Clone BO10168 Report

Search the DGRC for BO10168

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:101
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG6854-RA
Protein status:BO10168.pep: Imported from assembly
Sequenced Size:1321

Clone Sequence Records

BO10168.3prime Sequence

945 bp (786 high quality bases) assembled on 2006-04-19

> BO10168.3prime
ATGGTCTAGATAGCTTGCCTTGGACTCCTCAAGATCTTCTTTGTAGAGTT
CCTTGAAGATGAGCTTTTGTATCTTGGTGCGTATGCGCAGCTTCTGGGCT
GCGGTCAGCTGCTTCATGTACGGATGTAGGCTGAGCAAGTAGTGGTAGTC
ATCGTCCTCTGGTACGAGCGGAGTGTCCATTGTCGAGGAACCATTAAAAT
TGCTATCCTCGGAGAGACGCGGGCGCTTCAGCTTAAGGGCGGGTATCAGT
CCATTGGCGTAGGAGTGTTGAGTGAAGCTCAGGTGATCTCCGTTTCCTCC
TACAGCAGAGGTGGGTCCGAAATCCTCATTTCGGTCTTTGGCCGCAAGAT
GTGCTGCTGCCAGAGTGGCCAGCGGATGGTGTGCTTTGTTGTATAGAGGC
GGTGGCGACACAGATCTCTTGCCGCCCATTGGCGCTCCATTCGAGGATAC
AGATGACGCGGATGTGGTCGTTGCCGGCGCCAGAACAGCTGCTGAGCCCG
GTTGTTGTACTTGTGCGGATGTGGTGGTCACCATTGGCGGTGGAGAACAG
TGTGCGGCTGGTGGTTCCACTAGCACTTGTAGTGAGGGTGCCACTGGAGA
TGTCATTTGCTGTGGCGGAGGTGGCTTTCTGCTCAAGTCCTCCGCCTCCT
TTTCCAGCTCCATCAACTGAGCGCGGAGTAATCCTGCCTTAATTAAAGCG
TGCTGATGTGCCTCTTCTTGGGCTCGCAAAGCTCCGGTGGCCAGTGGTGT
GGTGCTAACTTGATTCATTTGATGCGCAGCCGGTGGCGTGGGCATCGTTT
CCTCCATGGTGGCTTCGCTAGCCTCTCCGTCCGCCTCATTTCCTCCTCGT
CGTAATCCTCGTCGCTGTCCTGCAGACGACGTATTAGACCGTTTGGTAAA
TCCGGCTCCACCACTGTCTTTTCACAGTCCTCGCTTTGCTGGCTG

BO10168.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:57:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG6854-PA 1290 CG6854-RA 469..1287 837..19 4095 100 Minus
CG6854-PA 1290 CG6854-RA 360..468 945..837 520 99 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 03:35:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-RB 1717 CG45071-RB 586..1513 945..19 4600 99.8 Minus
CG45071-RA 1867 CG45071-RA 736..1663 945..19 4600 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 03:35:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15109599..15110526 945..19 4575 99.8 Minus
Blast to na_te.dros performed on 2015-02-09 03:35:25 has no hits.

BO10168.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:31:53 Download gff for BO10168.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6854-PA 360..1290 18..945 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:42:59 Download gff for BO10168.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6854-PA 360..1290 18..945 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 06:16:14 Download gff for BO10168.3prime
Subject Subject Range Query Range Percent Splice Strand
CTPsyn-RA 736..1663 19..945 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:24:31 Download gff for BO10168.3prime
Subject Subject Range Query Range Percent Splice Strand
CG45071-RA 736..1663 19..945 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:24:31 Download gff for BO10168.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 15109599..15110526 19..945 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 06:16:14 Download gff for BO10168.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15102699..15103626 19..945 99   Minus

