Clone Sequence Records
BO10031.3prime Sequence
949 bp (860 high quality bases) assembled on 2006-04-19
> BO10031.3prime
ATGGTCTAGAAAGCTTGCGGCCATATTACTGGGTCCAGCGCCCGGATCAT
CATCACCATCCGCGTTCTCTTTGGTCAAGTCGGAAAAAAAGTCAGATGCA
TTGCTGCATTTTGAGGAGGGCAGATTGTGACGCTGCTCCTTGTAGGCATT
GTGTTTCTCATTGTACTTGATATCTCCAAAGTCCTCGAAATACTTTACAT
TCCAGAATCGCACGTCGTTGTTGTGCGAGGATGATGCGATGAGCTCACCG
CTGGCATTCACGTCTAACGATTCGATGGGCATGTTATGCTGTCCCACAAC
GCCGAGATTACGATACGGAGCGATGTGACAAGCTCGAATGTTTCCATCCT
CTCCGGCGACGCAAGCAATCCGGTCTGTGATGGGGATCATTAGACTAATG
GGGCTCTTGATGCCCGGATACATGTCGCAGTGGTACCCAAATTGGCCCCA
GTTGTAGGTGTACAAGCGACCCTTGGAGGTACCAACCACCAGCTTGGAGT
CACCGCGGTAGACCCCCATGCAGTTCAGCTCCTCCTCGTACGGCTCCGAT
TGCACGTACATCTTCCGTGCGGATATATTAAATGTAGTCAGGTAGCCATC
GGCACTGGTGGCCAGCAGAAGCTTGCTTTGCTCGTTAGTCGTCAGCTGGG
TGATCTGATCTTCCAGTTCTTTTAGCTCGAAGATGGCGTTCTTGGTGCGC
AAATCCCACAGCTTGACCGTACCGGCATCATCGCCCGAGGCAAAGAGATT
TTCATTCAGAACGTGCAGCGTGTTGATGGCATCATCGTGGGCCGTCTCGT
ATAGCTTTTTTAGTTTCTCCGTTTCCATATCGGTGACCATCACGCACTTG
TCTTTGGAGCAGGTGAGCAGGAAGCGCCCATCCTCTGTGAACTCCACATC
GCGGCATGCTTTGGAATGAACCTCAATAGTGCGCAGCAGCTTGTTAGCC
BO10031.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:55:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14722-PA | 1497 | CG14722-RA | 564..1494 | 949..19 | 4655 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14722-RA | 2063 | CG14722-RA | 828..1758 | 949..19 | 4655 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:00:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11742792..11743722 | 949..19 | 4655 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:00:24 has no hits.
BO10031.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:28:19 Download gff for
BO10031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-PA | 564..1497 | 18..949 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:38:19 Download gff for
BO10031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-PA | 564..1497 | 18..949 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:39:29 Download gff for
BO10031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-RA | 828..1758 | 19..949 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:41:18 Download gff for
BO10031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-RA | 828..1758 | 19..949 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:41:18 Download gff for
BO10031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11742792..11743722 | 19..949 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:39:29 Download gff for
BO10031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7568514..7569444 | 19..949 | 100 | | Minus |
BO10031.5prime Sequence
855 bp (820 high quality bases) assembled on 2006-04-19
> BO10031.5prime
GAAGTTATCAGTCGACATGCACACTCATAACAACTTTAAAACCCCCTCCG
ACGAAGACGAACTAGATGATCTGGACGAGGACATGGTGGTGGGAGTAATA
GCGGAAATCGAACAGGAGGTGCTGAACGAGTCGGACAGCGACAACGACGA
ATATGACCTGGTAGACATGGGTGCTCCAGTGCCGGATAACGATGGCGACA
TTAGTTACGAAGGCAACGATAGTAGCAGCAGCGATGACAGTTTCGATCCA
AATGCAGCGGACTCCGATTCAGATGATTCAATGCTCGACGAGGCGGGTGG
TGTCACCGCCGGAGGAGCAACGAGTGCAAAGAAACGCAAGGATGACGATA
