Clone Sequence Records
BO10182.5prime Sequence
936 bp (873 high quality bases) assembled on 2006-04-19
> BO10182.5prime
GAAGTTATCAGTCGACATGCTGCTGGCCGCAGCCGGTCCACCGGCTTACG
ACGCCGGAAAACTGTCCAACAATGCCGGATCCGGATCCAGCAACGTGGGC
TCCGGCGGAGTGGGTACGCCCACGGCGTCCTCGTCGCGTCCTAGTGCCGC
TAGTGCCCTGATGAAGACCCTGTCTGTGCGCCTGCATCGAGGCACCGAGT
TCATTAAGGACACCGTTCATAAGGCCCTGGTCATGTCCGCTCCAACGCCT
GTGGCCCCAGCTACAGCTCCTGCGCCCAAGATCGTGGACCACAGCCTAAA
GCGAAAACTAAGCGGCGCTGGCGGGCTGATGGGCTGCAGCAGCATTGGCA
GCATGACCTCATCTATCGCCGGCAGCTCGAGAAGTCACCACTATGCACTG
ACTAGCCAGGTGGCCTCGTCACAGGTGATTCCTTTGCCCAGTCAAGTGCC
AACAGCCGCCTTTCTGCGCACCTACACTGTGGCTCCCACGGCACTCCATC
GATCTGCCGCCGCTCGCAAACGGAATCCCAGCACCGACAGCCTGCTTATG
GACCTGTGCCTCTTTAAGCCCATTCGGCCCATGCCCATAACGCCAATAAA
AATCCACAAGTTCCGCGGATTTGAAGTGAAGAAACCAAAATTTGTCCCCG
CTGGAAATCCAGACAGCGAAGATGATGAGGACAACGACGAAGATGGGACG
GTCCGCAAGCCAAAGCCCAGCAACTTGACATTGCCAACAATTTCGGACTC
GGCCTTCGTTCCGATGCCCTATATAGAAACCACCAACACCGCCATTAACG
CAACCACCACCACTAACAGCGGGAGCAGATCCCGCTCTCTCACACACACA
CCTCAGGCTCTGCCCAGGCCATACCAAGCCAAAGCGTCGTCGTCGCGCTC
CCATGCTCACGGCCAAAAGACGACGCAAGGCCCTGG
BO10182.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:58:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14657-PB | 1335 | CG14657-RB | 1..826 | 17..842 | 4130 | 100 | Plus |
CG14657-PB | 1335 | CG14657-RB | 859..922 | 873..936 | 320 | 100 | Plus |
CG14657-PB | 1335 | CG14657-RB | 827..858 | 842..873 | 160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:20:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14657-RC | 2975 | CG14657-RC | 514..1435 | 17..936 | 4560 | 99.8 | Plus |
CG14657-RB | 2414 | CG14657-RB | 514..1435 | 17..936 | 4560 | 99.8 | Plus |
CG14657-RD | 2888 | CG14657-RD | 514..1101 | 17..604 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:19:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4820333..4820919 | 603..17 | 2935 | 100 | Minus |
3R | 32079331 | 3R | 4819520..4819739 | 936..719 | 1000 | 99.1 | Minus |
3R | 32079331 | 3R | 4819794..4819910 | 720..604 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 14:20:00 has no hits.
BO10182.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:32:19 Download gff for
BO10182.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-PB | 1..922 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:43:34 Download gff for
BO10182.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-PB | 1..922 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:36:41 Download gff for
BO10182.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 508..1435 | 8..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:56:47 Download gff for
BO10182.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 508..1435 | 8..936 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:56:47 Download gff for
BO10182.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4819520..4819737 | 721..936 | 99 | <- | Minus |
3R | 4819794..4819910 | 604..720 | 100 | <- | Minus |
3R | 4820333..4820925 | 8..603 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:36:41 Download gff for
BO10182.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 645242..645459 | 721..936 | 99 | <- | Minus |
arm_3R | 645516..645632 | 604..720 | 100 | <- | Minus |
arm_3R | 646055..646647 | 8..603 | 99 | | Minus |
BO10182.complete Sequence
1366 bp (1366 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631673
> BO10182.complete
GAAGTTATCAGTCGACATGCTGCTGGCCGCAGCCGGTCCACCGGCTTACG
ACGCCGGAAAACTGTCCAACAATGCCGGATCCGGATCCAGCAACGTGGGC
TCCGGCGGAGTGGGTACGCCCACGGCGTCCTCGTCGCGTCCTAGTGCCGC
TAGTGCCCTGATGAAGACCCTGTCTGTGCGCCTGCATCGAGGCACCGAGT
TCATTAAGGACACCGTTCATAAGGCCCTGGTCATGTCCGCTCCAACGCCT
GTGGCCCCAGCTACAGCTCCTGCGCCCAAGATCGTGGACCACAGCCTAAA
GCGAAAACTAAGCGGCGCTGGCGGGCTGATGGGCTGCAGCAGCATTGGCA
GCATGACCTCATCTATCGCCGGCAGCTCGAGAAGTCACCACTATGCACTG
ACTAGCCAGGTGGCCTCGTCACAGGTGATTCCTTTGCCCAGTCAAGTGCC
AACAGCCGCCTTTCTGCGCACCTACACTGTGGCTCCCACGGCACTCCATC
GATCTGCCGCCGCTCGCAAACGGAATCCCAGCACCGACAGCCTGCTTATG
GACCTGTGCCTCTTTAAGCCCATTCGGCCCATGCCCATAACGCCAATAAA
