Clone BO09810 Report

Search the DGRC for BO09810

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:98
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG3625-RB
Protein status:BO09810.pep: validated full length
Sequenced Size:778

Clone Sequence Records

BO09810.3prime Sequence

776 bp (775 high quality bases) assembled on 2006-04-19

> BO09810.3prime
ATGGTCTAGAAAGCTTGCGTTGGATTTGCGCTTGGCCAACTTCACTTCCT
TGGCCCAGACGGTATTGTTGAGGAACTCGCCCAGCAGGTAAAGTGACAGC
GTGAATCCAACGACGGCCGCAAAAAACAGGATGCGTTGCGGAAGCTGGAG
AACCTCGAGCACTGGATACACCCACACACCCGAGTAGTGCTTCACCACGT
GAATCCAAACCAGGTAGGCGCCCATGAAAATGGCCAGTCCTGCGAGTCCT
TGGCTTCGTTTTGGGTACGACCTGTACGAGATGAACAGCTCCAGGATGAT
GAAAACCACTATGTTGGTGTGCAGGACGTGGTTGAGCCAGCTGGGGAACA
CGGGGTCCAGAACCTTGGGGAAGACTAGCTCCCTGTCGATAGCGTACAGT
GTCCAGAAGGTCACGCCCACATTGATAGCCACTGGAAAGGCCAATGTAGC
CATCAGCCAGTCCTTGAACCTGCGAACCGCCGGAGGTTTCTTGGGTGTCA
GCTCATTAGTGCCCACGAAATCGTTGACCAGCGATACAATATAGTACAGT
GCCTGAATTATCGCATCCAGGAACGTTAGGTATTTGAATTTGCCCCCCCA
GGGATGATGGATCCTCATCTCTGGCTCGCTGGTGGGGAACTGCACGTAGT
TGTAGTCGTAATAGATGCCGTAGCCAAATTGCACGACTGCCGTCAGGTGG
AGCAGGGTCCTCAGAGCCCCGTAGACGCCCTGGTACACGGAGTTGCCTCG
CACGGATGCCATGTCGACTGATAACT

BO09810.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:50:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625-PB 747 CG3625-RB 1..744 762..19 3720 100 Minus
CG3625-PA 738 CG3625-RA 189..735 565..19 2735 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625-RB 1341 CG3625-RB 94..837 762..19 3720 100 Minus
CG3625-RA 995 CG3625-RA 222..768 565..19 2735 100 Minus
CG3625-RE 1401 CG3625-RE 354..897 562..19 2720 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 283889..284213 19..343 1625 100 Plus
2L 23513712 2L 284748..284969 341..562 1110 100 Plus
2L 23513712 2L 285428..285633 557..762 1015 99.5 Plus
Blast to na_te.dros performed on 2015-02-12 19:22:53 has no hits.

BO09810.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:21:41 Download gff for BO09810.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3625-PB 1..747 18..762 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:29:09 Download gff for BO09810.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3625-PB 1..747 18..762 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:17:41 Download gff for BO09810.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3625-RB 87..837 19..770 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 21:01:30 Download gff for BO09810.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3625-RB 87..837 19..770 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 21:01:30 Download gff for BO09810.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 283889..284210 19..340 100 <- Plus
2L 284748..284968 341..561 100 <- Plus
2L 285433..285640 562..770 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:17:41 Download gff for BO09810.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 283889..284210 19..340 100 <- Plus
arm_2L 284748..284968 341..561 100 <- Plus
arm_2L 285433..285640 562..770 98   Plus

BO09810.5prime Sequence

776 bp (775 high quality bases) assembled on 2006-04-19

> BO09810.5prime
GAAGTTATCAGTCGACATGGCATCCGTGCGAGGCAACTCCGTGTACCAGG
GCGTCTACGGGGCTCTGAGGACCCTGCTCCACCTGACGGCAGTCGTGCAA
TTTGGCTACGGCATCTATTACGACTACAACTACGTGCAGTTCCCCACCAG
CGAGCCAGAGATGAGGATCCATCATCCCTGGGGGGGCAAATTCAAATACC
TAACGTTCCTGGATGCGATAATTCAGGCACTGTACTATATTGTATCGCTG
GTCAACGATTTCGTGGGCACTAATGAGCTGACACCCAAGAAACCTCCGGC
GGTTCGCAGGTTCAAGGACTGGCTGATGGCTACATTGGCCTTTCCAGTGG
CTATCAATGTGGGCGTGACCTTCTGGACACTGTACGCTATCGACAGGGAG
CTAGTCTTCCCCAAGGTTCTGGACCCCGTGTTCCCCAGCTGGCTCAACCA
CGTCCTGCACACCAACATAGTGGTTTTCATCATCCTGGAGCTGTTCATCT
CGTACAGGTCGTACCCAAAACGAAGCCAAGGACTCGCAGGACTGGCCATT
TTCATGGGCGCCTACCTGGTTTGGATTCACGTGGTGAAGCACTACTCGGG
TGTGTGGGTGTATCCAGTGCTCGAGGTTCTCCAGCTTCCGCAACGCATCC
TGTTTTTTGCGGCCGTCGTTGGATTCACGCTGTCACTTTACCTGCTGGGC
GAGTTCCTCAACAATACCGTCTGGGCCAAGGAAGTGAAGTTGGCCAAGCG
CAAATCCAACGCAAGCTTTCTAGACC

BO09810.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:50:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625-PB 747 CG3625-RB 1..744 17..760 3720 100 Plus
CG3625-PA 738 CG3625-RA 189..735 214..760 2735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:57:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625-RB 1341 CG3625-RB 94..837 17..760 3720 100 Plus
CG3625-RA 995 CG3625-RA 222..768 214..760 2735 100 Plus
CG3625-RE 1401 CG3625-RE 354..897 217..760 2720 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:57:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 283889..284213 760..436 1625 100 Minus
2L 23513712 2L 284748..284969 438..217 1110 100 Minus
2L 23513712 2L 285428..285633 222..17 1015 99.5 Minus
Blast to na_te.dros performed on 2015-02-11 11:57:07 has no hits.