ATCCATCGGGCAGCAACAAGCAACCAGAAGCCACCTTCGACTTGGACGAG
GACGACGAAACAGACGAGACTGTACGTGCCATGATAGCAGCCATAAAGAA
GCCACGCAGTTCCCCTCCAGAGATTAAGCTGGAAGACTTTATAACAGATA
TCTGCTTTCATCCGGATCGCGACATCATCGCCTTGGCCACAATAATCGGG
GATGTACATTTGTACGAGTATGACAACGAGGCTAACAAGCTGCTGCGCAC
TATTGAGGTTCATTCCAAAGCATGCCGCGATGTGGAGTTCACAGAGGATG
GGCGCTTCCTGCTCACCTGCTCCAAAGACAAGTGCGTGATGGTCACCGAT
ATGGAAACGGAGAAACTAAAAAAGCTATACGAGACGGCCCACGATGATGC
CATCAACACGCTGCACGTTCTGAATGAAAATCTCTTTGCCTCGGGCGATG
ATGCCGGTACGGTCAAGCTGTGGGATTTGCGCACCAAGAACGCCATCTTC
GAGCT
BO10031.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:55:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14722-PA | 1497 | CG14722-RA | 1..839 | 17..855 | 4170 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:51:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14722-RA | 2063 | CG14722-RA | 265..1103 | 17..855 | 4180 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:51:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11742238..11743067 | 26..855 | 4150 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:51:05 has no hits.
BO10031.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:28:20 Download gff for
BO10031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-PA | 1..839 | 17..855 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:38:20 Download gff for
BO10031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-PA | 1..839 | 17..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:40:47 Download gff for
BO10031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-RA | 265..1103 | 17..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:25:38 Download gff for
BO10031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-RA | 265..1103 | 17..855 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:25:38 Download gff for
BO10031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11742233..11743067 | 19..855 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:40:47 Download gff for
BO10031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7567955..7568789 | 19..855 | 99 | | Plus |
BO10031.complete Sequence
1528 bp assembled on 2008-08-15
GenBank Submission: FJ631638
> BO10031.complete
GAAGTTATCAGTCGACATGCACACTCATAACAACTTTAAAACCCCCTCCG
ACGAAGACGAACTAGATGATCTGGACGAGGACATGGTGGTGGGAGTAATA
GCGGAAATCGAACAGGAGGTGCTGAACGAGTCGGACAGCGACAACGACGA
ATATGACCTGGTAGACATGGGTGCTCCAGTGCCGGATAACGATGGCGACA
TTAGTTACGAAGGCAACGATAGTAGCAGCAGCGATGACAGTTTCGATCCA
AATGCAGCGGACTCCGATTCAGATGATTCAATGCTCGACGAGGCGGGTGG
TGTCACCGCCGGAGGAGCAACGAGTGCAAAGAAACGCAAGGATGACGATA
ATCCATCGGGCAGCAACAAGCAACCAGAAGCCACCTTCGACTTGGACGAG
GACGACGAAACAGACGAGACTGTACGTGCCATGATAGCAGCCATAAAGAA
GCCACGCAGTTCCCCTCCAGAGATTAAGCTGGAAGACTTTATAACAGATA
TCTGCTTTCATCCGGATCGCGACATCATCGCCTTGGCCACAATAATCGGG
GATGTACATTTGTACGAGTATGACAACGAGGCTAACAAGCTGCTGCGCAC
TATTGAGGTTCATTCCAAAGCATGCCGCGATGTGGAGTTCACAGAGGATG
GGCGCTTCCTGCTCACCTGCTCCAAAGACAAGTGCGTGATGGTCACCGAT
ATGGAAACGGAGAAACTAAAAAAGCTATACGAGACGGCCCACGATGATGC
CATCAACACGCTGCACGTTCTGAATGAAAATCTCTTTGCCTCGGGCGATG
ATGCCGGTACGGTCAAGCTGTGGGATTTGCGCACCAAGAACGCCATCTTC
GAGCTAAAAGAACTGGAAGATCAGATCACCCAGCTGACGACTAACGAGCA
