Clone Sequence Records
BO10151.5prime Sequence
897 bp (754 high quality bases) assembled on 2006-04-19
> BO10151.5prime
GAAGTTATCAGTCGACATGACGAGCGGTACGGTAGCAACGGCGGTGGAGG
TGCAGCTGCCGCTCAAGGTCGTTCGCCGTAAAATCGAGCGCGTTGGCTTC
GCTTACTTTGCGCAACGGCGCCAATTTCTAGCTCCCGGCGGCGTGGAGCG
CAGCGAAAGCGATGAGAAATTGGAGGGCGTGGGCGAGGAGGTGGACATCA
GCTACCTAAAGTCGCTGGATCCTAAGGAGTGGAAGGACCAGGATCATTAC
GCCGTTCTTGGCTTGGGCAAGCTCCGATACGAGGCCAGCGAGGATGATGT
TCGACGGGCTTACAGGCGCATGGTTCTGCTGCACCATCCCGATAAGCGGA
AAGCCAAGGGCGAGGAAGTCATCCAGGACGATGATTACTTCACATGCATA
ACCAAAGCTTACGAGATACTGGGCACATCCAAGCCGCGCCGCAGCTTTGA
CTCAGTGGATCCCGAGTTTGACGACTCGCTGCCCTCACAGAACGACATCG
ATAACGACTACTTTGGCGTATTTAACAAATTTTTCACACTTAACGGGCGC
TGGAGCGAAAAGCCGCATGTTCCCTCCTTCGGGCAGGTGGACGCCAAACG
CGAAGAGGTGGAGCGCTTCTACAACTTCTGGTACGATTTTAAGTCATGGC
GGGAATTCAGCTACTTGGACGAAGAGGACAAGGAGAAGGGCCAGGACCGC
GACGAACGTCGCTGGATCGAANAGGAGAACAGGGCGGCTCGAATCAAGCG
CAAGAAGGAGGAAATGTCTCGTATCCGGTCGCTCGTCGATTTAGCCTACA
ACAATGATAAGCGCATTCAGCGCTTCAAGCANGAGGAAAAGGATCGCANG
GCTGCTGCCNAGCGAGCCCAGATGGACGCCGCCCAGGCCCAGAAGGC
BO10151.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:57:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10565-PA | 1941 | CG10565-RA | 1..881 | 17..897 | 4304 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:53:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10565-RB | 2538 | CG10565-RB | 477..1357 | 17..897 | 4346 | 99.4 | Plus |
| CG10565-RA | 2237 | CG10565-RA | 176..1056 | 17..897 | 4346 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21134431..21134906 | 897..422 | 2321 | 98.9 | Minus |
| 3L | 28110227 | 3L | 21135618..21135877 | 276..17 | 1300 | 100 | Minus |
| 3L | 28110227 | 3L | 21135363..21135510 | 423..276 | 740 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 08:53:35 has no hits.
