Clone Sequence Records
BO09861.3prime Sequence
906 bp (851 high quality bases) assembled on 2006-04-19
> BO09861.3prime
ATGGTCTAGAAAGCTTGCACTGGTCCGCGGCTGGAGGCGCACGCGGAATC
CCTCCTCACGCTTTAGGATGATGTCCGCCTGCAGTTTGAAGTCCGATTCG
GTCAGGTCCGAGTAGACACGGTAGTTCCGCAAAATGGTCGACAGTAGGAT
CTTCAGCTTGAGCATCGCATACTTGCGCCCCACACAGCTGCGTGGTCCCG
CAGAGAACGGCACAAAGGCGTAGTAGTGGCGATTGGCCTGGCGCTCCGGC
AGGAAGTTGTCCGGATCGAAGACGTTGGGATTGGCGTAGACCTTCGGATT
GCGATGGAGCAGGACGGTGGCCACCGTCACCGTGGCGCCCCTGGGAATCA
CGTAGTTGCCCGAGTTCAGCTTGAGATCCTCCTGCAGCTCGCGGGCGATC
AATGGAACGGGTGGGTACATGCGCAGCGTCTCCATCAGACACCGCTCCAG
ATACTTCATCTCCAGTGTGTCCTGAAATGTGGCCGGTCGCTGGGAGTCGC
CAAAAATGGAGTCGAGTTCGGCCAGTACGCGATCCTGGATGTCCTGGTGG
ATGCCCATCAGCGAGAGAAAGAACGAGGAGCCGGCTGCCGTGGTGTCGTG
TCCCTCGAACATGATCGTGTCCACCTGCTCCTTAATTTCCGTGTCCGTAA
TGAGTGCTCCATTCTGTGCACTTTCGAGCATCAAATCAAGGAAGGCCAGC
CGCTTCTTCTCACCAATATCATTGTCCTCCACATCCAGGTCATCCTTGAG
ACCAGCCGACTGTCCATAGGACAGTCCCGCCACCGGACTGGCCTTCTCCT
TATCCTTCTCCCGATCCTTCTCATCGCTGCCAGCTGTTGATGGGGTCTGG
TCAACCCACCATTCTGTTCCCGTTCCCGCTCTAAGGCGGCTGCCTTCAGC
TCGCAC
BO09861.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:51:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11715-PA | 1725 | Cyp4g15-RA | 886..1722 | 855..19 | 4185 | 100 | Minus |
CG11715-PB | 1137 | Cyp4g15-RB | 298..1134 | 855..19 | 4185 | 100 | Minus |
CG11715-PA | 1725 | Cyp4g15-RA | 834..884 | 906..856 | 255 | 100 | Minus |
CG11715-PB | 1137 | Cyp4g15-RB | 246..296 | 906..856 | 255 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:01:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-RC | 2632 | CG11715-RC | 1369..2257 | 906..19 | 4420 | 99.9 | Minus |
Cyp4g15-RA | 2505 | CG11715-RA | 1369..2257 | 906..19 | 4420 | 99.9 | Minus |
Cyp4g1-RA | 2279 | CG3972-RA | 1492..1736 | 290..46 | 325 | 76.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:01:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11481778..11482214 | 906..471 | 2135 | 99.8 | Minus |
X | 23542271 | X | 11482303..11482602 | 478..179 | 1485 | 99.7 | Minus |
X | 23542271 | X | 11482697..11482858 | 180..19 | 810 | 100 | Minus |
X | 23542271 | X | 467600..467844 | 46..290 | 325 | 75.5 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:01:53 has no hits.
