for BO09363.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17260-RA 505..1278 15..789 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:56:40 Download gff for BO09363.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 3037915..3038688 15..789 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:42:28 Download gff for BO09363.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3037915..3038688 15..789 99   Minus

BO09363.5prime Sequence

865 bp (829 high quality bases) assembled on 2006-01-18

> BO09363.5prime
GAAGTTATCAGTCGACATGAGCTTTATTGACCAGGAAGTCACGGAGTTCC
GAGCAAAATGTGAGAAGCAGGTGCCGCACACGAAGATCATTATTTGCTCC
AACTCGCTGATCCGGGTTGACATATACCCGGAGCGGCCGAATCGCTCGAT
GACTATGTGCCTTCGATTTCCAGAAAACTACCCGCAGAGCACCCAAATTC
TGGTGGAGCTGAAGAGTCGTGTGTACTCCGAAATGCTTCTGACGGAGCTT
ACCCGGCTGATCGACGACTATGCCAGGGATTTCATCGGGAAGCCACAGGC
ATTGCAAGTGCTGGCCTTCGCCCAACAGTATTTAACTGATAATCCGCTGT
GCGTGTGCTTGGAGGAGATCAAGCAGCTGAGAGCGGACATCAAGACTGGA
GGCACGGAGAGCCAGTTGAAGCTGAAGCAGAAGAACAAAAGCGTGGAGCT
GGTCGCCAAGGGCGGACGCTACACCTACAGAGTAATCGCTGTTGTTCCGG
ACAGCTATCCCATGCAGAGTGTGGAGCTGCGCGGTCAAGATTCCAATCTC
CCAGCCGTGCTCGTGCGTTACCTAAACGGCCAGTCAAAGGAAATAGCCCG
GCAGTGCGTGGAGCCACCGATCCGTATGAGCAAGGAGGCTCTAGCCAATT
TTCGGCCTGTTAGGAGTCTGCAACGCTCGCTGAAATTCTGCCTGGAAGCC
ACCCGGGACTTTCACACCGAGCGTTGTCCCATATGTGATAGTACCGTGCT
ACCCGAATACCCAGAGGACATAGAAACGGATGACAATGCCGACTTCTTCA
TCGAGCGCGTCTACTGTGGTCATCTCTTTCACCANGGCTGCCTTAAGAAA
TACCTATCGGAGCCT

BO09363.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG17260-PA 1095 CG17260-RA 1..849 17..865 4226 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:49:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG17260-RB 1288 CG17260-RB 89..937 17..865 4234 99.9 Plus
CG17260-RC 1306 CG17260-RC 107..955 17..865 4234 99.9 Plus
CG17260-RA 1383 CG17260-RA 184..1032 17..865 4234 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:49:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3037594..3038442 17..865 4234 99.9 Plus
Blast to na_te.dros performed on 2015-02-13 02:49:37 has no hits.

BO09363.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:08:46 Download gff for BO09363.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17260-PA 1..849 17..865 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:11:55 Download gff for BO09363.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17260-PA 1..849 17..865 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:17:50 Download gff for BO09363.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17260-RA 178..1032 8..865 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:07:20 Download gff for BO09363.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17260-RA 178..1032 8..865 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:07:20 Download gff for BO09363.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3037588..3038442 8..865 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:17:50 Download gff for BO09363.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3037588..3038442 8..865 99   Plus