BO10151.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:31:24 Download gff for
BO10151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-PA | 1..881 | 17..897 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:42:19 Download gff for
BO10151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-PA | 1..881 | 17..897 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:41:35 Download gff for
BO10151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-RA | 171..1056 | 9..897 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:29:36 Download gff for
BO10151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-RA | 171..1056 | 9..897 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:29:36 Download gff for
BO10151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21134431..21134905 | 423..897 | 98 | <- | Minus |
| 3L | 21135364..21135509 | 277..422 | 100 | <- | Minus |
| 3L | 21135618..21135882 | 9..276 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:41:35 Download gff for
BO10151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21127531..21128005 | 423..897 | 98 | <- | Minus |
| arm_3L | 21128464..21128609 | 277..422 | 100 | <- | Minus |
| arm_3L | 21128718..21128982 | 9..276 | 98 | | Minus |
BO10151.3prime Sequence
978 bp (901 high quality bases) assembled on 2006-04-19
> BO10151.3prime
ATGGTCTAGAAAGCTTGCTTTGACCGCCGCCTGTGCCTCCTTCTTGGAGT
TAACCAGCTCGACCAGCTCTTTGACGCGACGTAAGCAGTCCTTTTTACTG
CGATTCGGTATGCAGGCGGCGATGCAATCCCAGCGATCGGGTGTCGTCGT
TGGATAGGTTTTAATGGCCTGTTCGAGCAGGGCTTGCTCCTCCTTGGTCC
AGGTTTTGGAGGCAGCACCGCCGCCCGTAGACCCATTTGTGGCCGGAACT
GGGGCTGGTGCAGCCGTGGGGTTTGCTGGAGCTGGAGCCGTGCCATTCTG
CTTGGTTGACTGATTGTTCGCCTTATGATCTACACCGTTTTGTTTCAAGT
TCTCCTTGCTCGCCTGGGCCGTCTCCTCGCCCAGGGTTATATCCTTACAC
GTCTGAACATCTTTCTTGGACTTCTCGAAACTGGCAAATGCCGCATCGTT
GGCTTGAGTCTTCAGGGAGCTCTTCGAGTGATCTGTGTTCTGGAGCGCCT
TGGCTTTGTTGAGCACATCCCTGGCATTGACCAGAACAGTGTTATCCGGG
CTATGCTGGTTAATGAAAGTGGCTATGACATCCCAACGCTGTGCAGTGCC
AGCGGGAAACAGATTAACCGCCTTGATAAGCAACTGCACGTTCTCATTGC
TCCAGAGCTCATTCTTCTTGACCTCCTTAACGCCTTTTGGCGTGGCCGCT
GAGCTGGCAAGCTTCTTGGCCTGTGTCTGGTTAATCTCCTCCAACTCGGC
AGCTATCTTCTGCTCGGCCGTTTGAAGGGCAGCAACAAACGACTCACGGC
CCTTGCTTTCCATTGCCTTATTTAGAGCTTGCAGCTCTGCCAGATTGAAG
GTCTCGCAAATCTTCTCGGTGCCCTCCATGTGCTTCAGCTGATCCTTGTC
GTTCTGGGCATAATACTTGCAGTCCTTGACCTTGTCGCGCAGCGTTTTGC
GCTCCTTCTTAAGCAGCTTTTTCTGCTG
BO10151.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:57:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10565-PA | 1941 | CG10565-RA | 979..1938 | 978..19 | 4775 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:09:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10565-RB | 2538 | CG10565-RB | 1455..2414 | 978..19 | 4785 | 99.9 | Minus |
| CG10565-RA | 2237 | CG10565-RA | 1154..2113 | 978..19 | 4785 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:08:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21133374..21134333 | 19..978 | 4785 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-01-30 17:09:03 has no hits.