BO10168.5prime Sequence

878 bp (814 high quality bases) assembled on 2006-04-19

> BO10168.5prime
GAAGTTATCAGTCGACATGGCGCCAAAAAAGTCCACCATTGTGCTCAATG
TGGAGCAGTTTATTCACGACATCGAGGAGCGCCCGGCCATCTGGAACCGC
AATTTCCACTGCAACAAGGCCTTCCTCGAGCAGATGTGGGACGAGCTGAG
CGGAGCGCACAAACTGCCAAAGATCGTTCTCAAGGCCAAATGGAAGGGAC
TTCGAGACAATTTCCGTGTGGAGTACAAAAGGATACCGCGGGCGGATAAC
GGTGATTTTATGGTGGATCCGGCCACCTTTGAGTCCAAGTGGCTGCACTA
CTATGCATTGTTGTTTTTAACTGATCACATGCGTCATCGTTTGCCAAAGA
ACGAACAGGATCAGTCATTTTACTTCAGCCAGCAAAGCGAGGACTGTGAA
AAGACAGTGGTGGAGCCGGATTTAACAAACGGTCTAATACGTCGTCTGCA
GGACAGCGACGAGGATTACGACGAGGAGGAAATGGAGGCGGACGGAGAGG
CTAGCGAAGCCACCATGGAGGAAACGATGCCCACGCCACCGGCTGCGCAT
CAAATGAATCAAGTTAGCACCACACCACTGGCCACCGGAGCTTTGCGAGC
CCAAGAAGAGGCACATCAGCACGCTTTAATTAAGGCAGGATTACTCCGCG
CTCAGTTGATGGAGCTGGAAAAGGAGGCGGAGGACTTGAGCAGAAAGCCA
CCTCCGCCACAGCAAATGACATCTCCAGTGGCACCCTCACTACAAGTGCT
AGTGGAACCACCAGCCGCACACTGTTCTCCACCGCCAATGGTGACCACCA
CATCCGCACAAGTACAACAAACCGGGCTCAGCAGCTGTTCTGGCGCCGGC
AACGACCACATCCGCGTCATCTGTATCC

BO10168.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG6854-PA 1290 CG6854-RA 1..804 17..820 4020 100 Plus
CG6854-PB 1872 CG6854-RB 1..154 17..170 770 100 Plus
CG6854-PA 1290 CG6854-RA 803..861 820..878 295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:03:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-RA 1867 CG45071-RA 377..1237 17..878 4285 99.9 Plus
CG45071-RB 1717 CG45071-RB 529..1087 319..878 2775 99.8 Plus
CG45071-RB 1717 CG45071-RB 377..530 17..170 770 100 Plus
CTPsyn-RB 2423 CG45070-RB 246..399 17..170 770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:03:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15109537..15110100 314..878 2760 99.6 Plus
3L 28110227 3L 15108805..15108958 17..170 770 100 Plus
3L 28110227 3L 15109334..15109491 167..324 760 98.7 Plus
Blast to na_te.dros performed on 2015-02-12 20:03:57 has no hits.

BO10168.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:31:54 Download gff for BO10168.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6854-PA 1..861 17..878 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:43:01 Download gff for BO10168.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6854-PA 1..861 17..878 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:34:04 Download gff for BO10168.5prime
Subject Subject Range Query Range Percent Splice Strand
CTPsyn-RA 377..1237 17..878 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:36:16 Download gff for BO10168.5prime
Subject Subject Range Query Range Percent Splice Strand
CG45071-RA 377..1237 17..878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:36:16 Download gff for BO10168.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15108805..15108958 17..170 100 -> Plus
3L 15109338..15109487 171..320 100 -> Plus
3L 15109544..15110100 321..878 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:34:04 Download gff for BO10168.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15101905..15102058 17..170 100 -> Plus
arm_3L 15102438..15102587 171..320 100 -> Plus
arm_3L 15102644..15103200 321..878 99   Plus

BO10168.complete Sequence

1321 bp assembled on 2008-08-15

> BO10168.complete
GAAGTTATCAGTCGACATGGCGCCAAAAAAGTCCACCATTGTGCTCAATG
TGGAGCAGTTTATTCACGACATCGAGGAGCGCCCGGCCATCTGGAACCGC
AATTTCCACTGCAACAAGGCCTTCCTCGAGCAGATGTGGGACGAGCTGAG
CGGAGCGCACAAACTGCCAAAGATCGTTCTCAAGGCCAAATGGAAGGGAC
TTCGAGACAATTTCCGTGTGGAGTACAAAAGGATACCGCGGGCGGATAAC
GGTGATTTTATGGTGGATCCGGCCACCTTTGAGTCCAAGTGGCTGCACTA
CTATGCATTGTTGTTTTTAACTGATCACATGCGTCATCGTTTGCCAAAGA
ACGAACAGGATCAGTCATTTTACTTCAGCCAGCAAAGCGAGGACTGTGAA
AAGACAGTGGTGGAGCCGGATTTAACAAACGGTCTAATACGTCGTCTGCA
GGACAGCGACGAGGATTACGACGAGGAGGAAATGGAGGCGGACGGAGAGG
CTAGCGAAGCCACCATGGAGGAAACGATGCCCACGCCACCGGCTGCGCAT
CAAATGAATCAAGTTAGCACCACACCACTGGCCACCGGAGCTTTGCGAGC
CCAAGAAGAGGCACATCAGCACGCTTTAATTAAGGCAGGATTACTCCGCG
CTCAGTTGATGGAGCTGGAAAAGGAGGCGGAGGACTTGAGCAGAAAGCCA
CCTCCGCCACAGCAAATGACATCTCCAGTGGCACCCTCACTACAAGTGCT
AGTGGAACCACCAGCCGCACACTGTTCTCCACCGCCAATGGTGACCACCA
CATCCGCACAAGTACAACAACCGGGCTCAGCAGCTGTTCTGGCGCCGGCA
ACGACCACATCCGCGTCATCTGTATCCTCGAATGGAGCGCCAATGGGCGG
CAAGAGATCTGTGTCGCCACCGCCTCTATACAACAAAGCACACCATCCGC
TGGCCACTCTGGCAGCAGCACATCTTGCGGCCAAAGACCGAAATGAGGAT
TTCGGACCCACCTCTGCTGTAGGAGGAAACGGAGATCACCTGAGCTTCAC
TCAACACTCCTACGCCAATGGACTGATACCCGCCCTTAAGCTGAAGCGCC
CGCGTCTCTCCGAGGATAGCAATTTTAATGGTTCCTCGACAATGGACACT
CCGCTCGTACCAGAGGACGATGACTACCACTACTTGCTCAGCCTACATCC
GTACATGAAGCAGCTGACCGCAGCCCAGAAGCTGCGCATACGCACCAAGA
TACAAAAGCTCATCTTCAAGGAACTCTACAAAGAAGATCTTGAGGAGTCC
AAGGCAAGCTATCTAGACCAT

