Clone BO10174 Report

Search the DGRC for BO10174

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:101
Well:74
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO10174.pep: Imported from assembly
Sequenced Size:985

Clone Sequence Records

BO10174.3prime Sequence

906 bp (848 high quality bases) assembled on 2006-04-19

> BO10174.3prime
ATGGTCTAGAAAGCTTGCAGGCTGAACGAGGACTGCGCGATGCCGAAGAG
CGCCAGCATGGTGGCAGAGCGGGTCACCACACGGTTGGGCGACGACGAGC
TGGTGGTGAAGCCATGGCTGCAGTGCGTCGTGGCCTGTGTGGACAACGTC
GGCGCCTTGCGGCTGGGTGGTTGCTTTCTTGGGCGGACTGCTGAAGGGAG
ACCCCTTAGATTTGATGCTAGGAGACATCCTCACACTTGCCTTCACACAA
GCGGGTAGTAATGGTATTTCAGCTTTGCCTTGCCAGCTTTGGGACGTAGC
TCCCTTCAGATGAGCCACATGTTCCTTGGCTTTGGTGTCCTCAGTTTGTA
CTGCTTTTGCCTTGGGCGGACTTATTAATCTGTCGGGTAAGACGACAGTT
GAAGGTACTCCCAGCTCTGATTTCAATGCTTGTGGGGGTTCCTTGCATAC
GGTACTGTTCTCCTCCAGAAAGCTTAAGTCGGGAAGCTCCAGTTGTGGGC
AGGGTTTTTCCTCTGAAGGCGAGTGCAGATTTGGCATGGAACTGGAACTC
ACATTTGTCTTAAGGGGGGTTTCTGTGGCAGAAGTCAATTGCTGCAGCAG
TTCCAATATAAATTCGTCATCATTTGGAGGAGGTTTGGACGTTAAGGCCG
CAGGGTGAGAAGGTAGCGTAGCAGCAGGAGATTCAAAAAGTTCAGATTGT
GGAGCAGTGATGGGAAGTGCTGCCTCCGAGTTCAGATCTTCATCAGAGGA
GACCTCATCGTTGTGTGGCCACAAACAGCTCCTGGACTCGCACTTCAGCA
GCTGCTCCTCGAGATTAATGTAAAAGTAGCGCAGCTTGTGATTCCTGCCT
TCACTCTGGCACTCCAGACACTCGTCTCCCGGCTGCAGTCGCTGCATTCT
CAACGA

BO10174.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:57:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG8229-PC 954 CG8229-RC 64..951 906..19 4415 99.8 Minus
CG8229-PA 1080 CG8229-RA 64..815 906..155 3760 100 Minus
CG33199-PA 240 CG33199-RA 50..188 157..19 670 99.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 15:12:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG8229-RE 1951 CG8229-RE 372..1259 906..19 4425 99.9 Minus
CG8229-RD 1459 CG8229-RD 372..1123 906..155 3760 100 Minus
CG33199-RB 1523 CG33199-RB 261..399 157..19 680 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 15:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8949845..8950596 155..906 3760 100 Plus
2R 25286936 2R 8948805..8948943 19..157 680 99.3 Plus
Blast to na_te.dros performed on 2015-02-03 15:12:14 has no hits.

BO10174.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:32:04 Download gff for BO10174.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8229-PC 65..954 15..905 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:43:13 Download gff for BO10174.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8229-PC 65..954 15..905 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:17:31 Download gff for BO10174.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8229-RE 373..1268 8..905 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 18:45:21 Download gff for BO10174.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8229-RE 373..1268 8..905 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 18:45:21 Download gff for BO10174.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8948796..8948941 8..155 95 <- Plus
2R 8949846..8950595 156..905 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:17:31 Download gff for BO10174.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4836301..4836446 8..155 95 <- Plus
arm_2R 4837351..4838100 156..905 100   Plus

