Clone BO09433 Report

Search the DGRC for BO09433

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:94
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptFKBP59-RA
Protein status:BO09433.pep: validated full length
Sequenced Size:1351

Clone Sequence Records

BO09433.3prime Sequence

837 bp (836 high quality bases) assembled on 2006-01-23

> BO09433.3prime
ATGGTCTAGAAAGCTTGCGATCATGATTATATTGTCGCGCTCCAGCGTCA
ATTCTGCTTCGCGCTTGGCATCCTCTTCAGACCACTCTCCGCACTTGCTC
AGCACGTCAGTTTCCCGCGGAGGTTCGGTCTCTTTGTCGTTGGCAGCCAG
TTTGGTGAACATGTTGGCATAGAGTTTCTTCTCCTTGTTCTTGCTCTCTT
TGAGTTTCTGCTTGCAGATGATCACTTGGTTGGCAGCCGCTTTGTTACCA
GGCTCCAATTGGATGACCTTTTGGAAGTCCTCTAGTGCATCTTCCAGCTC
ATTGATAGTCAAGTTGCATTGGCCACGACGGTAGAGAGCCTTTACATTGT
TCTTATCCAAAGCCAAAACCTCATTACACTCCTGCTTGGCTTCGAAGTGA
TCGTTGGACTTTTGGTGGCACAGAGCAATGTTGCTGTGCGTGGCCACCTT
AATCTTCTTCACCTCCTCATTGGTATGGACAGTGGTGGGCAAAATGTTCT
TGCACTTGGTGTACATCTTAATGGCTAGAGCCCAGTTCTCCTTCTTAAAG
TAGTTGGTGCCCTTCTCCTTGTACACCTTGGCCTCAGCCAGGCGCTCCTC
GTCGCTCAGTTTCCACTCCTCCAGTCCCTTGCCGCAGTCGACGAGCTTTA
CTGTGTACTCCACTGTGGCATTTGGTGGAATCTTAAACTCCTCATTGCCC
TTTGCTCCAAATGCATACTTGGCCTGGATCTTGATTCTGGAGGTCTCGCC
TACGTTCATCTTCTCCAGGGCAATTTCGACACCATCGATAATGCCGATGG
CCTTACCCTCGCCATAATCAAACTCCACATCGCGATC

BO09433.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:42:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG4535-PA 1320 FKBP59-RA 499..1317 837..19 4070 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:48:05
Subject Length Description Subject Range Query Range Score Percent Strand
FKBP59-RB 1587 CG4535-RB 637..1455 837..19 4080 99.9 Minus
FKBP59-RA 1494 CG4535-RA 544..1362 837..19 4080 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9889046..9889405 738..379 1800 100 Minus
2L 23513712 2L 9889630..9889769 269..130 685 99.3 Minus
2L 23513712 2L 9889458..9889572 380..266 575 100 Minus
2L 23513712 2L 9889875..9889987 131..19 565 100 Minus
2L 23513712 2L 9888885..9888985 837..737 505 100 Minus
Blast to na_te.dros performed 2015-02-12 03:48:04
Subject Length Description Subject Range Query Range Score Percent Strand
Doc3-element 4740 Doc3-element DOC3 4740bp 1157..1223 186..120 110 62.7 Minus

BO09433.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:10:32 Download gff for BO09433.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4535-PA 499..1320 15..837 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:14:20 Download gff for BO09433.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4535-PA 499..1320 15..837 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:43:05 Download gff for BO09433.3prime
Subject Subject Range Query Range Percent Splice Strand
FKBP59-RA 544..1367 11..837 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:52:04 Download gff for BO09433.3prime
Subject Subject Range Query Range Percent Splice Strand
FKBP59-RA 544..1367 11..837 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:52:04 Download gff for BO09433.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 9888885..9888985 737..837 100 -> Minus
2L 9889048..9889405 379..736 100 -> Minus
2L 9889460..9889570 268..378 100 -> Minus
2L 9889632..9889769 130..267 99 -> Minus
2L 9889877..9889992 11..129 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:43:05 Download gff for BO09433.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9888885..9888985 737..837 100 -> Minus
arm_2L 9889048..9889405 379..736 100 -> Minus
arm_2L 9889460..9889570 268..378 100 -> Minus
arm_2L 9889632..9889769 130..267 99 -> Minus
arm_2L 9889877..9889992 11..129 96   Minus