BO10151.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:31:23 Download gff for
BO10151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-PA | 979..1941 | 16..978 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:42:18 Download gff for
BO10151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-PA | 979..1941 | 16..978 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:33:18 Download gff for
BO10151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-RA | 1154..2113 | 19..978 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:57:37 Download gff for
BO10151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-RA | 1154..2113 | 19..978 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:57:37 Download gff for
BO10151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21133374..21134333 | 19..978 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:33:18 Download gff for
BO10151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21126474..21127433 | 19..978 | 99 | | Plus |
BO10151.complete Sequence
1972 bp (1972 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631661
> BO10151.complete
GAAGTTATCAGTCGACATGACGAGCGGTACGGTAGCAACGGCGGTGGAGG
TGCAGCTGCCGCTCAAGGTCGTTCGCCGTAAAATCGAGCGCGTTGGCTTC
GCTTACTTTGCGCAACGGCGCCAATTTCTAGCTCCCGGCGGCGTGGAGCG
CAGCGAAAGCGATGAGAAATTGGAGGGCGTGGGCGAGGAGGTGGACATCA
GCTACCTAAAGTCGCTGGATCCTAAGGAGTGGAAGGACCAGGATCATTAC
GCCGTTCTTGGCTTGGGCAAGCTCCGATACGAGGCCAGCGAGGATGATGT
TCGACGGGCTTACAGGCGCATGGTTCTGCTGCACCATCCCGATAAGCGGA
AAGCCAAGGGCGAGGAAGTCATCCAGGACGATGATTACTTCACATGCATA
ACCAAAGCTTACGAGATACTGGGCACATCCAAGCCGCGCCGCAGCTTTGA
CTCAGTGGATCCCGAGTTTGACGACTCGCTGCCCTCACAGAACGACATCG
ATAACGACTACTTTGGCGTATTTAACAAATTTTTCACACTTAACGGGCGC
TGGAGCGAAAAGCCGCATGTTCCCTCCTTCGGGCAGGTGGACGCCAAACG
CGAAGAGGTGGAGCGCTTCTACAACTTCTGGTACGATTTTAAGTCATGGC
GGGAATTCAGCTACTTGGACGAAGAGGACAAGGAGAAGGGCCAGGACCGC
GACGAACGTCGCTGGATCGAAAAGGAGAACAGGGCGGCTCGAATCAAGCG
CAAGAAGGAGGAAATGTCTCGTATCCGGTCGCTCGTCGATTTAGCCTACA
ACAATGATAAGCGCATTCAGCGCTTCAAGCAGGAGGAAAAGGATCGCAAG
GCTGCTGCCAAGCGAGCCAAGATGGACGCCGCCCAGGCCCAGAAGGCAGA
AGCTGATCGTGCCATCCGTGAAGCGGCTTTGGCCAAGGAGAAGGCTGAAA
AGGCCGAGCAGAAACGCATCGAGCAGATCCGCATCGAACGCGAGCAGCAG
AAAAAGCTGCTTAAGAAGGAGCGCAAAACGCTGCGCGACAAGGTCAAGGA
CTGCAAGTATTATGCCAAGAACGACAAGGATCAGCTGAAGCACATGGAGG
GCACCGAGAAGATTTGCGAGACCTTCAATCTGGCAGAGCTGCAAGCTCTA
AATAAGGCAATGGAAAGCAAGGGCCGTGAGTCGTTTGTTGCTGCCCTTCA
AACGGCCGAGCAGAAGATAGCTGCCGAGTTGGAGGAGATTAACCAGACAC
AGGCCAAGAAGCTTGCCAGCTCAGCGGCCACGCCAAAAGGCGTTAAGGAG
GTCAAGAAGAATGAGCTCTGGAGCAATGAGAACGTGCAGTTGCTTATCAA
GGCGGTTAATCTGTTTCCCGCTGGCACTGCACAGCGTTGGGATGTCATAG
CCACTTTCATTAACCAGCATAGCCCGGATAACACTGTTCTGGTCAATGCC
AGGGATGTGCTCAACAAAGCCAAGGCGCTCCAGAACACAGATCACTCGAA
GAGCTCCCTGAAGACTCAAGCCAACGATGCGGCATTTGCCAGTTTCGAGA
AGTCCAAGAAAGATGTTCAGACGTGTAAGGATATAACCCTGGGCGAGGAG
ACGGCCCAGGCGAGCAAGGAGAACTTGAAACAAAACGGTGTAGATCATAA
GGCGAACAATCAGTCAACCAAGCAGAATGGCACGGCTCCAGCTCCAGCAA
ACCCCACGGCTGCACCAGCCCCAGTTCCGGCCACAAATGGGTCTACGGGC
GGCGGTGCTGCCTCCAAAACCTGGACCAAGGAGGAGCAAGCCCTGCTCGA
ACAGGCCATTAAAACCTATCCAACGACGACACCCGATCGCTGGGATTGCA
TCGCCGCCTGCATACCGAATCGCAGTAAAAAGGACTGCTTACGTCGCGTC
AAAGAGCTGGTCGAGCTGGTTAACTCCAAGAAGGAGGCACAGGCGGCGGT
CAAAGCAAGCTTTCTAGACCAT
BO10151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:55:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10565-RB | 1941 | CG10565-PB | 1..1938 | 17..1954 | 9690 | 100 | Plus |
| CG10565-RA | 1941 | CG10565-PA | 1..1938 | 17..1954 | 9690 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:55:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10565-RB | 2538 | CG10565-RB | 477..2414 | 17..1954 | 9690 | 100 | Plus |
| CG10565-RA | 2237 | CG10565-RA | 176..2113 | 17..1954 | 9690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:55:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21133374..21134906 | 1954..422 | 7665 | 100 | Minus |
| 3L | 28110227 | 3L | 21135618..21135877 | 276..17 | 1300 | 100 | Minus |
| 3L | 28110227 | 3L | 21135363..21135510 | 423..276 | 740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:55:29 has no hits.
