Clone Sequence Records
BO09649.complete Sequence
1912 bp assembled on 2010-02-17
GenBank Submission: KX796572
> BO09649.complete
GAAGTTATCAGTCGTCATGGGCTGGATTTTTGCTGTGCTCGTCGCACTGG
TGGCTCTGCTACTGACGAAACCCGGCTGGCGCTGGTTCTACATAGCGGGT
GCGACCGCTAGTCGCGATCTAACAGCTCTCTGGGCCTATATCAAGCTGCT
GAGGTACACGAAGCGCCATGAGCGGCTCAACTACACGGTGGCGGACGTCT
TCGAACGAAATGTTCAAGCCCATCCGGACAAGGTGGCTGTGGTCAGTGAG
ACGCAACGCTGGACCTTCCGTCAGGTGAACGAGCATGCGAACAAAGTGGC
CAATGTGCTGCAGGCTCAGGGCTACAAAAAGGGCGATGTGGTGGCCCTGT
TGCTGGAGAACCGCGCCGAGTACGTGGCCACCTGGCTGGGTCTCTCCAAG
ATCGGTGTGATCACACCGCTGATCAACACGAATCTGCGCGGTCCCTCCCT
GCTGCACAGCATCACGGTGGCCCATTGCTCGGCTCTCATTTACGGCGAGG
ACTTCCTGGAAGCTGTCACCGACGTGGCCAAGGATCTGCCAGCGAACCTC
ACACTCTTCCAGTTCAACAACGAGAACAACAACAGCGAGACGGAAAAGAA
CATACCGCAGGCCAAGAATCTGAACGCGCTGCTGACCACGGCCAGCTATG
AGAAGCCTAACAAGACGCAGGTTAACCACCACGACAAGCTGGTCTACATC
TACACCTCCGGCACCACAGGATTGCCAAAGGCTGCGGTTATCTCTCACTC
CCGTTATCTGTTTATCGCTGCTGGCATCCACTACACCATGGGTTTCCAGG
AGGAGGACATCTTCTACACACCCTTGCCTTTGTACCACACCGCTGGTGGC
ATTATGTGCATGGGTCAGTCGGTGCTTTTCGGCTCCACGGTCTCCATTCG
CAAGAAGTTCTCGGCATCCAACTATTTTGCCGACTGCGCCAAGTATAATG
CAACTATTGGTCAGTACATCGGTGAGATGGCTCGCTACATTCTAGCTACG
AAACCCTCGGAATACGACCAGAAACACCGAGTGCGTCTGGTCTTTGGAAA
CGGACTGCGACCGCAGATTTGGCCACAGTTTGTGCAGCGCTTCAACATTG
CCAAGGTTGGCGAGTTCTATGGCGCCACCGAGGGTAATGCGAACATCATG
AATCATGACAACACGGTGGGCGCCATCGGCTTTGTGTCGCGCATACTGCC
CAAGATCTATCCAATCTCGATCATTCGCGCCGATCCGGACACAGGAGAGC
CCATTAGGGATAGGAATGGCCTATGCCAGCTGTGCGCTCCCAACGAACCA
GGCGTATTCATCGGCAAGATCGTCAAGGGAAATCCTTCTCGCGAATTCCT
CGGCTACGTCGATGAAAAGGCCTCCGCGAAGAAGATTGTCAAGGATGTGT
TCAAGCATGGCGATATGGCTTTCATCTCCGGAGATCTGCTGGTTGCCGAC
GAGAAGGGTTATCTGTACTTCAAGGATCGCACCGGTGACACCTTCCGCTG
GAAGGGCGAGAATGTTTCCACCAGCGAGGTGGAGGCGCAGGTCAGCAATG
TGGCCGGTTACAAGGATACCGTCGTTTACGGCGTAACCATTCCGCACACC
GAGGGAAGGGCCGGCATGGCCGCCATCTATGATCCTGAGCGAGAATTGGA
CCTCGACGTCTTCGCCGCTAGCTTGGCCAAGGTGCTGCCCGCGTACGCTC
GTCCCCAGATCATTCGATTGCTCACCAAGGTGGACCTGACTGGAACCTTT
AAGCTGCGCAAGGTAGACCTGCAGAAGGAGGGCTACGATCCGAACGCGAT
CAAGGACGCGCTGTACTACCAGACTTCCAAGGGGCGGTACGAGCTGCTCA
CGCCCCAGGTTTACGACCAGGTGCAGCGCAACGAAATCCGCTTCGCAAGC
TTTCTAGACCAT
BO09649.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:14:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fatp-RE | 1881 | CG7400-PE | 1..1878 | 17..1894 | 9090 | 98.9 | Plus |
| Fatp-RD | 2007 | CG7400-PD | 127..2004 | 17..1894 | 9090 | 98.9 | Plus |
| Fatp-RB | 1881 | CG7400-PB | 1..1878 | 17..1894 | 9090 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fatp-RE | 2374 | CG7400-RE | 80..1957 | 17..1894 | 9090 | 98.9 | Plus |
| Fatp-RD | 2744 | CG7400-RD | 450..2327 | 17..1894 | 9090 | 98.9 | Plus |
| Fatp-RB | 3401 | CG7400-RB | 526..2403 | 17..1894 | 9090 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10511670..10512608 | 1894..956 | 4485 | 98.5 | Minus |
| 2L | 23513712 | 2L | 10512935..10513564 | 753..124 | 3120 | 99.7 | Minus |
| 2R | 25286936 | 2R | 23060322..23060995 | 962..1635 | 1030 | 76.9 | Plus |
| 2L | 23513712 | 2L | 10512668..10512870 | 955..753 | 955 | 98 | Minus |
| 2R | 25286936 | 2R | 23059470..23059725 | 242..497 | 605 | 82.4 | Plus |