BO09433.5prime Sequence

894 bp (786 high quality bases) assembled on 2006-01-23

> BO09433.5prime
GAAGTTATCAGTCGACATGCCGGAAGGGAATAAAATCGACTTGTCCGGGG
ACGGTGGCGTCCTAAAGGAGATCCTGAAAGAGGGCACGGGCACAGAGACG
CCGCACAGCGGATGCACTGTGTCCCTGCACTATACGGGTCGCCTGGTCGA
TGGCACGGAATTCGATTCCAGCCTCAGTCGCAATGAGCCCTTCGAATTTT
CGCTCGGCAAAGGCAATGTGATCAAGGCCTTCGACATGGGAGTTGCCACC
ATGAAGCTCGGCGAGCGCTGCTTCCTAACATGTGCTCCAAACTACGCTTA
CGGAGCTGCCGGCAGCCCGCCAGCCATTCCGCCGGATGCTACTCTGATTT
TTGAGCTGGAGATGCTCGGCTGGAAGGGCGAGGATTTGAGTCCCAACCAG
GACGGAAGTATTGACCGCACCATTTTGGAAGCCAGCGATAAAAAGCGCAC
TCCCAGCGATGGCGCCTTTGTCAAGGCTCACATTTCTGGTAGTTTCGAGG
GCCGCGTGTTTGAGGATCGCGATGTGGAGTTTGATTATGGCGAGGGTAAG
GCCATCGGCATTATCGATGGTGTCGAAATTGCCCTGGAGAAGATGAACGT
AGGCGAGACCTCCAGAATCAAGATCCAGGCCAAGTATGCATTTGGAGCAA
AGGGCAATGAGGAGTTTAAGATTCCACCAAATGCCACAGTGGAGTACACA
GTAAAGCTCGTCGACTGCGGCAAGGGACTGGAGGAGTGGAAACTGAGCGA
CGAGGAGCGCCTGGCTGAGGCCAAGGTGTACAAGGAGAAGGGCACCAACT
ACTTTAAGAAGGAGAACTGGGCTCTAGCCATTAAGATGTACACCAAGTGC
AAGAACATTTTGCCCCACACTGTCCATACCAATGAAGAGGTGAA

BO09433.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:42:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG4535-PA 1320 FKBP59-RA 1..878 17..894 4315 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
FKBP59-RB 1587 CG4535-RB 139..1016 17..894 4345 99.7 Plus
FKBP59-RA 1494 CG4535-RA 46..923 17..894 4345 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9889046..9889326 614..894 1360 98.9 Plus
2L 23513712 2L 9888143..9888339 17..213 985 100 Plus
2L 23513712 2L 9888402..9888546 211..355 725 100 Plus
2L 23513712 2L 9888846..9888985 476..615 700 100 Plus
2L 23513712 2L 9888665..9888787 354..476 615 100 Plus
Blast to na_te.dros performed on 2015-02-10 23:25:10 has no hits.

BO09433.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:10:33 Download gff for BO09433.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4535-PA 1..876 17..892 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:14:21 Download gff for BO09433.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4535-PA 1..876 17..892 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:32:33 Download gff for BO09433.5prime
Subject Subject Range Query Range Percent Splice Strand
FKBP59-RA 37..923 9..894 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:48:14 Download gff for BO09433.5prime
Subject Subject Range Query Range Percent Splice Strand
FKBP59-RA 37..923 9..894 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:48:14 Download gff for BO09433.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9888134..9888338 9..212 98 -> Plus
2L 9888404..9888546 213..355 100 -> Plus
2L 9888667..9888787 356..476 100 -> Plus
2L 9888847..9888985 477..615 100 -> Plus
2L 9889048..9889326 616..894 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:32:33 Download gff for BO09433.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9888134..9888338 9..212 98 -> Plus
arm_2L 9888404..9888546 213..355 100 -> Plus
arm_2L 9888667..9888787 356..476 100 -> Plus
arm_2L 9888847..9888985 477..615 100 -> Plus
arm_2L 9889048..9889326 616..894 98   Plus

