Clone BO09861 Report

Search the DGRC for BO09861

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:98
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptCyp4g15-RA
Protein status:BO09861.pep: validated full length
Sequenced Size:1756

Clone Sequence Records

BO09861.3prime Sequence

906 bp (851 high quality bases) assembled on 2006-04-19

> BO09861.3prime
ATGGTCTAGAAAGCTTGCACTGGTCCGCGGCTGGAGGCGCACGCGGAATC
CCTCCTCACGCTTTAGGATGATGTCCGCCTGCAGTTTGAAGTCCGATTCG
GTCAGGTCCGAGTAGACACGGTAGTTCCGCAAAATGGTCGACAGTAGGAT
CTTCAGCTTGAGCATCGCATACTTGCGCCCCACACAGCTGCGTGGTCCCG
CAGAGAACGGCACAAAGGCGTAGTAGTGGCGATTGGCCTGGCGCTCCGGC
AGGAAGTTGTCCGGATCGAAGACGTTGGGATTGGCGTAGACCTTCGGATT
GCGATGGAGCAGGACGGTGGCCACCGTCACCGTGGCGCCCCTGGGAATCA
CGTAGTTGCCCGAGTTCAGCTTGAGATCCTCCTGCAGCTCGCGGGCGATC
AATGGAACGGGTGGGTACATGCGCAGCGTCTCCATCAGACACCGCTCCAG
ATACTTCATCTCCAGTGTGTCCTGAAATGTGGCCGGTCGCTGGGAGTCGC
CAAAAATGGAGTCGAGTTCGGCCAGTACGCGATCCTGGATGTCCTGGTGG
ATGCCCATCAGCGAGAGAAAGAACGAGGAGCCGGCTGCCGTGGTGTCGTG
TCCCTCGAACATGATCGTGTCCACCTGCTCCTTAATTTCCGTGTCCGTAA
TGAGTGCTCCATTCTGTGCACTTTCGAGCATCAAATCAAGGAAGGCCAGC
CGCTTCTTCTCACCAATATCATTGTCCTCCACATCCAGGTCATCCTTGAG
ACCAGCCGACTGTCCATAGGACAGTCCCGCCACCGGACTGGCCTTCTCCT
TATCCTTCTCCCGATCCTTCTCATCGCTGCCAGCTGTTGATGGGGTCTGG
TCAACCCACCATTCTGTTCCCGTTCCCGCTCTAAGGCGGCTGCCTTCAGC
TCGCAC

BO09861.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:51:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG11715-PA 1725 Cyp4g15-RA 886..1722 855..19 4185 100 Minus
CG11715-PB 1137 Cyp4g15-RB 298..1134 855..19 4185 100 Minus
CG11715-PA 1725 Cyp4g15-RA 834..884 906..856 255 100 Minus
CG11715-PB 1137 Cyp4g15-RB 246..296 906..856 255 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:01:57
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-RC 2632 CG11715-RC 1369..2257 906..19 4420 99.9 Minus
Cyp4g15-RA 2505 CG11715-RA 1369..2257 906..19 4420 99.9 Minus
Cyp4g1-RA 2279 CG3972-RA 1492..1736 290..46 325 76.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11481778..11482214 906..471 2135 99.8 Minus
X 23542271 X 11482303..11482602 478..179 1485 99.7 Minus
X 23542271 X 11482697..11482858 180..19 810 100 Minus
X 23542271 X 467600..467844 46..290 325 75.5 Plus
Blast to na_te.dros performed on 2015-02-10 18:01:53 has no hits.

BO09861.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:23:15 Download gff for BO09861.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11715-PB 246..1137 16..906 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:31:24 Download gff for BO09861.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11715-PB 246..1137 16..906 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:10:07 Download gff for BO09861.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 1369..2261 15..906 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:10:22 Download gff for BO09861.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 1369..2261 15..906 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:10:22 Download gff for BO09861.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11481778..11482213 472..906 99 -> Minus
X 11482310..11482601 180..471 100 -> Minus
X 11482698..11482862 15..179 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:10:07 Download gff for BO09861.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11375811..11376246 472..906 99 -> Minus
arm_X 11376343..11376634 180..471 100 -> Minus
arm_X 11376731..11376895 15..179 98   Minus

BO09861.5prime Sequence

936 bp (807 high quality bases) assembled on 2006-04-19

> BO09861.5prime
GAAGTTATCAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCT
CACCCAGCAGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGG
TACATCTACTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACG
ACTGCCGGGACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGA
TTGGACCCGCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCT
TTCGAGCACATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCAT
CTACGATCCGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCG
ACAAGGCATCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTG
CTGATCAGCACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACC
CACATTCCATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGA
ACTCGCGTAATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTT
GATTGCCATGATTACATGAGCGAGGCAACCGTGGAGATTCTATTGGAGAC
TGCGATGGGTGTGTCGAAGAAAACGCAGGACAAATCGGGATTCGAGTATG
CGATGGCCGTGATGCGGATGTGCGACATCCTTCACGCCCGCCATCGGAGC
ATCTTTCTGCGCAACGAGTTCGTGTTCACCCTGACGCGCTACTACAAGGA
GCANGGTCGCCTGCTGAACATCATCCACGGCCTGACCACCAAGGTGATCC
GCAGCAAGAAGGCGGCCTTTGAGCAGGGCACCCGTGGATCCCTTGCCCAG
TGCGAGCTGAGGGCAGCCGCCTTAGAGCGGGGACGGGAAACAGAATGGTG
GTGTTGACCAGACCCCATCAACAGCTGGCAGCGATG