BO09861.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:23:15 Download gff for
BO09861.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11715-PB | 246..1137 | 16..906 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:31:24 Download gff for
BO09861.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11715-PB | 246..1137 | 16..906 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:10:07 Download gff for
BO09861.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 1369..2261 | 15..906 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:10:22 Download gff for
BO09861.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 1369..2261 | 15..906 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:10:22 Download gff for
BO09861.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11481778..11482213 | 472..906 | 99 | -> | Minus |
X | 11482310..11482601 | 180..471 | 100 | -> | Minus |
X | 11482698..11482862 | 15..179 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:10:07 Download gff for
BO09861.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11375811..11376246 | 472..906 | 99 | -> | Minus |
arm_X | 11376343..11376634 | 180..471 | 100 | -> | Minus |
arm_X | 11376731..11376895 | 15..179 | 98 | | Minus |
BO09861.5prime Sequence
936 bp (807 high quality bases) assembled on 2006-04-19
> BO09861.5prime
GAAGTTATCAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCT
CACCCAGCAGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGG
TACATCTACTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACG
ACTGCCGGGACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGA
TTGGACCCGCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCT
TTCGAGCACATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCAT
CTACGATCCGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCG
ACAAGGCATCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTG
CTGATCAGCACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACC
CACATTCCATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGA
ACTCGCGTAATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTT
GATTGCCATGATTACATGAGCGAGGCAACCGTGGAGATTCTATTGGAGAC
TGCGATGGGTGTGTCGAAGAAAACGCAGGACAAATCGGGATTCGAGTATG
CGATGGCCGTGATGCGGATGTGCGACATCCTTCACGCCCGCCATCGGAGC
ATCTTTCTGCGCAACGAGTTCGTGTTCACCCTGACGCGCTACTACAAGGA
GCANGGTCGCCTGCTGAACATCATCCACGGCCTGACCACCAAGGTGATCC
GCAGCAAGAAGGCGGCCTTTGAGCAGGGCACCCGTGGATCCCTTGCCCAG
TGCGAGCTGAGGGCAGCCGCCTTAGAGCGGGGACGGGAAACAGAATGGTG
GTGTTGACCAGACCCCATCAACAGCTGGCAGCGATG
BO09861.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:51:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11715-PA | 1725 | Cyp4g15-RA | 1..873 | 17..889 | 4296 | 99.6 | Plus |
CG11715-PB | 1137 | Cyp4g15-RB | 1..285 | 605..889 | 1356 | 98.9 | Plus |
CG11715-PA | 1725 | Cyp4g15-RA | 872..919 | 889..936 | 240 | 100 | Plus |
CG11715-PB | 1137 | Cyp4g15-RB | 284..331 | 889..936 | 240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:25:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-RC | 2632 | CG11715-RC | 536..1454 | 17..936 | 4534 | 99.6 | Plus |
Cyp4g15-RA | 2505 | CG11715-RA | 536..1454 | 17..936 | 4534 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:25:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11481524..11481863 | 596..936 | 1614 | 98.8 | Plus |
X | 23542271 | X | 11478384..11478583 | 216..415 | 1000 | 100 | Plus |
X | 23542271 | X | 11477593..11477791 | 17..215 | 995 | 100 | Plus |
X | 23542271 | X | 11479011..11479196 | 411..596 | 930 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:25:52 has no hits.
