Clone BO10096 Report

Search the DGRC for BO10096

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:100
Well:96
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO10096.pep: Imported from assembly
Sequenced Size:880

Clone Sequence Records

BO10096.3prime Sequence

833 bp (798 high quality bases) assembled on 2006-04-19

> BO10096.3prime
ATGGTCTAGAAAGCTTGCGCTGCTCCAAGGTGCTAGCCTCCGCCTCTGTC
TCGTCTTCTGGCGCCGCAGCGCTTCCATGGGGGGAGTGGGCCAGGAATCT
ACAGTATCGCCGGAAGCGTATCCCCAAACGACTGACCATGCCTCTCTCTC
GTTCTCTGTGTGTTGTCGCTTCGGCTGCTCTCGAACACGCTTCCAGTGCC
TCGAACGTTGCAGAACTGCACTCCTCCACATCTCTTCCAGGCGATCTTCC
TCTGGAAATGGCATCGGCACCGTCACTAACTTTCCACCCGGCTCCGTTGT
TGTCGTTGTTATTGTTGTGGGAAATGGAAAGGAGCGCCGTGCTGCTGCTG
CTGGCATTGTTGTTGTCGTAGATTTGGTTGTTGTTGCTGTGATTGCGCTG
CTCTCATGACCGCTTACCGCTATCCTTGCGAAAGGACTTGCGCAGCTTGT
CGACCAAACGCAAATGAAACTTCGTATAATCATTTGAAGATTCAACAGCA
GCAGCTGCAGCGGCCGACTGTTGTTGCTTTTGATTAATCGCGGCTGCCTG
GGCGGCCGCCTGCCTTTCCAGTGCGGATGCGGTGTGCGAGCGGCTGGGCG
GACTACTGCGCGTGGGCGACACCATTTGCTGCAGCGAACCGTGCGAACTG
CGCGATGCGTTGCGTGGAAAAGCGCGCGAACTGTGGCAGCGCTGCATTTG
CATCCTTTGGTGGGGGGAGGACACGCCCAGTTGACCGTGCGATGGTGAGG
TGGCGAAGCTCTCCGACTTGCATTCGGACACCTTGCGGCGTCGCTGTTGT
TGTTGTCCCTGGGCGGGCGTTCCAAGAGCGGTG

BO10096.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:56:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15893-PA 849 CG15893-RA 32..846 833..19 4050 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:46:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG42240-RC 2187 CG42240-RC 329..1143 833..19 4060 99.9 Minus
CG42240-RA 1909 CG42240-RA 329..1143 833..19 4060 99.9 Minus
CG42240-RB 1909 CG42240-RB 329..1143 833..19 4060 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:46:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6331170..6331984 833..19 4060 99.9 Minus
Blast to na_te.dros performed 2015-02-11 11:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2411 396..294 188 67.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2399..2511 404..296 159 62.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1567 389..340 151 78 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2463..2627 389..232 149 58.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2359..2469 402..296 148 63.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6751..6816 404..340 147 71.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2427 396..296 145 60.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6842 404..296 139 62.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2644 388..340 137 75.5 Minus
roo 9092 roo DM_ROO 9092bp 1070..1146 415..340 130 64.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6772..6883 404..294 125 58 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6774 389..340 124 72 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2387..2480 390..294 117 62.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1542..1587 389..344 113 71.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6820..6882 404..340 113 68.2 Minus
rover 7318 rover ROVER 7318bp 1257..1293 382..346 113 78.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6807..6917 402..296 111 60.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6855..6918 402..340 110 65.6 Minus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2637..2685 395..347 110 69.4 Minus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2629..2719 385..297 108 59.3 Minus

BO10096.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:30:04 Download gff for BO10096.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15893-PA 32..849 16..833 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:40:36 Download gff for BO10096.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15893-PA 32..849 16..833 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:18:29 Download gff for BO10096.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42240-RB 329..1143 19..833 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:02:05 Download gff for BO10096.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42240-RB 329..1143 19..833 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:02:05 Download gff for BO10096.3prime
Subject Subject Range Query Range Percent Splice Strand
X 6331170..6331984 19..833 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:18:29 Download gff for BO10096.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6225203..6226017 19..833 99   Minus

