Clone BO09565 Report

Search the DGRC for BO09565

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:95
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG32631-RA
Protein status:BO09565.pep: validated full length
Sequenced Size:970

Clone Sequence Records

BO09565.3prime Sequence

817 bp (791 high quality bases) assembled on 2006-01-23

> BO09565.3prime
ATGGTCTAGAAAGCTTGCGAACTGACCACTCAGCTCGTCGTCAAAATCGG
AGGTGGGTGGCGTGTCCTTGACATCCGCCCGCACCGTGTACTCCTTCTCG
TTGACACTGTAGTAGATGTTGAAGTACCTGCCCGACTGAATTCTCATGGC
AAGGTAGCCACTCTGGCCGCGATCCTTGGCCGTCCGCTGGTAGATCACAT
GTCCGCTGCTCAGGATTACGCGCACCTCCTGCGAACCGTCCTCGTTCTTC
CGCGCATTCTGCCGCATGATCTGCACCAGCTGCGTCCTCAGTGGATTGGA
ACTGGGCTTCAGGCCCGGCAGCTGAACGAGCGGCTCACAGCGGCAGTTGA
GCTTCTGGGTGAGTGGGCATGTGGTCTGGGGATTGGGTGACGAGCCGAGC
AGTTGGCCCGGCACCGCGGCCACCGGCGCCACTGCACCCAGTCCCAGGTT
GCCCAGATTCAGGCCGCCCAGAGTGCCGAAGCCGCCGTTTAGCGAACCGA
GTCCCAGGCCGTTGATCAAATTGGGCAGGCCACCCACCCAGGTTCCGATA
AGTGGAAGATTCTGGCTAAACTGAGGCAGCCAGCCGGACTGCGGCTGCTG
GCTCTGGGCATTCGAACTGGAGGCCACAGGAGTCACCACCGTAATCGGCT
GCAATGGCTGCAGAGGCTGAAGTTGCTGCAGTGGCGGCAGTGGCTGCAGC
GGGGGATTCACATTAAGGCCATCGAAGAAAACGGGATAGTTGCCGCTGGA
ACCAGCCAGGCTGCTCTGGCCACCATTGGCGGTCAATTGGCGTTTGTCAC
GGCGTTCCAAGGACTCC

BO09565.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG32631-PA 939 CG32631-RA 138..936 817..19 3995 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32631-RA 1289 CG32631-RA 215..1013 817..19 3995 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:58:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13556825..13557590 784..19 3830 100 Minus
Blast to na_te.dros performed on 2015-02-11 22:58:37 has no hits.

BO09565.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:14:25 Download gff for BO09565.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32631-PA 138..939 15..817 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:19:44 Download gff for BO09565.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32631-PA 138..939 15..817 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:31:11 Download gff for BO09565.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32631-RA 215..1021 11..817 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:34:09 Download gff for BO09565.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32631-RA 215..1021 11..817 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:34:09 Download gff for BO09565.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13556686..13556719 784..817 100 -> Minus
X 13556826..13557598 11..783 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:31:11 Download gff for BO09565.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13450719..13450752 784..817 100 -> Minus
arm_X 13450859..13451631 11..783 99   Minus

BO09565.5prime Sequence

839 bp (719 high quality bases) assembled on 2006-01-23

> BO09565.5prime
GAAGTTATCAGTCGACATGGCCAACATTCTAAGTTTTACCATCTTTATGG
CTGCCATTGCTATTGGACTGGCTTTAGCCACAACAACGACAGCAAGTACA
AGGACACCCATGCCCACTTCCACTGAAAAATCCATGGAAAAGGACGATCC
CATGGAGTCCTTGGAACGCCGTGACAAACGCCAATTGACCGCCAATGGTG
GCCAGAGCAGCCTGGCTGGTTCCAGCGGCAACTATCCCGTTTTCTTCGAT
GGCCTTAATGTGAATCCCCCGCTGCAGCCACTGCCGCCACTGCAGCAACT
TCAGCCTCTGCAGCCATTGCAGCCGATTACGGTGGTGACTCCTGTGGCCT
CCAGTTCGAATGCCCAGAGCCAGCAGCCGCAGTCCGGCTGGCTGCCTCAG
TTTAGCCAGAATCTTCCACTTATCGGAACCTGGGTGGGTGGCCTGCCCAA
TTTGATCAACGGCCTGGGACTCGGTTCGCTAAACGGCGGCTTCGGCACTC
TGGGCGGCCTGAATCTGGGCAACCTGGGACTGGGTGCAGTGGCGCCGGTG
GCCGCGGTGCCGGGCCAACTGCTCGGCTCGTCACCCAATCCCCAGACCAC
ATGCCCACTCACCCAGAAGCTCAACTGCCGCTGTGAGCCGCTCGTTCAGC
TGCCGGGCCTGAAGCCCAGTTCCAATCCACTGAGGACGCAGCTGGTGCAG
ATCATGCGGCAGAATGCGCGGAAGAACGAGGACGGTTCGCAGGAGGTGCG
CGTAATCCTGAGCAGCGGACATGTGATCTACCAGCGGACGGCCAAGGAAT
CGCGCCAGAGTGGCTACCTTTGCATGAAAAATCAGTCGG

BO09565.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:44:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG32631-PA 939 CG32631-RA 1..782 17..798 3910 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG32631-RA 1289 CG32631-RA 76..900 15..839 4020 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:41:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13556825..13557477 187..839 3130 98.6 Plus
X 23542271 X 13556547..13556719 15..187 865 100 Plus
Blast to na_te.dros performed on 2015-02-13 02:41:09 has no hits.