BO09861.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:23:16 Download gff for
BO09861.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11715-PA | 1..919 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:31:25 Download gff for
BO09861.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11715-PA | 1..919 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:44:50 Download gff for
BO09861.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 532..1454 | 10..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:30:48 Download gff for
BO09861.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 532..1454 | 10..936 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:30:48 Download gff for
BO09861.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11477589..11477791 | 10..215 | 98 | -> | Plus |
X | 11478384..11478581 | 216..413 | 100 | -> | Plus |
X | 11479014..11479196 | 414..596 | 100 | -> | Plus |
X | 11481525..11481863 | 597..936 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:44:50 Download gff for
BO09861.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11371622..11371824 | 10..215 | 98 | -> | Plus |
arm_X | 11372417..11372614 | 216..413 | 100 | -> | Plus |
arm_X | 11373047..11373229 | 414..596 | 100 | -> | Plus |
arm_X | 11375558..11375896 | 597..936 | 98 | | Plus |
BO09861.complete Sequence
1756 bp (1756 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631598
> BO09861.complete
GAAGTTATCAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCT
CACCCAGCAGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGG
TACATCTACTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACG
ACTGCCGGGACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGA
TTGGACCCGCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCT
TTCGAGCACATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCAT
CTACGATCCGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCG
ACAAGGCATCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTG
CTGATCAGCACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACC
CACATTCCATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGA
ACTCGCGTAATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTT
GATTGCCATGATTACATGAGCGAGGCAACCGTGGAGATTCTATTGGAGAC
TGCGATGGGTGTGTCGAAGAAAACGCAGGACAAATCGGGATTCGAGTATG
CGATGGCCGTGATGCGGATGTGCGACATCCTTCACGCCCGCCATCGGAGC
ATCTTTCTGCGCAACGAGTTCGTGTTCACCCTGACGCGCTACTACAAGGA
GCAGGGTCGCCTGCTGAACATCATCCACGGCCTGACCACCAAGGTGATCC
GCAGCAAGAAGGCGGCCTTTGAGCAGGGCACCCGTGGATCCCTTGCCCAG
TGCGAGCTGAAGGCAGCCGCCTTAGAGCGGGAACGGGAACAGAATGGTGG
TGTTGACCAGACCCCATCAACAGCTGGCAGCGATGAGAAGGATCGGGAGA
AGGATAAGGAGAAGGCCAGTCCGGTGGCGGGACTGTCCTATGGACAGTCG
GCTGGTCTCAAGGATGACCTGGATGTGGAGGACAATGATATTGGTGAGAA
GAAGCGGCTGGCCTTCCTTGATTTGATGCTCGAAAGTGCACAGAATGGAG
CACTCATTACGGACACGGAAATTAAGGAGCAGGTGGACACGATCATGTTC
GAGGGACACGACACCACGGCAGCCGGCTCCTCGTTCTTTCTCTCGCTGAT
GGGCATCCACCAGGACATCCAGGATCGCGTACTGGCCGAACTCGACTCCA
TTTTTGGCGACTCCCAGCGACCGGCCACATTTCAGGACACACTGGAGATG
AAGTATCTGGAGCGGTGTCTGATGGAGACGCTGCGCATGTACCCACCCGT
TCCATTGATCGCCCGCGAGCTGCAGGAGGATCTCAAGCTGAACTCGGGCA
ACTACGTGATTCCCAGGGGCGCCACGGTGACGGTGGCCACCGTCCTGCTC
CATCGCAATCCGAAGGTCTACGCCAATCCCAACGTCTTCGATCCGGACAA
CTTCCTGCCGGAGCGCCAGGCCAATCGCCACTACTACGCCTTTGTGCCGT
TCTCTGCGGGACCACGCAGCTGTGTGGGGCGCAAGTATGCGATGCTCAAG
CTGAAGATCCTACTGTCGACCATTTTGCGGAACTACCGTGTCTACTCGGA
CCTGACCGAATCGGACTTCAAACTGCAGGCGGACATCATCCTAAAGCGTG
AGGAGGGATTCCGCGTGCGCCTCCAGCCGCGGACCAGTGCAAGCTTTCTA
GACCAT
BO09861.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:25:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-RC | 1725 | CG11715-PC | 1..1722 | 17..1738 | 8610 | 100 | Plus |
Cyp4g15-RA | 1725 | CG11715-PA | 1..1722 | 17..1738 | 8610 | 100 | Plus |
Cyp4g1-RA | 1671 | CG3972-PA | 1385..1629 | 1467..1711 | 325 | 75.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:25:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-RC | 2632 | CG11715-RC | 536..2257 | 17..1738 | 8610 | 100 | Plus |
Cyp4g15-RA | 2505 | CG11715-RA | 536..2257 | 17..1738 | 8610 | 100 | Plus |
Cyp4g1-RA | 2279 | CG3972-RA | 1492..1736 | 1467..1711 | 325 | 75.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:25:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11481524..11482214 | 596..1286 | 3455 | 100 | Plus |
X | 23542271 | X | 11482303..11482602 | 1279..1578 | 1485 | 99.7 | Plus |
X | 23542271 | X | 11478384..11478583 | 216..415 | 1000 | 100 | Plus |
X | 23542271 | X | 11477593..11477791 | 17..215 | 995 | 100 | Plus |
X | 23542271 | X | 11479011..11479196 | 411..596 | 930 | 100 | Plus |
X | 23542271 | X | 11482697..11482858 | 1577..1738 | 810 | 100 | Plus |
X | 23542271 | X | 467600..467844 | 1711..1467 | 325 | 75.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:25:47 has no hits.