BO10096.5prime Sequence

841 bp (753 high quality bases) assembled on 2006-04-19

> BO10096.5prime
GAAGTTATCAGTCGACATGCGAGTAGTAACGGTACAACGGCTTTGGCCAC
CGCTCTTGGAACGCCCGCCCAGGGACAACAACAACAGCGACGCCGCAAGG
TGTCCGAATGCAAGTCGGAGAGCTTCGCCACCTCACCATCGCACGGTCAA
CTGGGCGTGTCCTCCCCCCACCAAAGGATGCAAATGCAGCGCTGCCACAG
TTCGCGCGCTTTTCCACGCAACGCATCGCGCAGTTCGCACGGTTCGCTGC
AGCAAATGGTGTCGCCCACGCGCAGTAGTCCGCCCAGCCGCTCGCACACC
GCATCCGCACTGGAAAGGCAGGCGGCCGCCCAGGCAGCCGCGATTAATCA
AAAGCAACAACAGTCGGCCGCTGCAGCTGCTGCTGTTGAATCTTCAAATG
ATTATACGAAGTTTCATTTGCGTTTGGTCGACAAGCTGCGCAAGTCCTTT
CGCAAGGATAGCGGTAAGCGGTCATGAGAGCAGCGCAATCACAGCAACAA
CAACCAAATCTACGACAACAACAATGCCAGCAGCAGCAGCACGGCGCTCC
TTTCCATTTCCCACAACAATAACAACGACAACAACGGAGCCGGGTGGAAA
GTTAGTGACGGTGCCGATGCCATTTCCAGAGGAAGATCGCCTGGAAGAGA
TGTGGAGGAGTGCAGTTCTGCAACGTTCGAGGCACTGGAAGCGTGTTCGA
GAGCAGCCGAAGCGACAACACACAGAGAACGAGAGAGAGGCATGGTCAGT
CGTTTGGGGATACGCTTCCGGCGATACTGTAGATTCCTGGCCCACTCCCC
CCATGGAAGCGCTGCGGCGCCAGAAGACGAGACAGAGGCGG

BO10096.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:56:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15893-PA 849 CG15893-RA 1..825 17..841 4125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:13:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG42240-RC 2187 CG42240-RC 298..1122 17..841 4125 100 Plus
CG42240-RA 1909 CG42240-RA 298..1122 17..841 4125 100 Plus
CG42240-RB 1909 CG42240-RB 298..1122 17..841 4125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:13:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6331139..6331963 17..841 4125 100 Plus
Blast to na_te.dros performed 2015-02-12 00:13:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2411 485..587 188 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2399..2511 477..585 159 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1567 492..541 151 78 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2463..2627 492..649 149 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2359..2469 479..585 148 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6751..6816 477..541 147 71.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2427 485..585 145 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6842 477..585 139 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2644 493..541 137 75.5 Plus
roo 9092 roo DM_ROO 9092bp 1070..1146 466..541 130 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6772..6883 477..587 125 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6774 492..541 124 72 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2387..2480 491..587 117 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1542..1587 492..537 113 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6820..6882 477..541 113 68.2 Plus
rover 7318 rover ROVER 7318bp 1257..1293 499..535 113 78.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6807..6917 479..585 111 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6855..6918 479..541 110 65.6 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2637..2685 486..534 110 69.4 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2629..2719 496..584 108 59.3 Plus

BO10096.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:30:05 Download gff for BO10096.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15893-PA 1..825 17..841 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:40:38 Download gff for BO10096.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15893-PA 1..825 17..841 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:13:42 Download gff for BO10096.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42240-RB 290..1122 7..841 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:04:02 Download gff for BO10096.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42240-RB 290..1122 7..841 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:04:02 Download gff for BO10096.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6331131..6331963 7..841 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:13:42 Download gff for BO10096.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6225164..6225996 7..841 99   Plus