BO09565.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:14:26 Download gff for BO09565.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32631-PA 1..823 17..839 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:19:45 Download gff for BO09565.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32631-PA 1..823 17..839 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:15:02 Download gff for BO09565.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32631-RA 69..900 9..839 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:48:34 Download gff for BO09565.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32631-RA 69..900 9..839 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:48:34 Download gff for BO09565.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13556540..13556719 9..187 97 -> Plus
X 13556826..13557477 188..839 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:15:02 Download gff for BO09565.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13450573..13450752 9..187 97 -> Plus
arm_X 13450859..13451510 188..839 99   Plus

BO09565.complete Sequence

970 bp (970 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ631533

> BO09565.complete
GAAGTTATCAGTCGACATGGCCAACATTCTAAGTTTTACCATCTTTATGG
CTGCCATTGCTATTGGACTGGCTTTAGCCACAACAACGACAGCAAGTACA
AGGACACCCATGCCCACTTCCACTGAAAAATCCATGGAAAAGGACGATCC
CATGGAGTCCTTGGAACGCCGTGACAAACGCCAATTGACCGCCAATGGTG
GCCAGAGCAGCCTGGCTGGTTCCAGCGGCAACTATCCCGTTTTCTTCGAT
GGCCTTAATGTGAATCCCCCGCTGCAGCCACTGCCGCCACTGCAGCAACT
TCAGCCTCTGCAGCCATTGCAGCCGATTACGGTGGTGACTCCTGTGGCCT
CCAGTTCGAATGCCCAGAGCCAGCAGCCGCAGTCCGGCTGGCTGCCTCAG
TTTAGCCAGAATCTTCCACTTATCGGAACCTGGGTGGGTGGCCTGCCCAA
TTTGATCAACGGCCTGGGACTCGGTTCGCTAAACGGCGGCTTCGGCACTC
TGGGCGGCCTGAATCTGGGCAACCTGGGACTGGGTGCAGTGGCGCCGGTG
GCCGCGGTGCCGGGCCAACTGCTCGGCTCGTCACCCAATCCCCAGACCAC
ATGCCCACTCACCCAGAAGCTCAACTGCCGCTGTGAGCCGCTCGTTCAGC
TGCCGGGCCTGAAGCCCAGTTCCAATCCACTGAGGACGCAGCTGGTGCAG
ATCATGCGGCAGAATGCGCGGAAGAACGAGGACGGTTCGCAGGAGGTGCG
CGTAATCCTGAGCAGCGGACATGTGATCTACCAGCGGACGGCCAAGGATC
GCGGCCAGAGTGGCTACCTTGCCATGAGAATTCAGTCGGGCAGGTACTTC
AACATCTACTACAGTGTCAACGAGAAGGAGTACACGGTGCGGGCGGATGT
CAAGGACACGCCACCCACCTCCGATTTTGACGACGAGCTGAGTGGTCAGT
TCGCAAGCTTTCTAGACCAT

BO09565.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32631-RA 939 CG32631-PA 1..936 17..952 4680 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32631-RA 1289 CG32631-RA 76..1013 15..952 4690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:41:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13556825..13557590 187..952 3830 100 Plus
X 23542271 X 13556547..13556719 15..187 865 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:41:21 has no hits.

BO09565.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:05:57 Download gff for BO09565.complete
Subject Subject Range Query Range Percent Splice Strand
CG32631-RA 1..939 17..956 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:25:19 Download gff for BO09565.complete
Subject Subject Range Query Range Percent Splice Strand
CG32631-RA 69..1021 9..960 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:50 Download gff for BO09565.complete
Subject Subject Range Query Range Percent Splice Strand
CG32631-RA 78..1013 17..954 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:05:57 Download gff for BO09565.complete
Subject Subject Range Query Range Percent Splice Strand
CG32631-RA 69..1021 9..960 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:49 Download gff for BO09565.complete
Subject Subject Range Query Range Percent Splice Strand
CG32631-RA 78..1013 17..954 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:49 Download gff for BO09565.complete
Subject Subject Range Query Range Percent Splice Strand
X 13556549..13556719 17..187 100 -> Plus
X 13556826..13557590 188..954 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:50 Download gff for BO09565.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13450582..13450752 17..187 100 -> Plus
arm_X 13450859..13451623 188..954 99   Plus

BO09565.pep Sequence

Translation from 16 to 970

> BO09565.pep
MANILSFTIFMAAIAIGLALATTTTASTRTPMPTSTEKSMEKDDPMESLE
RRDKRQLTANGGQSSLAGSSGNYPVFFDGLNVNPPLQPLPPLQQLQPLQP
LQPITVVTPVASSSNAQSQQPQSGWLPQFSQNLPLIGTWVGGLPNLINGL
GLGSLNGGFGTLGGLNLGNLGLGAVAPVAAVPGQLLGSSPNPQTTCPLTQ
KLNCRCEPLVQLPGLKPSSNPLRTQLVQIMRQNARKNEDGSQEVRVILSS
GHVIYQRTAKDRGQSGYLAMRIQSGRYFNIYYSVNEKEYTVRADVKDTPP
TSDFDDELSGQFASFLDH

BO09565.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:27:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32631-PA 312 CG32631-PA 1..312 1..312 1612 100 Plus