BO09861.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:58:39 Download gff for
BO09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 1..1725 | 17..1741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:16:21 Download gff for
BO09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 509..2238 | 10..1742 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:41:03 Download gff for
BO09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 536..2257 | 17..1740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:58:39 Download gff for
BO09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 509..2238 | 10..1742 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:07:29 Download gff for
BO09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 536..2257 | 17..1740 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:07:29 Download gff for
BO09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11482698..11482858 | 1578..1740 | 98 | | Plus |
X | 11477593..11477791 | 17..215 | 100 | -> | Plus |
X | 11478384..11478581 | 216..413 | 100 | -> | Plus |
X | 11479014..11479196 | 414..596 | 100 | -> | Plus |
X | 11481525..11482213 | 597..1285 | 100 | -> | Plus |
X | 11482310..11482601 | 1286..1577 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:41:03 Download gff for
BO09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11371626..11371824 | 17..215 | 100 | -> | Plus |
arm_X | 11372417..11372614 | 216..413 | 100 | -> | Plus |
arm_X | 11373047..11373229 | 414..596 | 100 | -> | Plus |
arm_X | 11375558..11376246 | 597..1285 | 100 | -> | Plus |
arm_X | 11376343..11376634 | 1286..1577 | 100 | -> | Plus |
arm_X | 11376731..11376891 | 1578..1740 | 98 | | Plus |
BO09861.pep Sequence
Translation from 16 to 1756
> BO09861.pep
MEVLKKDAALGSPSSVFYFLLLPTLVLWYIYWRLSRAHLYRLAGRLPGPR
GLPIVGHLFDVIGPASSVFRTVIRKSAPFEHIAKMWIGPKLVVFIYDPRD
VELLLSSHVYIDKASEYKFFKPWLGDGLLISTGQKWRSHRKLIAPTFHLN
VLKSFIELFNENSRNVVRKLRAEDGRTFDCHDYMSEATVEILLETAMGVS
KKTQDKSGFEYAMAVMRMCDILHARHRSIFLRNEFVFTLTRYYKEQGRLL
NIIHGLTTKVIRSKKAAFEQGTRGSLAQCELKAAALEREREQNGGVDQTP
STAGSDEKDREKDKEKASPVAGLSYGQSAGLKDDLDVEDNDIGEKKRLAF
LDLMLESAQNGALITDTEIKEQVDTIMFEGHDTTAAGSSFFLSLMGIHQD
IQDRVLAELDSIFGDSQRPATFQDTLEMKYLERCLMETLRMYPPVPLIAR
ELQEDLKLNSGNYVIPRGATVTVATVLLHRNPKVYANPNVFDPDNFLPER
QANRHYYAFVPFSAGPRSCVGRKYAMLKLKILLSTILRNYRVYSDLTESD
FKLQADIILKREEGFRVRLQPRTSASFLDH
BO09861.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:17:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-PC | 574 | CG11715-PC | 1..574 | 1..574 | 2957 | 100 | Plus |
Cyp4g15-PA | 574 | CG11715-PA | 1..574 | 1..574 | 2957 | 100 | Plus |
Cyp4g1-PA | 556 | CG3972-PA | 8..554 | 2..576 | 1369 | 48 | Plus |
Cyp4c3-PA | 535 | CG1438-PA | 27..534 | 12..572 | 972 | 35.7 | Plus |
Cyp4s3-PA | 495 | CG9081-PA | 4..488 | 20..572 | 770 | 33.8 | Plus |