| 2L | 23513712 | 2L | 10516486..10516592 | 123..17 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:14:15 has no hits.
BO09649.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-17 09:38:06 Download gff for
BO09649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fatp-RB | 524..2401 | 17..1896 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:50 Download gff for
BO09649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fatp-RB | 526..2403 | 17..1896 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:51 Download gff for
BO09649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fatp-RB | 526..2403 | 17..1896 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:51 Download gff for
BO09649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10512668..10512869 | 754..955 | 98 | <- | Minus |
| 2L | 10511668..10512608 | 956..1896 | 98 | <- | Minus |
| 2L | 10512935..10513564 | 124..753 | 99 | <- | Minus |
| 2L | 10516486..10516592 | 17..123 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:50 Download gff for
BO09649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10511668..10512608 | 956..1896 | 98 | <- | Minus |
| arm_2L | 10512668..10512869 | 754..955 | 98 | <- | Minus |
| arm_2L | 10512935..10513564 | 124..753 | 99 | <- | Minus |
| arm_2L | 10516486..10516592 | 17..123 | 100 | | Minus |
BO09649.3prime Sequence
916 bp (809 high quality bases) assembled on 2006-01-28
> BO09649.3prime
ATGGTCTAGAAAGCTTGCGAAGCGGATTTCGTTGCGCTGCACCTGGTCGT
AAACCTGGGGCGTGAGCAGCTCGTACCGCCCCTTGGAAGTCTGGTAGTAC
AGCGCGTCCTTGATCGCGTTCGGATCGTAGCCCTCCTTCTGCAGGTCTAC
CTTGCGCAGCTTAAAGGTTCCAGTCAGGTCCACCTTGGTGAGCAATCGAA
TGATCTGGGGACGAGCGTACGCGGGCAGCACCTTGGCCAAGCTAGCGGCG
AAGACGTCGAGGTCCAATTCTCGCTCAGGATCATAGATGGCGGCCATGCC
GGCCCTTCCCTCGGTGTGCGGAATGGTTACGCCGTAAACGACGGTATCCT
TGTAACCGGCCACATTGCTGACCTGCGCCTCCACCTCGCTGGTGGAAACA
TTCTCGCCCTTCCAGCGGAAGGTGTCACCGGTGCGATCCTTGAAGTACAG
ATAACCCTTCTCGTCGGCAACCAGCAGATCTCCGGAGATGAAAGCCATAT
CGCCATGCTTGAACACATCCTTGACAATCTTCTTCGCGGAGGCCTTTTCA
TCGACGTAGCCGAGGAATTCGCGAGAAGGATTTCCCTTGACGATCTTGCC
GATGAATACGCCTGGTTCGTTGGGAGCGCACAGCTGGCATAGGCCATTCC
TATCCCTAATGGGCTCTCCTGTGTCCGGATCGGCGCGAATGATCGAGATT
GGATAGATCTTGGGCAGTATGCGCGACACAAAGCCGATGGCGCCCACCGT
GTTGTCATGATTCATGATGTTCGCATTACCCTCGGTGGCGCCATAGAACT
CGCCAACCTTGGCAATGTTGAAGCGCTGCACAAACTGTGGCCAAATCTGC
GGTCGCAGTCCGTTTCAAAAGACCAGACGCACTCGGTGTTTCTGGTCGTA
TTCCGAGGGGTTCGTA
BO09649.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:46:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7400-PA | 1881 | Fatp-RA | 981..1878 | 916..19 | 4115 | 98.3 | Minus |
| CG7400-PB | 1881 | Fatp-RB | 981..1878 | 916..19 | 4115 | 98.3 | Minus |
| CG30194-PC | 2016 | CG30194-RC | 1528..1659 | 504..373 | 285 | 88.6 | Minus |
| CG30194-PB | 2112 | CG30194-RB | 1624..1755 | 504..373 | 285 | 88.6 | Minus |
| CG30194-PD | 2145 | CG30194-RD | 1657..1788 | 504..373 | 285 | 88.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fatp-RE | 2374 | CG7400-RE | 1060..1957 | 916..19 | 4265 | 98.3 | Minus |
| Fatp-RD | 2744 | CG7400-RD | 1430..2327 | 916..19 | 4265 | 98.3 | Minus |