BO10174.5prime Sequence

778 bp (777 high quality bases) assembled on 2006-04-19

> BO10174.5prime
GAAGTTATCAGTCGACATGCGCATTCTGGGGGAAACCTCTGAGTTTTTCG
GCCGGGCAAACCAAGGACCACCACAATCGTCGTTGAGAATGCAGCGACTG
CAGCCGGGAGACGAGTGTCTGGAGTGCCAGAGTGAAGGCAGGAATCACAA
GCTGCGCTACTTTTACATTAATCTCGAGGAGCAGCTGCTGAAGTGCGAGT
CCAGGAGCTGTTTGTGGCCACACAACGATGAGGTCTCCTCTGATGAAGAT
CTGAACTCGGAGGCAGCACTTCCCATCACTGCTCCACAATCTGAACTTTT
TGAATCTCCTGCTGCTACGCTACCTTCTCACCCTGCGGCCTTAACGTCCA
AACCTCCTCCAAATGATGACGAATTTATATTGGAACTGCTGCAGCAATTG
ACTTCTGCCACAGAAACCCCCCTTAAGACAAATGTGAGTTCCAGTTCCAT
GCCAAATCTGCACTCGCCTTCAGAGGAAAAACCCTGCCCACAACTGGAGC
TTCCCGACTTAAGCTTTCTGGAGGAGAACAGTACCGTATGCAAGGAACCC
CCACAAGCATTGAAATCAGAGCTGGGAGTACCTTCAACTGTCGTCTTACC
CGACAGATTAATAAGTCCGCCCAAGGCAAAAGCAGTACAAACTGAGGACA
CCAAAGCCAAGGAACATGTGGCTCATCTGAAGGGAGCTACGTCCCAAAGC
TGGCAAGGCAAAGCTGAAATACCATTACTACCCGCTTGTGTGAAGGCAAG
TGTGAGGATGTCTCCTAGCATCAAATCT

BO10174.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:57:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8229-PA 1080 CG8229-RA 1..762 17..778 3810 100 Plus
CG8229-PC 954 CG8229-RC 1..762 17..778 3810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8229-RE 1951 CG8229-RE 308..1070 16..778 3815 100 Plus
CG8229-RD 1459 CG8229-RD 308..1070 16..778 3815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:29:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8949898..8950660 778..16 3815 100 Minus
Blast to na_te.dros performed on 2015-02-11 10:29:55 has no hits.

BO10174.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:32:05 Download gff for BO10174.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8229-PC 1..762 17..778 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:43:15 Download gff for BO10174.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8229-PC 1..762 17..778 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:48:43 Download gff for BO10174.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8229-RD 305..1070 9..778 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:25:57 Download gff for BO10174.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8229-RD 305..1070 9..778 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:25:57 Download gff for BO10174.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8949898..8950663 9..778 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:48:43 Download gff for BO10174.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4837403..4838168 9..778 99   Minus

