Clone BO09787 Report

Search the DGRC for BO09787

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:97
Well:87
Vector:pDNR-Dual
Associated Gene/TranscriptCG5902-RA
Protein status:BO09787.pep: validated full length
Sequenced Size:763

Clone Sequence Records

BO09787.3prime Sequence

761 bp (760 high quality bases) assembled on 2006-01-28

> BO09787.3prime
ATGGTCTAGAAAGCTTGCGCACTGCACCTTGCCGAACTGGGCGCGACGCT
CCTGGTACTCGCGGTACTCCTTGTAGTGCATCTGGATCTCCTGCGAACGG
TAGCGCGTTAGCTTTATGGACTTCCTCGTCTCCGGAGTTATGGCAGCCCG
ATAGCCGCCCTTCCGTAGGAGTGAGTCAATGGTCTGCAGCTGGTCCCAGC
CCTGTTCGGTGGCCACCTGCGGCAAATAGGTGGCTGTGCGCTTGCAGCCG
CGTTCTGTGAGGAACTCGATGCGGATGCCATGGACGCCCAGTTGCCAGTC
CAGGTGGCCCTGAGCCTCCTCGAAGTTCTGCAGGATCGAGACCGAGACAG
TTAGCCGTGGCAACTCATCTCTAGAGATAGGTGCAAATCTAGAGTCCTTA
AAGGCGCTGGTCAAGGCGTACTCCCGAAGACCATGGTGCAGTTCCATTGC
ACTAAAAGTACCAATGCAGCCACGCAGCCTCTTGTCACGCCCAATCTTCC
AGGTGACAAAGAGTGGGTAGGCGTCGTTGCTAAACACCGGCACCGATGGA
CCATCGACGTTGTTCAGCTCACAGTCAAGCACCTCGAAGCAGAACAGGCA
CATGTCTGGCACAGCGACGGTCTTCATGCCATGGCCGTTGGAGAACCGTT
GCGGCTGGTGCACCATCTGCTGGTGCTGGTATTCCGGATCTCCGTTGCTG
GAGTGCGGCTGCTGCTGCTGGTAGTTGTTGTAGTGGGAGTTGGACATGTC
GACTGATAACT

BO09787.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:49:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG5902-PB 732 CG5902-RB 1..729 747..19 3620 99.8 Minus
CG5902-PA 732 CG5902-RA 1..729 747..19 3620 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG5902-RC 1953 CG5902-RC 642..1371 748..19 3635 99.9 Minus
CG5902-RA 1956 CG5902-RA 645..1374 748..19 3635 99.9 Minus
CG5902-RB 1725 CG5902-RB 414..1143 748..19 3635 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:11:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23987427..23988156 748..19 3635 99.9 Minus
Blast to na_te.dros performed 2015-02-12 04:11:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6743..6827 733..648 156 69 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6836..6925 730..643 155 69.2 Minus

BO09787.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:21:08 Download gff for BO09787.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5902-PA 1..732 15..747 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:28:25 Download gff for BO09787.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5902-PA 1..732 15..747 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:02:14 Download gff for BO09787.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5902-RB 406..1146 15..755 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:53:28 Download gff for BO09787.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5902-RB 406..1146 15..755 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:53:28 Download gff for BO09787.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 23987419..23988159 15..755 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:02:14 Download gff for BO09787.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19813141..19813881 15..755 99   Minus

BO09787.5prime Sequence

761 bp (760 high quality bases) assembled on 2006-01-28

> BO09787.5prime
GAAGTTATCAGTCGACATGTCCAACTCCCACTACAACAACTACCAGCAGC
AGCAGCCGCACTCCAGCAACGGAGATCCGGAATACCAGCACCAGCAGATG
GTGCACCAGCCGCAACGGTTCTCCAACGGCCATGGCATGAAGACCGTCGC
TGTGCCAGACATGTGCCTGTTCTGCTTCGAGGTGCTTGACTGTGAGCTGA
ACAACGTCGATGGTCCATCGGTGCCGGTGTTTAGCAACGACGCCTACCCA
CTCTTTGTCACCTGGAAGATTGGGCGTGACAAGAGGCTGCGTGGCTGCAT
TGGTACTTTTAGTGCAATGGAACTGCACCATGGTCTTCGGGAGTACGCCT
TGACCAGCGCCTTTAAGGACTCTAGATTTGCACCTATCTCTAGAGATGAG
TTGCCACGGCTAACTGTCTCGGTCTCGATCCTGCAGAACTTCGAGGAGGC
TCAGGGCCACCTGGACTGGCAACTGGGCGTCCATGGCATCCGCATCGAGT
TCCTCACAGAACGCGGCTGCAAGCGCACAGCCACCTATTTGCCGCAGGTG
GCCACCGAACAGGGCTGGGACCAGCTGCAGACCATTGACTCACTCCTACG
GAAGGGCGGCTATCGGGCTGCCATAACTCCGGAGACGAGGAAGTCCATAA
AGCTAACGCGCTACCGTTCGCAGGAGATCCAGATGCACTACAAGGAGTAC
CGCGAGTACCAGGAGCGTCGCGCCCAGTTCGGCAAGGTGCAGTGCGCAAG
CTTTCTAGACC