BO10151.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:58:36 Download gff for
BO10151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-RA | 1..1941 | 17..1957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:16:18 Download gff for
BO10151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-RA | 160..2102 | 9..1954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:02:28 Download gff for
BO10151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-RA | 176..2113 | 17..1956 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:58:37 Download gff for
BO10151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-RA | 160..2102 | 9..1954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:08 Download gff for
BO10151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10565-RA | 176..2113 | 17..1956 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:08 Download gff for
BO10151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21133371..21134905 | 423..1956 | 99 | <- | Minus |
| 3L | 21135364..21135509 | 277..422 | 100 | <- | Minus |
| 3L | 21135618..21135877 | 17..276 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:02:28 Download gff for
BO10151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21126471..21128005 | 423..1956 | 99 | <- | Minus |
| arm_3L | 21128464..21128609 | 277..422 | 100 | <- | Minus |
| arm_3L | 21128718..21128977 | 17..276 | 100 | | Minus |
BO10151.pep Sequence
Translation from 16 to 1972
> BO10151.pep
MTSGTVATAVEVQLPLKVVRRKIERVGFAYFAQRRQFLAPGGVERSESDE
KLEGVGEEVDISYLKSLDPKEWKDQDHYAVLGLGKLRYEASEDDVRRAYR
RMVLLHHPDKRKAKGEEVIQDDDYFTCITKAYEILGTSKPRRSFDSVDPE
FDDSLPSQNDIDNDYFGVFNKFFTLNGRWSEKPHVPSFGQVDAKREEVER
FYNFWYDFKSWREFSYLDEEDKEKGQDRDERRWIEKENRAARIKRKKEEM
SRIRSLVDLAYNNDKRIQRFKQEEKDRKAAAKRAKMDAAQAQKAEADRAI
REAALAKEKAEKAEQKRIEQIRIEREQQKKLLKKERKTLRDKVKDCKYYA
KNDKDQLKHMEGTEKICETFNLAELQALNKAMESKGRESFVAALQTAEQK
IAAELEEINQTQAKKLASSAATPKGVKEVKKNELWSNENVQLLIKAVNLF
PAGTAQRWDVIATFINQHSPDNTVLVNARDVLNKAKALQNTDHSKSSLKT
QANDAAFASFEKSKKDVQTCKDITLGEETAQASKENLKQNGVDHKANNQS
TKQNGTAPAPANPTAAPAPVPATNGSTGGGAASKTWTKEEQALLEQAIKT
YPTTTPDRWDCIAACIPNRSKKDCLRRVKELVELVNSKKEAQAAVKASFL
DH
BO10151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10565-PB | 646 | CG10565-PB | 1..646 | 1..646 | 3321 | 100 | Plus |
| CG10565-PA | 646 | CG10565-PA | 1..646 | 1..646 | 3321 | 100 | Plus |
