Clone BO10115 Report

Search the DGRC for BO10115

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:101
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptAnxb11-RA
Protein status:BO10115.pep: Imported from assembly
Sequenced Size:1000

Clone Sequence Records

BO10115.3prime Sequence

953 bp (869 high quality bases) assembled on 2006-04-19

> BO10115.3prime
ATGGTCTAGAAAGCTTGCAGAGGAGCGCTGTTCACCCACCAGGGCATAAA
GGGCGTGCTTGTAGTGGCCCGAAGTATCGCCCTTGATCCAGCTCTTGAGG
GACTTGCCGTACAGACGTTCGAACGCTACCTTAATGTCCGTCATATCAAT
CTCGCTGCGCGTGATGATCACACGGATCAACTGGGTGTCATTGGTGCCAA
TTCCGGCCATCGCCTTGTGCAGGCGCGAAGCGAAGTATTCGGCCTTGTTG
GTGACGCACCTGTAGATGGCAATCAGGCCCTCCATCACATCGCCGGAGAA
CTCCTTCTTGATCGCCTTCTCCAGCGAGTGGCCAGTCATGCCCTCGTACT
CTTGGAATATCAGTTTCAATTGCTGATAGTTCCTCTGGCAGAGGATCATG
TTGAACATGCTCTCATCGGTGCCGACGCGCAGTTCGCCGGCTTTCAGTAG
CTCCCTAGCATCGTTCTTGGCCGCCACGGGATCCACGCGACCACTCTCAT
CCCGCGCCGCCGTGCACAAGGAGGTGAGCAGCCGCTTAAAGTTGCCCGAC
GTCTCCGACTTTAGTTCAGACTCCAAATGGGCGCCGTACAATCGTAAGTA
CTGGTTTTTGATCGTATTGATCTCCATGTTGGACAGCGTGCAGAGGATCT
CGATGAGGACCTCCTCGTCGGTGCCCAGGCCAGCCATGGCATCGTTTAGC
TCGGCGCAGTAGTAGTCCACGATGGGACGCAGCAGGCCGACGAGGAGTTT
CTCAAAGTTGCCGCTCGTCTCCGACTTGATGTCCTCGATGAGGTCCTTGC
CGAAGTGCGTCTTGAACTGGCGCTGGATCTCCTGGCGCTGCTCGTTGGAT
CGCCGACAGATGATGTTAATCAGAGCGTCCTCATCTGTTCCAAAGCCCTT
CATGGGCTTTGCGCAGTCGTGAGCATCCTTGACGGCATCGAAGTTTGCGG
CAG

BO10115.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:56:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG9968-PA 969 Anxb11-RA 80..966 905..19 4410 99.8 Minus
CG9968-PB 1536 Anxb11-RB 647..1533 905..19 4410 99.8 Minus
CG9968-PA 969 Anxb11-RA 32..70 953..915 195 100 Minus
CG9968-PB 1536 Anxb11-RB 599..637 953..915 195 100 Minus
CG5730-PD 975 AnnIX-RD 325..375 678..628 180 94.1 Minus
CG5730-PA 975 AnnIX-RA 325..375 678..628 180 94.1 Minus
CG5730-PB 975 AnnIX-RB 325..375 678..628 180 94.1 Minus
CG5730-PC 975 AnnIX-RC 325..375 678..628 180 94.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 15:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
AnxB11-RG 2927 CG9968-RG 1118..2052 953..19 4600 99.6 Minus
AnxB11-RF 1375 CG9968-RF 111..1045 953..19 4600 99.6 Minus
AnxB11-RE 2485 CG9968-RE 676..1610 953..19 4600 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 15:12:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16418668..16419030 591..953 1725 98.3 Plus
X 23542271 X 16418356..16418589 357..590 1140 99.1 Plus
X 23542271 X 16418081..16418291 151..361 1055 100 Plus
X 23542271 X 16417955..16418026 81..152 360 100 Plus
X 23542271 X 16417833..16417897 19..83 325 100 Plus
3R 32079331 3R 21068339..21068413 702..628 225 86.7 Minus
Blast to na_te.dros performed 2015-02-03 15:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
opus 7521 opus OPUS 7521bp 6376..6439 796..857 126 68.8 Plus