BO09810.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:21:41 Download gff for BO09810.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3625-PB 1..747 17..761 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:29:10 Download gff for BO09810.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3625-PB 1..747 17..761 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 16:22:45 Download gff for BO09810.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3625-RB 87..837 9..760 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:22:17 Download gff for BO09810.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3625-RB 87..837 9..760 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:22:17 Download gff for BO09810.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 283889..284210 439..760 100 <- Minus
2L 284748..284968 218..438 100 <- Minus
2L 285433..285640 9..217 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 16:22:45 Download gff for BO09810.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 283889..284210 439..760 100 <- Minus
arm_2L 284748..284968 218..438 100 <- Minus
arm_2L 285433..285640 9..217 98   Minus

BO09810.complete Sequence

778 bp (778 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ631582

> BO09810.complete
GAAGTTATCAGTCGACATGGCATCCGTGCGAGGCAACTCCGTGTACCAGG
GCGTCTACGGGGCTCTGAGGACCCTGCTCCACCTGACGGCAGTCGTGCAA
TTTGGCTACGGCATCTATTACGACTACAACTACGTGCAGTTCCCCACCAG
CGAGCCAGAGATGAGGATCCATCATCCCTGGGGGGGCAAATTCAAATACC
TAACGTTCCTGGATGCGATAATTCAGGCACTGTACTATATTGTATCGCTG
GTCAACGATTTCGTGGGCACTAATGAGCTGACACCCAAGAAACCTCCGGC
GGTTCGCAGGTTCAAGGACTGGCTGATGGCTACATTGGCCTTTCCAGTGG
CTATCAATGTGGGCGTGACCTTCTGGACACTGTACGCTATCGACAGGGAG
CTAGTCTTCCCCAAGGTTCTGGACCCCGTGTTCCCCAGCTGGCTCAACCA
CGTCCTGCACACCAACATAGTGGTTTTCATCATCCTGGAGCTGTTCATCT
CGTACAGGTCGTACCCAAAACGAAGCCAAGGACTCGCAGGACTGGCCATT
TTCATGGGCGCCTACCTGGTTTGGATTCACGTGGTGAAGCACTACTCGGG
TGTGTGGGTGTATCCAGTGCTCGAGGTTCTCCAGCTTCCGCAACGCATCC
TGTTTTTTGCGGCCGTCGTTGGATTCACGCTGTCACTTTACCTGCTGGGC
GAGTTCCTCAACAATACCGTCTGGGCCAAGGAAGTGAAGTTGGCCAAGCG
CAAATCCAACGCAAGCTTTCTAGACCAT

BO09810.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:20:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625-RB 747 CG3625-PB 1..744 17..760 3720 100 Plus
CG3625-RA 738 CG3625-PA 189..735 214..760 2735 100 Plus
CG3625-RE 744 CG3625-PE 198..741 217..760 2720 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:20:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625-RB 1341 CG3625-RB 94..837 17..760 3720 100 Plus
CG3625-RA 995 CG3625-RA 222..768 214..760 2735 100 Plus
CG3625-RE 1401 CG3625-RE 354..897 217..760 2720 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 283889..284213 760..436 1625 100 Minus
2L 23513712 2L 284748..284969 438..217 1110 100 Minus
2L 23513712 2L 285428..285633 222..17 1015 99.5 Minus
Blast to na_te.dros performed on 2014-11-27 20:20:07 has no hits.

BO09810.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:02:42 Download gff for BO09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RB 1..747 17..761 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:35:09 Download gff for BO09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RB 137..887 9..760 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:08:49 Download gff for BO09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RB 94..837 17..762 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:02:42 Download gff for BO09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RB 137..887 9..760 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:32 Download gff for BO09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RB 94..837 17..762 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:32 Download gff for BO09810.complete
Subject Subject Range Query Range Percent Splice Strand
2L 283887..284210 439..762 99 <- Minus
2L 284748..284968 218..438 100 <- Minus
2L 285433..285633 17..217 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:08:49 Download gff for BO09810.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 283887..284210 439..762 99 <- Minus
arm_2L 284748..284968 218..438 100 <- Minus
arm_2L 285433..285633 17..217 100   Minus

BO09810.pep Sequence

Translation from 16 to 778

> BO09810.pep
MASVRGNSVYQGVYGALRTLLHLTAVVQFGYGIYYDYNYVQFPTSEPEMR
IHHPWGGKFKYLTFLDAIIQALYYIVSLVNDFVGTNELTPKKPPAVRRFK
DWLMATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTN
IVVFIILELFISYRSYPKRSQGLAGLAIFMGAYLVWIHVVKHYSGVWVYP
VLEVLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSNAS
FLDH

BO09810.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625-PB 248 CG3625-PB 1..248 1..248 1308 100 Plus
CG3625-PA 245 CG3625-PA 8..245 3..248 1049 84.1 Plus
CG3625-PE 247 CG3625-PE 14..247 19..248 998 84.2 Plus
CG3625-PC 247 CG3625-PC 14..247 19..248 998 84.2 Plus
CG11601-PC 275 CG11601-PC 29..270 7..246 638 48.4 Plus