BO09861.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:51:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG11715-PA 1725 Cyp4g15-RA 1..873 17..889 4296 99.6 Plus
CG11715-PB 1137 Cyp4g15-RB 1..285 605..889 1356 98.9 Plus
CG11715-PA 1725 Cyp4g15-RA 872..919 889..936 240 100 Plus
CG11715-PB 1137 Cyp4g15-RB 284..331 889..936 240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-RC 2632 CG11715-RC 536..1454 17..936 4534 99.6 Plus
Cyp4g15-RA 2505 CG11715-RA 536..1454 17..936 4534 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:25:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11481524..11481863 596..936 1614 98.8 Plus
X 23542271 X 11478384..11478583 216..415 1000 100 Plus
X 23542271 X 11477593..11477791 17..215 995 100 Plus
X 23542271 X 11479011..11479196 411..596 930 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:25:52 has no hits.

BO09861.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:23:16 Download gff for BO09861.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11715-PA 1..919 17..936 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:31:25 Download gff for BO09861.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11715-PA 1..919 17..936 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:44:50 Download gff for BO09861.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 532..1454 10..936 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:30:48 Download gff for BO09861.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 532..1454 10..936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:30:48 Download gff for BO09861.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11477589..11477791 10..215 98 -> Plus
X 11478384..11478581 216..413 100 -> Plus
X 11479014..11479196 414..596 100 -> Plus
X 11481525..11481863 597..936 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:44:50 Download gff for BO09861.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11371622..11371824 10..215 98 -> Plus
arm_X 11372417..11372614 216..413 100 -> Plus
arm_X 11373047..11373229 414..596 100 -> Plus
arm_X 11375558..11375896 597..936 98   Plus

BO09861.complete Sequence

1756 bp (1756 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631598

> BO09861.complete
GAAGTTATCAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCT
CACCCAGCAGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGG
TACATCTACTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACG
ACTGCCGGGACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGA
TTGGACCCGCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCT
TTCGAGCACATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCAT
CTACGATCCGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCG
ACAAGGCATCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTG
CTGATCAGCACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACC
CACATTCCATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGA
ACTCGCGTAATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTT
GATTGCCATGATTACATGAGCGAGGCAACCGTGGAGATTCTATTGGAGAC
TGCGATGGGTGTGTCGAAGAAAACGCAGGACAAATCGGGATTCGAGTATG
CGATGGCCGTGATGCGGATGTGCGACATCCTTCACGCCCGCCATCGGAGC
ATCTTTCTGCGCAACGAGTTCGTGTTCACCCTGACGCGCTACTACAAGGA
GCAGGGTCGCCTGCTGAACATCATCCACGGCCTGACCACCAAGGTGATCC
GCAGCAAGAAGGCGGCCTTTGAGCAGGGCACCCGTGGATCCCTTGCCCAG
TGCGAGCTGAAGGCAGCCGCCTTAGAGCGGGAACGGGAACAGAATGGTGG
TGTTGACCAGACCCCATCAACAGCTGGCAGCGATGAGAAGGATCGGGAGA
AGGATAAGGAGAAGGCCAGTCCGGTGGCGGGACTGTCCTATGGACAGTCG
GCTGGTCTCAAGGATGACCTGGATGTGGAGGACAATGATATTGGTGAGAA
GAAGCGGCTGGCCTTCCTTGATTTGATGCTCGAAAGTGCACAGAATGGAG
CACTCATTACGGACACGGAAATTAAGGAGCAGGTGGACACGATCATGTTC
GAGGGACACGACACCACGGCAGCCGGCTCCTCGTTCTTTCTCTCGCTGAT
GGGCATCCACCAGGACATCCAGGATCGCGTACTGGCCGAACTCGACTCCA
TTTTTGGCGACTCCCAGCGACCGGCCACATTTCAGGACACACTGGAGATG
AAGTATCTGGAGCGGTGTCTGATGGAGACGCTGCGCATGTACCCACCCGT
TCCATTGATCGCCCGCGAGCTGCAGGAGGATCTCAAGCTGAACTCGGGCA
ACTACGTGATTCCCAGGGGCGCCACGGTGACGGTGGCCACCGTCCTGCTC
CATCGCAATCCGAAGGTCTACGCCAATCCCAACGTCTTCGATCCGGACAA
CTTCCTGCCGGAGCGCCAGGCCAATCGCCACTACTACGCCTTTGTGCCGT
TCTCTGCGGGACCACGCAGCTGTGTGGGGCGCAAGTATGCGATGCTCAAG
CTGAAGATCCTACTGTCGACCATTTTGCGGAACTACCGTGTCTACTCGGA
CCTGACCGAATCGGACTTCAAACTGCAGGCGGACATCATCCTAAAGCGTG
AGGAGGGATTCCGCGTGCGCCTCCAGCCGCGGACCAGTGCAAGCTTTCTA
GACCAT