BO10168.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:24:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-RA 1290 CG45071-PA 1..1287 17..1303 6435 100 Plus
CG45071-RB 1140 CG45071-PB 153..1137 319..1303 4925 100 Plus
CG45071-RB 1140 CG45071-PB 1..154 17..170 770 100 Plus
CTPsyn-RB 1872 CG45070-PB 1..154 17..170 770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:24:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-RA 1867 CG45071-RA 377..1663 17..1303 6435 100 Plus
CG45071-RB 1717 CG45071-RB 529..1513 319..1303 4925 100 Plus
CG45071-RB 1717 CG45071-RB 377..530 17..170 770 100 Plus
CTPsyn-RB 2423 CG45070-RB 246..399 17..170 770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:24:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15109537..15110526 314..1303 4935 99.9 Plus
3L 28110227 3L 15108805..15108958 17..170 770 100 Plus
3L 28110227 3L 15109334..15109491 167..324 760 98.7 Plus
Blast to na_te.dros performed on 2014-11-27 14:24:06 has no hits.

BO10168.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:45:15 Download gff for BO10168.complete
Subject Subject Range Query Range Percent Splice Strand
CG6854-RA 375..1661 17..1303 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:01 Download gff for BO10168.complete
Subject Subject Range Query Range Percent Splice Strand
CTPsyn-RA 377..1663 17..1305 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:00:28 Download gff for BO10168.complete
Subject Subject Range Query Range Percent Splice Strand
CG6854-RA 375..1661 17..1305 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:10:39 Download gff for BO10168.complete
Subject Subject Range Query Range Percent Splice Strand
CG45071-RA 377..1663 17..1305 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:10:39 Download gff for BO10168.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15108805..15108958 17..170 100 -> Plus
3L 15109338..15109487 171..320 100 -> Plus
3L 15109544..15110526 321..1305 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:01 Download gff for BO10168.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15102438..15102587 171..320 100 -> Plus
arm_3L 15101905..15102058 17..170 100 -> Plus
arm_3L 15102644..15103626 321..1305 99   Plus

BO10168.pep Sequence

Translation from 16 to 1321

> BO10168.pep
MAPKKSTIVLNVEQFIHDIEERPAIWNRNFHCNKAFLEQMWDELSGAHKL
PKIVLKAKWKGLRDNFRVEYKRIPRADNGDFMVDPATFESKWLHYYALLF
LTDHMRHRLPKNEQDQSFYFSQQSEDCEKTVVEPDLTNGLIRRLQDSDED
YDEEEMEADGEASEATMEETMPTPPAAHQMNQVSTTPLATGALRAQEEAH
QHALIKAGLLRAQLMELEKEAEDLSRKPPPPQQMTSPVAPSLQVLVEPPA
AHCSPPPMVTTTSAQVQQPGSAAVLAPATTTSASSVSSNGAPMGGKRSVS
PPPLYNKAHHPLATLAAAHLAAKDRNEDFGPTSAVGGNGDHLSFTQHSYA
NGLIPALKLKRPRLSEDSNFNGSSTMDTPLVPEDDDYHYLLSLHPYMKQL
TAAQKLRIRTKIQKLIFKELYKEDLEESKASYLDH

BO10168.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-PA 429 CG45071-PA 1..429 1..429 2248 100 Plus
CG45071-PB 379 CG45071-PB 1..379 1..429 1822 85.1 Plus
CTPsyn-PB 623 CG45070-PB 1..54 1..54 281 96.3 Plus