BO10115.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:30:29 Download gff for BO10115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9968-PB 599..1536 15..953 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:41:08 Download gff for BO10115.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9968-PB 599..1536 15..953 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:17:36 Download gff for BO10115.3prime
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RE 676..1614 14..953 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 18:45:25 Download gff for BO10115.3prime
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RE 676..1614 14..953 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 18:45:25 Download gff for BO10115.3prime
Subject Subject Range Query Range Percent Splice Strand
X 16417829..16417895 14..81 97 <- Plus
X 16417956..16418024 82..150 100 <- Plus
X 16418081..16418290 151..360 100 <- Plus
X 16418360..16418589 361..590 99 <- Plus
X 16418668..16419030 591..953 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:17:36 Download gff for BO10115.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16312701..16313063 591..953 99   Plus
arm_X 16311862..16311928 14..81 97 <- Plus
arm_X 16311989..16312057 82..150 100 <- Plus
arm_X 16312114..16312323 151..360 100 <- Plus
arm_X 16312393..16312622 361..590 99 <- Plus

BO10115.5prime Sequence

867 bp (816 high quality bases) assembled on 2006-04-19

> BO10115.5prime
GAAGTTATCAGTCGTCATGTATCCCTTCGGAACTCCCACGGTGGTGCCTG
CCGCAAACTTCGATGCCGTCAAGGATGCTCACGACTTGCGCAAGGCCATG
AAGGGCTTTGGAACAGATGAGGACGCTCTGATTAACATCATCTGTCGGCG
ATCCAACGAGCAGCGCCAGGAGATCCAGCGCCAGTTCAAGACGCACTTCG
GCAAGGACCTCATCGAGGACATCAAGTCGGAGACGAGCGGCAACTTTGAG
AAACTCCTCGTCGGCCTGCTGCGTCCCATCGTGGACTACTACTGCGCCGA
GCTAAACGATGCCATGGCTGGCCTGGGCACCGACGAGGAGGTCCTCATCG
AGATCCTCTGCACGCTGTCCAACATGGAGATCAATACGATCAAAAACCAG
TACTTACGATTGTACGGCGCCCATTTGGAGTCTGAACTAAAGTCGGAGAC
GTCGGGCAACTTTAAGCGGCTGCTCACCTCCTTGTGCACGGCGGCGCGGG
ATGAGAGTGGTCGCGTGGATCCCGTGGCGGCCAAGAACGATGCTAGGGAG
CTACTGAAAGCCGGCGAACTGCGCGTCGGCACCGATGAGAGCATGTTCAA
CATGATCCTCTGCCAGAGGAACTATCAGCAATTGAAACTGATATTCCAAG
AGTACGAGGGCATGACTGGCCACTCGCTGGAGAAGGCGATCAAGAAGGAG
TTCTCCGGCGATGTGATGGAGGGCCTGATTGCCATCTACAGGTGCGTCAC
CAACAAGGCCGAATACTTCGCTTCGCGCCTGCACAAGGCGATGGCCGGAA
TTGGCACCAATGACACCCAGTTGATCCGTGTGATCATCACGCGCAGCGAG
ATTGATATGACGGACAT

BO10115.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:56:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG9968-PA 969 Anxb11-RA 1..851 17..867 4230 99.8 Plus
CG9968-PB 1536 Anxb11-RB 580..1418 29..867 4170 99.8 Plus
CG5730-PD 975 AnnIX-RD 325..375 323..373 180 94.1 Plus
CG5730-PA 975 AnnIX-RA 325..375 323..373 180 94.1 Plus
CG5730-PB 975 AnnIX-RB 325..375 323..373 180 94.1 Plus
CG5730-PC 975 AnnIX-RC 325..375 323..373 180 94.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:37:17
Subject Length Description Subject Range Query Range Score Percent Strand
AnxB11-RF 1375 CG9968-RF 80..930 17..867 4240 99.9 Plus
AnxB11-RC 1429 CG9968-RC 134..984 17..867 4240 99.9 Plus
AnxB11-RA 1233 CG9968-RA 134..984 17..867 4240 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 12:37:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16418668..16419049 410..29 1910 100 Minus
X 23542271 X 16418356..16418589 644..411 1140 99.1 Minus
X 23542271 X 16418081..16418291 850..640 1055 100 Minus
3R 32079331 3R 21068339..21068413 299..373 225 86.7 Plus
Blast to na_te.dros performed 2015-02-02 12:37:14
Subject Length Description Subject Range Query Range Score Percent Strand
opus 7521 opus OPUS 7521bp 6376..6439 205..144 126 68.8 Minus