BO10174.complete Sequence

985 bp assembled on 2008-08-15

GenBank Submission: FJ631667

> BO10174.complete
GAAGTTATCAGTCGACATGCGCATTCTGGGGGAAACCTCTGAGTTTTTCG
GCCGGGCAAACCAAGGACCACCACAATCGTCGTTGAGAATGCAGCGACTG
CAGCCGGGAGACGAGTGTCTGGAGTGCCAGAGTGAAGGCAGGAATCACAA
GCTGCGCTACTTTTACATTAATCTCGAGGAGCAGCTGCTGAAGTGCGAGT
CCAGGAGCTGTTTGTGGCCACACAACGATGAGGTCTCCTCTGATGAAGAT
CTGAACTCGGAGGCAGCACTTCCCATCACTGCTCCACAATCTGAACTTTT
TGAATCTCCTGCTGCTACGCTACCTTCTCACCCTGCGGCCTTAACGTCCA
AACCTCCTCCAAATGATGACGAATTTATATTGGAACTGCTGCAGCAATTG
ACTTCTGCCACAGAAACCCCCCTTAAGACAAATGTGAGTTCCAGTTCCAT
GCCAAATCTGCACTCGCCTTCAGAGGAAAAACCCTGCCCACAACTGGAGC
TTCCCGACTTAAGCTTTCTGGAGGAGAACAGTACCGTATGCAAGGAACCC
CCACAAGCATTGAAATCAGAGCTGGGAGTACCTTCAACTGTCGTCTTACC
CGACAGATTAATAAGTCCGCCCAAGGCAAAAGCAGTACAAACTGAGGACA
CCAAAGCCAAGGAACATGTGGCTCATCTGAAGGGAGCTACGTCCCAAAGC
TGGCAAGGCAAAGCTGAAATACCATTACTACCCGCTTGTGTGAAGGCAAG
TGTGAGGATGTCTCCTAGCATCAAATCTAAGGGGTCTCCCTTCAGCAGTC
CGCCCAAGAAAGCAACCACCCAGCCGCAAGGCGCCGACGTTGTCCACACA
GGCCACGACGCACTGCAGCCATGGCTTCACCACCAGCTCGTCGTCGCCCA
ACCGTGTGGTGACCCGCTCTGCCACCATGCTGGCGCTCTTCGGCATCGCG
CAGTCCTCGTTCAGCCTGCAAGCTTTCTAGACCAT

BO10174.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG8229-RE 882 CG8229-PE 1..879 89..967 4380 99.9 Plus
CG8229-RD 1008 CG8229-PD 1..743 89..831 3715 100 Plus
CG33199-RB 240 CG33199-PB 50..188 829..967 680 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG8229-RE 1951 CG8229-RE 308..1259 16..967 4745 99.9 Plus
CG8229-RD 1459 CG8229-RD 308..1123 16..831 4080 100 Plus
CG33199-RB 1523 CG33199-RB 261..399 829..967 680 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8949845..8950660 831..16 4080 100 Minus
2R 25286936 2R 8948805..8948943 967..829 680 99.3 Minus
Blast to na_te.dros performed on 2014-11-27 01:10:40 has no hits.

BO10174.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:46:43 Download gff for BO10174.complete
Subject Subject Range Query Range Percent Splice Strand
CG8229-RE 323..1286 9..978 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:09 Download gff for BO10174.complete
Subject Subject Range Query Range Percent Splice Strand
CG8229-RE 309..1259 17..969 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:32 Download gff for BO10174.complete
Subject Subject Range Query Range Percent Splice Strand
CG8229-RE 327..1277 17..969 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:20:06 Download gff for BO10174.complete
Subject Subject Range Query Range Percent Splice Strand
CG8229-RE 309..1259 17..969 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:20:06 Download gff for BO10174.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8948803..8948941 831..969 97 <- Minus
2R 8949846..8950659 17..830 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:09 Download gff for BO10174.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4836308..4836446 831..969 97 <- Minus
arm_2R 4837351..4838164 17..830 100   Minus

BO10174.pep Sequence

Translation from 16 to 985

> BO10174.pep
MRILGETSEFFGRANQGPPQSSLRMQRLQPGDECLECQSEGRNHKLRYFY
INLEEQLLKCESRSCLWPHNDEVSSDEDLNSEAALPITAPQSELFESPAA
TLPSHPAALTSKPPPNDDEFILELLQQLTSATETPLKTNVSSSSMPNLHS
PSEEKPCPQLELPDLSFLEENSTVCKEPPQALKSELGVPSTVVLPDRLIS
PPKAKAVQTEDTKAKEHVAHLKGATSQSWQGKAEIPLLPACVKASVRMSP
SIKSKGSPFSSPPKKATTQPQGADVVHTGHDALQPWLHHQLVVAQPCGDP
LCHHAGALRHRAVLVQPASFLDH

BO10174.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:20:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG8229-PE 293 CG8229-PE 1..293 25..317 1551 100 Plus
CG8229-PD 335 CG8229-PD 1..248 25..272 1295 100 Plus