BO09787.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG5902-PB 732 CG5902-RB 1..729 17..745 3620 99.8 Plus
CG5902-PA 732 CG5902-RA 1..729 17..745 3620 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 02:02:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG5902-RC 1953 CG5902-RC 642..1371 16..745 3635 99.9 Plus
CG5902-RA 1956 CG5902-RA 645..1374 16..745 3635 99.9 Plus
CG5902-RB 1725 CG5902-RB 414..1143 16..745 3635 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 02:02:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23987427..23988156 16..745 3635 99.9 Plus
Blast to na_te.dros performed 2015-02-10 02:02:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6743..6827 31..116 156 69 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6836..6925 34..121 155 69.2 Plus

BO09787.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:21:09 Download gff for BO09787.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5902-PA 1..732 17..749 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:28:26 Download gff for BO09787.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5902-PA 1..732 17..749 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:36:39 Download gff for BO09787.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5902-RB 406..1146 9..749 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:05:20 Download gff for BO09787.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5902-RB 406..1146 9..749 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:05:20 Download gff for BO09787.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23987419..23988159 9..749 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:36:39 Download gff for BO09787.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19813141..19813881 9..749 99   Plus

BO09787.complete Sequence

763 bp (763 high quality bases) assembled on 2006-02-16

GenBank Submission: FJ631574

> BO09787.complete
GAAGTTATCAGTCGACATGTCCAACTCCCACTACAACAACTACCAGCAGC
AGCAGCCGCACTCCAGCAACGGAGATCCGGAATACCAGCACCAGCAGATG
GTGCACCAGCCGCAACGGTTCTCCAACGGCCATGGCATGAAGACCGTCGC
TGTGCCAGACATGTGCCTGTTCTGCTTCGAGGTGCTTGACTGTGAGCTGA
ACAACGTCGATGGTCCATCGGTGCCGGTGTTTAGCAACGACGCCTACCCA
CTCTTTGTCACCTGGAAGATTGGGCGTGACAAGAGGCTGCGTGGCTGCAT
TGGTACTTTTAGTGCAATGGAACTGCACCATGGTCTTCGGGAGTACGCCT
TGACCAGCGCCTTTAAGGACTCTAGATTTGCACCTATCTCTAGAGATGAG
TTGCCACGGCTAACTGTCTCGGTCTCGATCCTGCAGAACTTCGAGGAGGC
TCAGGGCCACCTGGACTGGCAACTGGGCGTCCATGGCATCCGCATCGAGT
TCCTCACAGAACGCGGCTGCAAGCGCACAGCCACCTATTTGCCGCAGGTG
GCCACCGAACAGGGCTGGGACCAGCTGCAGACCATTGACTCACTCCTACG
GAAGGGCGGCTATCGGGCTGCCATAACTCCGGAGACGAGGAAGTCCATAA
AGCTAACGCGCTACCGTTCGCAGGAGATCCAGATGCACTACAAGGAGTAC
CGCGAGTACCAGGAGCGTCGCGCCCAGTTCGGCAAGGTGCAGTGCGCAAG
CTTTCTAGACCAT

BO09787.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG5902-RC 732 CG5902-PC 1..729 17..745 3630 99.9 Plus
CG5902-RA 732 CG5902-PA 1..729 17..745 3630 99.9 Plus
CG5902-RB 732 CG5902-PB 1..729 17..745 3630 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:48:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG5902-RC 1953 CG5902-RC 642..1371 16..745 3635 99.9 Plus
CG5902-RA 1956 CG5902-RA 645..1374 16..745 3635 99.9 Plus
CG5902-RB 1725 CG5902-RB 414..1143 16..745 3635 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:48:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23987427..23988156 16..745 3635 99.9 Plus
Blast to na_te.dros performed 2014-11-27 01:48:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6743..6827 31..116 156 69 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6836..6925 34..121 155 69.2 Plus

BO09787.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:52:25 Download gff for BO09787.complete
Subject Subject Range Query Range Percent Splice Strand
CG5902-RA 1..732 17..749 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:24:24 Download gff for BO09787.complete
Subject Subject Range Query Range Percent Splice Strand
CG5902-RA 606..1346 9..749 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:16 Download gff for BO09787.complete
Subject Subject Range Query Range Percent Splice Strand
CG5902-RB 415..1143 17..747 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:52:25 Download gff for BO09787.complete
Subject Subject Range Query Range Percent Splice Strand
CG5902-RA 606..1346 9..749 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:03 Download gff for BO09787.complete
Subject Subject Range Query Range Percent Splice Strand
CG5902-RB 415..1143 17..747 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:03 Download gff for BO09787.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23987428..23988156 17..747 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:16 Download gff for BO09787.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19813150..19813878 17..747 99   Plus

BO09787.pep Sequence

Translation from 16 to 763

> BO09787.pep
MSNSHYNNYQQQQPHSSNGDPEYQHQQMVHQPQRFSNGHGMKTVAVPDMC
LFCFEVLDCELNNVDGPSVPVFSNDAYPLFVTWKIGRDKRLRGCIGTFSA
MELHHGLREYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLD
WQLGVHGIRIEFLTERGCKRTATYLPQVATEQGWDQLQTIDSLLRKGGYR
AAITPETRKSIKLTRYRSQEIQMHYKEYREYQERRAQFGKVQCASFLDH

BO09787.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG5902-PC 243 CG5902-PC 1..243 1..243 1308 100 Plus
CG5902-PA 243 CG5902-PA 1..243 1..243 1308 100 Plus
CG5902-PB 243 CG5902-PB 1..243 1..243 1308 100 Plus