BO10115.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:30:30 Download gff for BO10115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9968-PA 1..851 17..867 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:41:09 Download gff for BO10115.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9968-PA 1..851 17..867 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:01:22 Download gff for BO10115.5prime
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RA 129..984 12..867 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:42:11 Download gff for BO10115.5prime
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RA 129..984 12..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:42:11 Download gff for BO10115.5prime
Subject Subject Range Query Range Percent Splice Strand
X 16418008..16418024 851..867 100 <- Minus
X 16418081..16418290 641..850 100 <- Minus
X 16418360..16418589 411..640 99 <- Minus
X 16418668..16419049 29..410 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:01:22 Download gff for BO10115.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16312041..16312057 851..867 100 <- Minus
arm_X 16312114..16312323 641..850 100 <- Minus
arm_X 16312393..16312622 411..640 99 <- Minus
arm_X 16312701..16313082 29..410 100 <- Minus

BO10115.complete Sequence

1000 bp assembled on 2008-08-15

GenBank Submission: FJ631649

> BO10115.complete
GAAGTTATCAGTCGTCATGTATCCCTTCGGAACTCCCACGGTGGTGCCTG
CCGCAAACTTCGATGCCGTCAAGGATGCTCACGACTTGCGCAAGGCCATG
AAGGGCTTTGGAACAGATGAGGACGCTCTGATTAACATCATCTGTCGGCG
ATCCAACGAGCAGCGCCAGGAGATCCAGCGCCAGTTCAAGACGCACTTCG
GCAAGGACCTCATCGAGGACATCAAGTCGGAGACGAGCGGCAACTTTGAG
AAACTCCTCGTCGGCCTGCTGCGTCCCATCGTGGACTACTACTGCGCCGA
GCTAAACGATGCCATGGCTGGCCTGGGCACCGACGAGGAGGTCCTCATCG
AGATCCTCTGCACGCTGTCCAACATGGAGATCAATACGATCAAAAACCAG
TACTTACGATTGTACGGCGCCCATTTGGAGTCTGAACTAAAGTCGGAGAC
GTCGGGCAACTTTAAGCGGCTGCTCACCTCCTTGTGCACGGCGGCGCGGG
ATGAGAGTGGTCGCGTGGATCCCGTGGCGGCCAAGAACGATGCTAGGGAG
CTACTGAAAGCCGGCGAACTGCGCGTCGGCACCGATGAGAGCATGTTCAA
CATGATCCTCTGCCAGAGGAACTATCAGCAATTGAAACTGATATTCCAAG
AGTACGAGGGCATGACTGGCCACTCGCTGGAGAAGGCGATCAAGAAGGAG
TTCTCCGGCGATGTGATGGAGGGCCTGATTGCCATCTACAGGTGCGTCAC
CAACAAGGCCGAATACTTCGCTTCGCGCCTGCACAAGGCGATGGCCGGAA
TTGGCACCAATGACACCCAGTTGATCCGTGTGATCATCACGCGCAGCGAG
ATTGATATGACGGACATTAAGGTAGCGTTCGAACGTCTGTACGGCAAGTC
CCTCAAGAGCTGGATCAAGGGCGATACTTCGGGCCACTACAAGCACGCCC
TTTATGCCCTGGTGGGTGAACAGCGCTCCTCTGCAAGCTTTCTAGACCAT