AAGCAAGCTTCTGCTGGCCACCAGTGCCGATGGCTACCTGACTACATTTA
ATATATCCGCACGGAAGATGTACGTGCAATCGGAGCCGTACGAGGAGGAG
CTGAACTGCATGGGGGTCTACCGCGGTGACTCCAAGCTGGTGGTTGGTAC
CTCCAAGGGTCGCTTGTACACCTACAACTGGGGCCAATTTGGGTACCACT
GCGACATGTATCCGGGCATCAAGAGCCCCATTAGTCTAATGATCCCCATC
ACAGACCGGATTGCTTGCGTCGCCGGAGAGGATGGAAACATTCGAGCTTG
TCACATCGCTCCGTATCGTAATCTCGGCGTTGTGGGACAGCATAACATGC
CCATCGAATCGTTAGACGTGAATGCCAGCGGTGAGCTCATCGCATCATCC
TCGCACAACAACGACGTGCGATTCTGGAATGTAAAGTATTTCGAGGACTT
TGGAGATATCAAGTACAATGAGAAACACAATGCCTACAAGGAGCAGCGTC
ACAATCTGCCCTCCTCAAAATGCAGCAATGCATCTGACTTTTTTTCCGAC
TTGACCAAAGAGAACGCGGATGGTGATGATGATCCGGGCGCTGGACCCAG
TAATATGGCCGCAAGCTTTCTAGACCAT
BO10031.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:46:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14722-RA | 1497 | CG14722-PA | 1..1494 | 17..1510 | 7455 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:46:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14722-RA | 2063 | CG14722-RA | 265..1758 | 17..1510 | 7455 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:46:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11742238..11743722 | 26..1510 | 7425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:46:23 has no hits.
BO10031.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:43:50 Download gff for
BO10031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-RA | 293..1786 | 17..1510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:32:49 Download gff for
BO10031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-RA | 265..1758 | 17..1512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:55 Download gff for
BO10031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-RA | 293..1786 | 17..1512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:52:29 Download gff for
BO10031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14722-RA | 265..1758 | 17..1512 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:52:29 Download gff for
BO10031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11742229..11743722 | 17..1512 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:32:49 Download gff for
BO10031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7567951..7569444 | 17..1512 | 99 | | Plus |
BO10031.pep Sequence
Translation from 16 to 1528
> BO10031.pep
MHTHNNFKTPSDEDELDDLDEDMVVGVIAEIEQEVLNESDSDNDEYDLVD
MGAPVPDNDGDISYEGNDSSSSDDSFDPNAADSDSDDSMLDEAGGVTAGG
ATSAKKRKDDDNPSGSNKQPEATFDLDEDDETDETVRAMIAAIKKPRSSP
PEIKLEDFITDICFHPDRDIIALATIIGDVHLYEYDNEANKLLRTIEVHS
KACRDVEFTEDGRFLLTCSKDKCVMVTDMETEKLKKLYETAHDDAINTLH
VLNENLFASGDDAGTVKLWDLRTKNAIFELKELEDQITQLTTNEQSKLLL
ATSADGYLTTFNISARKMYVQSEPYEEELNCMGVYRGDSKLVVGTSKGRL
YTYNWGQFGYHCDMYPGIKSPISLMIPITDRIACVAGEDGNIRACHIAPY
RNLGVVGQHNMPIESLDVNASGELIASSSHNNDVRFWNVKYFEDFGDIKY
NEKHNAYKEQRHNLPSSKCSNASDFFSDLTKENADGDDDPGAGPSNMAAS
FLDH
BO10031.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:33:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14722-PA | 498 | CG14722-PA | 1..498 | 1..498 | 2633 | 100 | Plus |
| CG1523-PA | 621 | CG1523-PA | 53..165 | 205..316 | 166 | 32.7 | Plus |