| Fatp-RB | 3401 | CG7400-RB | 1506..2403 | 916..19 | 4265 | 98.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:44:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10511670..10512567 | 19..916 | 4265 | 98.3 | Plus |
| 2R | 25286936 | 2R | 23060374..23060995 | 899..278 | 995 | 77.3 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:44:41 has no hits.
BO09649.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:16:47 Download gff for
BO09649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fatp-PA | 982..1881 | 15..915 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:23:01 Download gff for
BO09649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7400-PB | 982..1881 | 15..915 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 05:08:31 Download gff for
BO09649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fatp-RB | 1507..2407 | 14..915 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:30:29 Download gff for
BO09649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fatp-RB | 1507..2407 | 14..915 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:30:29 Download gff for
BO09649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10511666..10512566 | 14..915 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 05:08:31 Download gff for
BO09649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10511666..10512566 | 14..915 | 98 | | Plus |
BO09649.5prime Sequence
961 bp (884 high quality bases) assembled on 2006-01-28
> BO09649.5prime
GAAGTTATCAGTCGTCATGGGCTGGATTTTTGCTGTGCTCGTCGCACTGG
TGGCTCTGCTACTGACGAAACCCGGCTGGCGCTGGTTCTACATAGCGGGT
GCGACCGCTAGTCGCGATCTAACAGCTCTCTGGGCCTATATCAAGCTGCT
GAGGTACACGAAGCGCCATGAGCGGCTCAACTACACGGTGGCGGACGTCT
TCGAACGAAATGTTCAAGCCCATCCGGACAAGGTGGCTGTGGTCAGTGAG
ACGCAACGCTGGACCTTCCGTCAGGTGAACGAGCATGCGAACAAAGTGGC
CAATGTGCTGCAGGCTCAGGGCTACAAAAAGGGCGATGTGGTGGCCCTGT
TGCTGGAGAACCGCGCCGAGTACGTGGCCACCTGGCTGGGTCTCTCCAAG
ATCGGTGTGATCACACCGCTGATCAACACGAATCTGCGCGGTCCCTCCCT
GCTGCACAGCATCACGGTGGCCCATTGCTCGGCTCTCATTTACGGCGAGG
ACTTCCTGGAAGCTGTCACCGACGTGGCCAAGGATCTGCCAGCGAACCTC
ACACTCTTCCAGTTCAACAACGAGAACAACAACAGCGAGACGGAAAAGAA
CATACCGCAGGCCAAGAATCTGAACGCGCTGCTGACCACGGCCAGCTATG
AGAAGCCTAACAAGACGCAGGTTAACCACCACGACAAGCTGGTCTACATC
TACACCTCCGGCACCACAGGATTGCCAAAGGCTGCGGTTATCTCTCACTC
CCGTTATCTGTTTATCGCTGCTGGCATCCACTACACCATGGGTTTCCAGG
AGGAGGACATCTTCTACACACCCTTGCCTTTGTACCACACCGCTGGTGGC
ATTATGTGCATGGGTCAGTCGGTGCTTTTCGGCTCCACGGTCTCCATTCG
CAAGAAGTTCTCGGCATCCAACTATTTTGCCGACTGCGCCAAGTATAAAT
GCACTATGGGT
BO09649.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:46:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7400-PA | 1881 | Fatp-RA | 1..932 | 17..948 | 4510 | 99.3 | Plus |
| CG7400-PB | 1881 | Fatp-RB | 1..932 | 17..948 | 4510 | 99.3 | Plus |
| CG30194-PC | 2016 | CG30194-RC | 481..533 | 377..429 | 165 | 92.4 | Plus |
| CG30194-PB | 2112 | CG30194-RB | 577..629 | 377..429 | 165 | 92.4 | Plus |
| CG30194-PD | 2145 | CG30194-RD | 610..662 | 377..429 | 165 | 92.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:54:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fatp-RE | 2374 | CG7400-RE | 80..1024 | 17..961 | 4575 | 99 | Plus |