BO09433.complete Sequence

1351 bp assembled on 2007-10-17

GenBank Submission: FJ631502

> BO09433.complete
GAAGTTATCAGTCGACATGCCGGAAGGGAATAAAATCGACTTGTCCGGGG
ACGGTGGCGTCCTAAAGGAGATCCTGAAAGAGGGCACGGGCACAGAGACG
CCGCACAGCGGATGCACTGTGTCCCTGCACTATACGGGTCGCCTGGTCGA
TGGCACGGAATTCGATTCCAGCCTCAGTCGCAATGAGCCCTTCGAATTTT
CGCTCGGCAAAGGCAATGTGATCAAGGCCTTCGACATGGGAGTTGCCACC
ATGAAGCTCGGCGAGCGCTGCTTCCTAACATGTGCTCCAAACTACGCTTA
CGGAGCTGCCGGCAGCCCGCCAGCCATTCCGCCGGATGCTACTCTGATTT
TTGAGCTGGAGATGCTCGGCTGGAAGGGCGAGGATTTGAGTCCCAACCAG
GACGGAAGTATTGACCGCACCATTTTGGAAGCCAGCGATAAAAAGCGCAC
TCCCAGCGATGGCGCCTTTGTCAAGGCTCACATTTCTGGTAGTTTCGAGG
GCCGCGTGTTTGAGGATCGCGATGTGGAGTTTGATTATGGCGAGGGTAAG
GCCATCGGCATTATCGATGGTGTCGAAATTGCCCTGGAGAAGATGAACGT
AGGCGAGACCTCCAGAATCAAGATCCAGGCCAAGTATGCATTTGGAGCAA
AGGGCAATGAGGAGTTTAAGATTCCACCAAATGCCACAGTGGAGTACACA
GTAAAGCTCGTCGACTGCGGCAAGGGACTGGAGGAGTGGAAACTGAGCGA
CGAGGAGCGCCTGGCTGAGGCCAAGGTGTACAAGGAGAAGGGCACCAACT
ACTTTAAGAAGGAGAACTGGGCTCTAGCCATTAAGATGTACACCAAGTGC
AAGAACATTTTGCCCACCACTGTCCATACCAATGAGGAGGTGAAGAAGAT
TAAGGTGGCCACGCACAGCAACATTGCTCTGTGCCACCAAAAGTCCAACG
ATCACTTCGAAGCCAAGCAGGAGTGTAATGAGGTTTTGGCTTTGGATAAG
AACAATGTAAAGGCTCTCTACCGTCGTGGCCAATGCAACTTGACTATCAA
TGAGCTGGAAGATGCACTAGAGGACTTCCAAAAGGTCATCCAATTGGAGC
CTGGTAACAAAGCGGCTGCCAACCAAGTGATCATCTGCAAGCAGAAACTC
AAAGAGAGCAAGAACAAGGAGAAGAAACTCTATGCCAACATGTTCACCAA
ACTGGCTGCCAACGACAAAGAGACCGAACCTCCGCGGGAAACTGACGTGC
TGAGCAAGTGCGGAGAGTGGTCTGAAGAGGATGCCAAGCGCGAAGCAGAA
TTGACGCTGGAGCGCGACAATATAATCATGATCGCAAGCTTTCTAGACCA
T