AATCCACAAGTTCCGCGGATTTGAAGTGAAGAAACCAAAATTTGTCCCCG
CTGGAAATCCAGACAGCGAAGATGATGAGGACAACGACGAAGATGGGACG
GTCCGCAAGCCAAAGCCCAGCAACTTGACATTGCCAACAATTTCGGACTC
GGCCTTCGTTCCGATGCCCTATATAGAAACCACCAACACCGCCATTAACG
CAACCACCACCACTAACAGCGGGAGCAGATCCCGCTCTCTCAACACACAC
ACCTCAGGCTCTGCCCAGGCCATAACCAAGCCAAAGCGTCGTCGTCGCGC
TCCCATGCTCACGGCCAAAAGACGACGCAAGGCCCTGGATACGGAATTAA
CAACTTCAGCAGATGCTGGAACTGAAGACAAAGCTCCTGCCGTGCGCAAA
GCGACGGCAGCACGCGGAGGATCCAAGCGCAGTCGAGGAGAATCGATTAC
GGCTCCTACGCCAGCGGAACCAATCAAATCTCCAGTAGCAATAAAAGCTC
CGACCAAGCGCAAATCAACCTCTAGAAGTGAAGCTGCAAAACGTAGTCGT
GTAGCCTCTGTGCAGAATGACACTGTTCTCACAGCGACATCCACCACTTC
AGCAGATTCAATTAGAAAAGCCGCAACCAAGCGCATTGCTGCTAATGAAA
AAGTCGCCAAGCGCAGTCGTGGTTCCGCAGCCTTGTCTGCGCGTCCTTCC
CCGCCAATGACACGTCAGCGGGCTCGTCAGCAGATCTCCGCAAGCACCGC
AAGCTTTCTAGACCAT
BO10182.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:40:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14657-RC | 1335 | CG14657-PC | 1..1332 | 17..1348 | 6660 | 100 | Plus |
CG14657-RB | 1335 | CG14657-PB | 1..1332 | 17..1348 | 6660 | 100 | Plus |
CG14657-RD | 591 | CG14657-PD | 1..588 | 17..604 | 2940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:40:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14657-RC | 2975 | CG14657-RC | 514..1845 | 17..1348 | 6660 | 100 | Plus |
CG14657-RB | 2414 | CG14657-RB | 514..1845 | 17..1348 | 6660 | 100 | Plus |
CG14657-RD | 2888 | CG14657-RD | 1309..2053 | 604..1348 | 3725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:40:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4819110..4819739 | 1348..719 | 3150 | 100 | Minus |
3R | 32079331 | 3R | 4820333..4820919 | 603..17 | 2935 | 100 | Minus |
3R | 32079331 | 3R | 4819794..4819910 | 720..604 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:40:51 has no hits.
BO10182.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:58:29 Download gff for
BO10182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 1..1335 | 17..1352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:16:05 Download gff for
BO10182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 504..1850 | 8..1360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:00 Download gff for
BO10182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 514..1845 | 17..1350 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:58:29 Download gff for
BO10182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 504..1850 | 8..1360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:13 Download gff for
BO10182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 514..1845 | 17..1350 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:13 Download gff for
BO10182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4819108..4819737 | 721..1350 | 99 | <- | Minus |
3R | 4819794..4819910 | 604..720 | 100 | <- | Minus |
3R | 4820333..4820919 | 17..603 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:00 Download gff for
BO10182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 644830..645459 | 721..1350 | 99 | <- | Minus |
arm_3R | 645516..645632 | 604..720 | 100 | <- | Minus |
arm_3R | 646055..646641 | 17..603 | 100 | | Minus |
BO10182.pep Sequence
Translation from 16 to 1366
> BO10182.pep
MLLAAAGPPAYDAGKLSNNAGSGSSNVGSGGVGTPTASSSRPSAASALMK
TLSVRLHRGTEFIKDTVHKALVMSAPTPVAPATAPAPKIVDHSLKRKLSG
AGGLMGCSSIGSMTSSIAGSSRSHHYALTSQVASSQVIPLPSQVPTAAFL
RTYTVAPTALHRSAAARKRNPSTDSLLMDLCLFKPIRPMPITPIKIHKFR
GFEVKKPKFVPAGNPDSEDDEDNDEDGTVRKPKPSNLTLPTISDSAFVPM
PYIETTNTAINATTTTNSGSRSRSLNTHTSGSAQAITKPKRRRRAPMLTA
KRRRKALDTELTTSADAGTEDKAPAVRKATAARGGSKRSRGESITAPTPA
EPIKSPVAIKAPTKRKSTSRSEAAKRSRVASVQNDTVLTATSTTSADSIR
KAATKRIAANEKVAKRSRGSAALSARPSPPMTRQRARQQISASTASFLDH
BO10182.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:50:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14657-PC | 444 | CG14657-PC | 1..444 | 1..444 | 2210 | 100 | Plus |
CG14657-PB | 444 | CG14657-PB | 1..444 | 1..444 | 2210 | 100 | Plus |
CG14657-PD | 196 | CG14657-PD | 1..196 | 1..196 | 981 | 100 | Plus |