| Fatp-RD | 2744 | CG7400-RD | 450..1394 | 17..961 | 4575 | 99 | Plus |
| Fatp-RB | 3401 | CG7400-RB | 526..1470 | 17..961 | 4575 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:54:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10512935..10513564 | 753..124 | 3120 | 99.7 | Minus |
| 2L | 23513712 | 2L | 10512675..10512870 | 948..753 | 920 | 98 | Minus |
| 2R | 25286936 | 2R | 23059470..23059725 | 242..497 | 605 | 82.4 | Plus |
| 2L | 23513712 | 2L | 10516486..10516592 | 123..17 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:54:31 has no hits.
BO09649.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:16:48 Download gff for
BO09649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fatp-PA | 1..945 | 17..961 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:23:02 Download gff for
BO09649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7400-PB | 1..945 | 17..961 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:22:29 Download gff for
BO09649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fatp-RB | 526..1470 | 17..961 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:06:11 Download gff for
BO09649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fatp-RB | 526..1470 | 17..961 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:06:11 Download gff for
BO09649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10516486..10516592 | 17..123 | 100 | | Minus |
| 2L | 10512662..10512869 | 754..961 | 95 | <- | Minus |
| 2L | 10512935..10513564 | 124..753 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:22:29 Download gff for
BO09649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10512662..10512869 | 754..961 | 95 | <- | Minus |
| arm_2L | 10512935..10513564 | 124..753 | 99 | <- | Minus |
| arm_2L | 10516486..10516592 | 17..123 | 100 | | Minus |
BO09649.pep Sequence
Translation from 16 to 1912
> BO09649.pep
MGWIFAVLVALVALLLTKPGWRWFYIAGATASRDLTALWAYIKLLRYTKR
HERLNYTVADVFERNVQAHPDKVAVVSETQRWTFRQVNEHANKVANVLQA
QGYKKGDVVALLLENRAEYVATWLGLSKIGVITPLINTNLRGPSLLHSIT
VAHCSALIYGEDFLEAVTDVAKDLPANLTLFQFNNENNNSETEKNIPQAK
NLNALLTTASYEKPNKTQVNHHDKLVYIYTSGTTGLPKAAVISHSRYLFI
AAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQSVLFGSTVSIRKKFSA
SNYFADCAKYNATIGQYIGEMARYILATKPSEYDQKHRVRLVFGNGLRPQ
IWPQFVQRFNIAKVGEFYGATEGNANIMNHDNTVGAIGFVSRILPKIYPI
SIIRADPDTGEPIRDRNGLCQLCAPNEPGVFIGKIVKGNPSREFLGYVDE
KASAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRWKGENV
STSEVEAQVSNVAGYKDTVVYGVTIPHTEGRAGMAAIYDPERELDLDVFA
ASLAKVLPAYARPQIIRLLTKVDLTGTFKLRKVDLQKEGYDPNAIKDALY
YQTSKGRYELLTPQVYDQVQRNEIRFASFLDH
BO09649.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:18:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fatp-PE | 626 | CG7400-PE | 1..626 | 1..626 | 3265 | 100 | Plus |
| Fatp-PD | 668 | CG7400-PD | 43..668 | 1..626 | 3265 | 100 | Plus |
| Fatp-PB | 626 | CG7400-PB | 1..626 | 1..626 | 3265 | 100 | Plus |
| Fatp-PA | 626 | CG7400-PA | 1..626 | 1..626 | 3265 | 100 | Plus |
| CG44252-PB | 703 | CG44252-PB | 76..703 | 4..626 | 2345 | 69.3 | Plus |