BO10096.complete Sequence

880 bp assembled on 2008-08-15

> BO10096.complete
GAAGTTATCAGTCGACATGCGAGTAGTAACGGTACAACGGCTTTGGCCAC
CGCTCTTGGAACGCCCGCCCAGGGACAACAACAACAGCGACGCCGCAAGG
TGTCCGAATGCAAGTCGGAGAGCTTCGCCACCTCACCATCGCACGGTCAA
CTGGGCGTGTCCTCCCCCCACCAAAGGATGCAAATGCAGCGCTGCCACAG
TTCGCGCGCTTTTCCACGCAACGCATCGCGCAGTTCGCACGGTTCGCTGC
AGCAAATGGTGTCGCCCACGCGCAGTAGTCCGCCCAGCCGCTCGCACACC
GCATCCGCACTGGAAAGGCAGGCGGCCGCCCAGGCAGCCGCGATTAATCA
AAAGCAACAACAGTCGGCCGCTGCAGCTGCTGCTGTTGAATCTTCAAATG
ATTATACGAAGTTTCATTTGCGTTTGGTCGACAAGCTGCGCAAGTCCTTT
CGCAAGGATAGCGGTAAGCGGTCATGAGAGCAGCGCAATCACAGCAACAA
CAACCAAATCTACGACAACAACAATGCCAGCAGCAGCAGCACGGCGCTCC
TTTCCATTTCCCACAACAATAACAACGACAACAACGGAGCCGGGTGGAAA
GTTAGTGACGGTGCCGATGCCATTTCCAGAGGAAGATCGCCTGGAAGAGA
TGTGGAGGAGTGCAGTTCTGCAACGTTCGAGGCACTGGAAGCGTGTTCGA
GAGCAGCCGAAGCGACAACACACAGAGAACGAGAGAGAGGCATGGTCAGT
CGTTTGGGGATACGCTTCCGGCGATACTGTAGATTCCTGGCCCACTCCCC
CCATGGAAGCGCTGCGGCGCCAGAAGACGAGACAGAGGCGGAGGCTAGCA
CCTTGGAGCAGCGCAAGCTTTCTAGACCAT

BO10096.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG42240-RB 1041 CG42240-PB 83..928 17..862 4215 99.9 Plus
CG42240-RC 543 CG42240-PC 83..543 17..477 2305 100 Plus
CG42240-RA 543 CG42240-PA 83..543 17..477 2305 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG42240-RC 2187 CG42240-RC 298..1143 17..862 4215 99.9 Plus
CG42240-RA 1909 CG42240-RA 298..1143 17..862 4215 99.9 Plus
CG42240-RB 1909 CG42240-RB 298..1143 17..862 4215 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6331139..6331984 17..862 4215 99.9 Plus
Blast to na_te.dros performed 2014-11-26 15:48:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2411 485..587 188 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2399..2511 477..585 159 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1567 492..541 151 78 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2463..2627 492..649 149 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2359..2469 479..585 148 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6751..6816 477..541 147 71.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2427 485..585 145 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6842 477..585 139 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2644 493..541 137 75.5 Plus
roo 9092 roo DM_ROO 9092bp 1070..1146 466..541 130 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6772..6883 477..587 125 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6774 492..541 124 72 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2387..2480 491..587 117 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1542..1587 492..537 113 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6820..6882 477..541 113 68.2 Plus
rover 7318 rover ROVER 7318bp 1257..1293 499..535 113 78.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6807..6917 479..585 111 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6855..6918 479..541 110 65.6 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2637..2685 486..534 110 69.4 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2629..2719 496..584 108 59.3 Plus

BO10096.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:47:04 Download gff for BO10096.complete
Subject Subject Range Query Range Percent Splice Strand
CG42240-RA 274..1127 7..862 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:06 Download gff for BO10096.complete
Subject Subject Range Query Range Percent Splice Strand
CG42240-RB 298..1143 17..864 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:59:10 Download gff for BO10096.complete
Subject Subject Range Query Range Percent Splice Strand
CG42240-RA 282..1127 17..864 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:52 Download gff for BO10096.complete
Subject Subject Range Query Range Percent Splice Strand
CG42240-RB 298..1143 17..864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:52 Download gff for BO10096.complete
Subject Subject Range Query Range Percent Splice Strand
X 6331139..6331984 17..864 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:06 Download gff for BO10096.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6225172..6226017 17..864 99   Plus

BO10096.pep Sequence

Translation from 16 to 880

> BO10096.pep
MRVVTVQRLWPPLLERPPRDNNNSDAARCPNASRRASPPHHRTVNWACPP
PTKGCKCSAATVRALFHATHRAVRTVRCSKWCRPRAVVRPAARTPHPHWK
GRRPPRQPRLIKSNNSRPLQLLLLNLQMIIRSFICVWSTSCASPFARIAV
SGHESSAITATTTKSTTTTMPAAAARRSFPFPTTITTTTTEPGGKLVTVP
MPFPEEDRLEEMWRSAVLQRSRHWKRVREQPKRQHTENEREAWSVVWGYA
SGDTVDSWPTPPMEALRRQKTRQRRRLAPWSSASFLDH
Sequence BO10096.pep has no blast hits.