BO09363.complete Sequence

1126 bp (1126 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ631482

> BO09363.complete
GAAGTTATCAGTCGACATGAGCTTTATTGACCAGGAAGTCACGGAGTTCC
GAGCAAAATGTGAGAAGCAGGTGCCGCACACGAAGATCATTATTTGCTCC
AACTCGCTGATCCGGGTTGACATATACCCGGAGCGGCCGAATCGCTCGAT
GACTATGTGCCTTCGATTTCCAGAAAACTACCCGCAGAGCACCCAAATTC
TGGTGGAGCTGAAGAGTCGTGTGTACTCCGAAATGCTTCTGACGGAGCTT
ACCCGGCTGATCGACGACTATGCCAGGGATTTCATCGGGAAGCCACAGGC
ATTGCAAGTGCTGGCCTTCGCCCAACAGTATTTAACTGATAATCCGCTGT
GCGTGTGCTTGGAGGAGATCAAGCAGCTGAGAGCGGACATCAAGACTGGA
GGCACGGAGAGCCAGTTGAAGCTGAAGCAGAAGAACAAAAGCGTGGAGCT
GGTCGCCAAGGGCGGACGCTACACCTACAGAGTAATCGCTGTTGTTCCGG
ACAGCTATCCCATGCAGAGTGTGGAGCTGCGCGGTCAAGATTCCAATCTC
CCAGCCGTGCTCGTGCGTTACCTAAACGGCCAGTCAAAGGAAATAGCCCG
GCAGTGCGTGGAGCCACCGATCCGTATGAGCAAGGAGGCTCTAGCCAATT
TTCGGCCTGTTAGGAGTCTGCAACGCTCGCTGAAATTCTGCCTGGAAGCC
ACCCGGGACTTTCACACCGAGCGTTGTCCCATATGTGATAGTACCGTGCT
ACCCGAATACCCAGAGGACATAGAAACGGATGACAATGCCGACTTCTTCA
TCGAGCGCGTCTACTGTGGTCATCTCTTTCACCAAGGCTGCCTTAAGAAA
TACCTATCGGAGCCTCCGTTTCCAAAGGGTGGCAAATTATGTCCCGCCGC
GCGTCGCCATCCTCGTTCCGATGCCCAGACCTATATGGGCAGGTCACAGG
GAGGAGGAGCCACCGTTTCCAAAACTCCGGAGGACACTGTGTGCGGCATC
AAGCTGGCTCACGATCGGTGGGTGGTCAGCGTAAAGACCGCAGAGGCGCG
CTGGGCCCAGAAACAGGCTCGCCAAAGAGAACTGGAGGAGGTGGTCGACT
TTCTGCAAGCAAGCTTTCTAGACCAT

BO09363.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:58:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17260-RB 1095 CG17260-PB 1..1092 17..1108 5460 100 Plus
CG17260-RC 1095 CG17260-PC 1..1092 17..1108 5460 100 Plus
CG17260-RA 1095 CG17260-PA 1..1092 17..1108 5460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:58:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG17260-RB 1288 CG17260-RB 89..1180 17..1108 5460 100 Plus
CG17260-RC 1306 CG17260-RC 107..1198 17..1108 5460 100 Plus
CG17260-RA 1383 CG17260-RA 184..1275 17..1108 5460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:58:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3037594..3038685 17..1108 5460 100 Plus
Blast to na_te.dros performed on 2014-11-27 12:58:14 has no hits.

BO09363.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:06:49 Download gff for BO09363.complete
Subject Subject Range Query Range Percent Splice Strand
CG17260-RA 1..1095 17..1112 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:26:27 Download gff for BO09363.complete
Subject Subject Range Query Range Percent Splice Strand
CG17260-RA 178..1278 8..1112 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:47:28 Download gff for BO09363.complete
Subject Subject Range Query Range Percent Splice Strand
CG17260-RA 184..1275 17..1110 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:06:49 Download gff for BO09363.complete
Subject Subject Range Query Range Percent Splice Strand
CG17260-RA 178..1278 8..1112 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:20 Download gff for BO09363.complete
Subject Subject Range Query Range Percent Splice Strand
CG17260-RA 184..1275 17..1110 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:20 Download gff for BO09363.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3037594..3038685 17..1110 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:47:28 Download gff for BO09363.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3037594..3038685 17..1110 99   Plus

BO09363.pep Sequence

Translation from 16 to 1126

> BO09363.pep
MSFIDQEVTEFRAKCEKQVPHTKIIICSNSLIRVDIYPERPNRSMTMCLR
FPENYPQSTQILVELKSRVYSEMLLTELTRLIDDYARDFIGKPQALQVLA
FAQQYLTDNPLCVCLEEIKQLRADIKTGGTESQLKLKQKNKSVELVAKGG
RYTYRVIAVVPDSYPMQSVELRGQDSNLPAVLVRYLNGQSKEIARQCVEP
PIRMSKEALANFRPVRSLQRSLKFCLEATRDFHTERCPICDSTVLPEYPE
DIETDDNADFFIERVYCGHLFHQGCLKKYLSEPPFPKGGKLCPAARRHPR
SDAQTYMGRSQGGGATVSKTPEDTVCGIKLAHDRWVVSVKTAEARWAQKQ
ARQRELEEVVDFLQASFLDH

BO09363.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:41:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG17260-PB 364 CG17260-PB 1..364 1..364 1907 100 Plus
CG17260-PC 364 CG17260-PC 1..364 1..364 1907 100 Plus
CG17260-PA 364 CG17260-PA 1..364 1..364 1907 100 Plus