BO10115.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:32:42
Subject Length Description Subject Range Query Range Score Percent Strand
AnxB11-RF 969 CG9968-PF 1..966 17..982 4815 99.9 Plus
AnxB11-RC 969 CG9968-PC 1..966 17..982 4815 99.9 Plus
AnxB11-RA 969 CG9968-PA 1..966 17..982 4815 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:32:42
Subject Length Description Subject Range Query Range Score Percent Strand
AnxB11-RF 1375 CG9968-RF 80..1045 17..982 4815 99.9 Plus
AnxB11-RC 1429 CG9968-RC 134..1099 17..982 4815 99.9 Plus
AnxB11-RA 1233 CG9968-RA 134..1099 17..982 4815 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:32:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16418668..16419049 410..29 1910 100 Minus
X 23542271 X 16418356..16418589 644..411 1140 99.1 Minus
X 23542271 X 16418081..16418291 850..640 1055 100 Minus
X 23542271 X 16417955..16418026 920..849 360 100 Minus
X 23542271 X 16417833..16417897 982..918 325 100 Minus
3R 32079331 3R 21068339..21068413 299..373 225 86.7 Plus
Blast to na_te.dros performed 2014-11-27 20:32:40
Subject Length Description Subject Range Query Range Score Percent Strand
opus 7521 opus OPUS 7521bp 6376..6439 205..144 126 68.8 Minus

BO10115.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:46:20 Download gff for BO10115.complete
Subject Subject Range Query Range Percent Splice Strand
Anxb11-RA 103..1077 12..987 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:08:52 Download gff for BO10115.complete
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RA 134..1099 17..984 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:05:49 Download gff for BO10115.complete
Subject Subject Range Query Range Percent Splice Strand
Anxb11-RA 108..1073 17..984 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:26 Download gff for BO10115.complete
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RA 134..1099 17..984 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:26 Download gff for BO10115.complete
Subject Subject Range Query Range Percent Splice Strand
X 16418081..16418290 641..850 100 <- Minus
X 16418360..16418589 411..640 99 <- Minus
X 16417831..16417895 920..984 96 <- Minus
X 16417956..16418024 851..919 100 <- Minus
X 16418668..16419049 29..410 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:08:52 Download gff for BO10115.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16311864..16311928 920..984 96 <- Minus
arm_X 16311989..16312057 851..919 100 <- Minus
arm_X 16312114..16312323 641..850 100 <- Minus
arm_X 16312393..16312622 411..640 99 <- Minus
arm_X 16312701..16313082 29..410 100 <- Minus

BO10115.pep Sequence

Translation from 16 to 1000

> BO10115.pep
MYPFGTPTVVPAANFDAVKDAHDLRKAMKGFGTDEDALINIICRRSNEQR
QEIQRQFKTHFGKDLIEDIKSETSGNFEKLLVGLLRPIVDYYCAELNDAM
AGLGTDEEVLIEILCTLSNMEINTIKNQYLRLYGAHLESELKSETSGNFK
RLLTSLCTAARDESGRVDPVAAKNDARELLKAGELRVGTDESMFNMILCQ
RNYQQLKLIFQEYEGMTGHSLEKAIKKEFSGDVMEGLIAIYRCVTNKAEY
FASRLHKAMAGIGTNDTQLIRVIITRSEIDMTDIKVAFERLYGKSLKSWI
KGDTSGHYKHALYALVGEQRSSASFLDH

BO10115.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:20:31
Subject Length Description Subject Range Query Range Score Percent Strand
AnxB11-PF 322 CG9968-PF 1..322 1..322 1649 100 Plus
AnxB11-PC 322 CG9968-PC 1..322 1..322 1649 100 Plus
AnxB11-PA 322 CG9968-PA 1..322 1..322 1649 100 Plus
AnxB11-PG 511 CG9968-PG 194..511 5..322 1624 100 Plus
AnxB11-PE 511 CG9968-PE 194..511 5..322 1624 100 Plus
AnxB11-PG 511 CG9968-PG 190..357 159..327 219 33.7 Plus
AnxB11-PF 322 CG9968-PF 17..168 172..327 216 34 Plus
AnxB11-PC 322 CG9968-PC 17..168 172..327 216 34 Plus
AnxB11-PA 322 CG9968-PA 17..168 172..327 216 34 Plus