BO09861.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:25:48
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-RC 1725 CG11715-PC 1..1722 17..1738 8610 100 Plus
Cyp4g15-RA 1725 CG11715-PA 1..1722 17..1738 8610 100 Plus
Cyp4g1-RA 1671 CG3972-PA 1385..1629 1467..1711 325 75.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-RC 2632 CG11715-RC 536..2257 17..1738 8610 100 Plus
Cyp4g15-RA 2505 CG11715-RA 536..2257 17..1738 8610 100 Plus
Cyp4g1-RA 2279 CG3972-RA 1492..1736 1467..1711 325 75.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11481524..11482214 596..1286 3455 100 Plus
X 23542271 X 11482303..11482602 1279..1578 1485 99.7 Plus
X 23542271 X 11478384..11478583 216..415 1000 100 Plus
X 23542271 X 11477593..11477791 17..215 995 100 Plus
X 23542271 X 11479011..11479196 411..596 930 100 Plus
X 23542271 X 11482697..11482858 1577..1738 810 100 Plus
X 23542271 X 467600..467844 1711..1467 325 75.5 Minus
Blast to na_te.dros performed on 2014-11-27 15:25:47 has no hits.

BO09861.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:58:39 Download gff for BO09861.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 1..1725 17..1741 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:16:21 Download gff for BO09861.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 509..2238 10..1742 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:41:03 Download gff for BO09861.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 536..2257 17..1740 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:58:39 Download gff for BO09861.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 509..2238 10..1742 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:07:29 Download gff for BO09861.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 536..2257 17..1740 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:07:29 Download gff for BO09861.complete
Subject Subject Range Query Range Percent Splice Strand
X 11482698..11482858 1578..1740 98   Plus
X 11477593..11477791 17..215 100 -> Plus
X 11478384..11478581 216..413 100 -> Plus
X 11479014..11479196 414..596 100 -> Plus
X 11481525..11482213 597..1285 100 -> Plus
X 11482310..11482601 1286..1577 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:41:03 Download gff for BO09861.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11371626..11371824 17..215 100 -> Plus
arm_X 11372417..11372614 216..413 100 -> Plus
arm_X 11373047..11373229 414..596 100 -> Plus
arm_X 11375558..11376246 597..1285 100 -> Plus
arm_X 11376343..11376634 1286..1577 100 -> Plus
arm_X 11376731..11376891 1578..1740 98   Plus

BO09861.pep Sequence

Translation from 16 to 1756

> BO09861.pep
MEVLKKDAALGSPSSVFYFLLLPTLVLWYIYWRLSRAHLYRLAGRLPGPR
GLPIVGHLFDVIGPASSVFRTVIRKSAPFEHIAKMWIGPKLVVFIYDPRD
VELLLSSHVYIDKASEYKFFKPWLGDGLLISTGQKWRSHRKLIAPTFHLN
VLKSFIELFNENSRNVVRKLRAEDGRTFDCHDYMSEATVEILLETAMGVS
KKTQDKSGFEYAMAVMRMCDILHARHRSIFLRNEFVFTLTRYYKEQGRLL
NIIHGLTTKVIRSKKAAFEQGTRGSLAQCELKAAALEREREQNGGVDQTP
STAGSDEKDREKDKEKASPVAGLSYGQSAGLKDDLDVEDNDIGEKKRLAF
LDLMLESAQNGALITDTEIKEQVDTIMFEGHDTTAAGSSFFLSLMGIHQD
IQDRVLAELDSIFGDSQRPATFQDTLEMKYLERCLMETLRMYPPVPLIAR
ELQEDLKLNSGNYVIPRGATVTVATVLLHRNPKVYANPNVFDPDNFLPER
QANRHYYAFVPFSAGPRSCVGRKYAMLKLKILLSTILRNYRVYSDLTESD
FKLQADIILKREEGFRVRLQPRTSASFLDH

BO09861.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-PC 574 CG11715-PC 1..574 1..574 2957 100 Plus
Cyp4g15-PA 574 CG11715-PA 1..574 1..574 2957 100 Plus
Cyp4g1-PA 556 CG3972-PA 8..554 2..576 1369 48 Plus
Cyp4c3-PA 535 CG1438-PA 27..534 12..572 972 35.7 Plus
Cyp4s3-PA 495 CG9081-PA 4..488 20..572 770 33.8 Plus