BO09433.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
FKBP59-RB 1320 CG4535-PB 1..1317 17..1333 6570 99.9 Plus
FKBP59-RA 1320 CG4535-PA 1..1317 17..1333 6570 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
FKBP59-RB 1587 CG4535-RB 139..1455 17..1333 6570 99.9 Plus
FKBP59-RA 1494 CG4535-RA 46..1362 17..1333 6570 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:51:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9889046..9889405 614..973 1800 100 Plus
2L 23513712 2L 9888143..9888339 17..213 985 100 Plus
2L 23513712 2L 9888402..9888546 211..355 725 100 Plus
2L 23513712 2L 9888846..9888985 476..615 700 100 Plus
2L 23513712 2L 9889630..9889769 1083..1222 685 99.3 Plus
2L 23513712 2L 9888665..9888787 354..476 615 100 Plus
2L 23513712 2L 9889458..9889572 972..1086 575 100 Plus
2L 23513712 2L 9889875..9889987 1221..1333 565 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:51:42 has no hits.

BO09433.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:55:45 Download gff for BO09433.complete
Subject Subject Range Query Range Percent Splice Strand
FKBP59-RA 1..1320 17..1337 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:06:08 Download gff for BO09433.complete
Subject Subject Range Query Range Percent Splice Strand
FKBP59-RA 101..1431 9..1341 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:53 Download gff for BO09433.complete
Subject Subject Range Query Range Percent Splice Strand
FKBP59-RA 46..1362 17..1335 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:36:05 Download gff for BO09433.complete
Subject Subject Range Query Range Percent Splice Strand
FKBP59-RA 110..1426 17..1335 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:28:47 Download gff for BO09433.complete
Subject Subject Range Query Range Percent Splice Strand
FKBP59-RA 46..1362 17..1335 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:28:47 Download gff for BO09433.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9889877..9889987 1223..1335 98   Plus
2L 9889048..9889405 616..973 100 -> Plus
2L 9889460..9889570 974..1084 100 -> Plus
2L 9889632..9889769 1085..1222 99 -> Plus
2L 9888143..9888338 17..212 100 -> Plus
2L 9888404..9888546 213..355 100 -> Plus
2L 9888667..9888787 356..476 100 -> Plus
2L 9888847..9888985 477..615 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:53 Download gff for BO09433.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9888667..9888787 356..476 100 -> Plus
arm_2L 9888847..9888985 477..615 100 -> Plus
arm_2L 9888143..9888338 17..212 100 -> Plus
arm_2L 9888404..9888546 213..355 100 -> Plus
arm_2L 9889048..9889405 616..973 100 -> Plus
arm_2L 9889460..9889570 974..1084 100 -> Plus
arm_2L 9889632..9889769 1085..1222 99 -> Plus
arm_2L 9889877..9889987 1223..1335 98   Plus

BO09433.pep Sequence

Translation from 16 to 1351

> BO09433.pep
MPEGNKIDLSGDGGVLKEILKEGTGTETPHSGCTVSLHYTGRLVDGTEFD
SSLSRNEPFEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGS
PPAIPPDATLIFELEMLGWKGEDLSPNQDGSIDRTILEASDKKRTPSDGA
FVKAHISGSFEGRVFEDRDVEFDYGEGKAIGIIDGVEIALEKMNVGETSR
IKIQAKYAFGAKGNEEFKIPPNATVEYTVKLVDCGKGLEEWKLSDEERLA
EAKVYKEKGTNYFKKENWALAIKMYTKCKNILPTTVHTNEEVKKIKVATH
SNIALCHQKSNDHFEAKQECNEVLALDKNNVKALYRRGQCNLTINELEDA
LEDFQKVIQLEPGNKAAANQVIICKQKLKESKNKEKKLYANMFTKLAAND
KETEPPRETDVLSKCGEWSEEDAKREAELTLERDNIIMIASFLDH

BO09433.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
FKBP59-PB 439 CG4535-PB 1..439 1..439 2295 100 Plus
FKBP59-PA 439 CG4535-PA 1..439 1..439 2295 100 Plus
FK506-bp2-PA 108 CG11001-PA 2..105 14..117 283 50 Plus
CG5482-PD 397 CG5482-PD 67..359 132..403 239 25.1 Plus
CG5482-PC 397 CG5482-PC 67..359 132..403 239 25.1 Plus