Clone BO10182 Report

Search the DGRC for BO10182

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:101
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG14657-RB
Protein status:BO10182.pep: validated full length
Sequenced Size:1366

Clone Sequence Records

BO10182.5prime Sequence

936 bp (873 high quality bases) assembled on 2006-04-19

> BO10182.5prime
GAAGTTATCAGTCGACATGCTGCTGGCCGCAGCCGGTCCACCGGCTTACG
ACGCCGGAAAACTGTCCAACAATGCCGGATCCGGATCCAGCAACGTGGGC
TCCGGCGGAGTGGGTACGCCCACGGCGTCCTCGTCGCGTCCTAGTGCCGC
TAGTGCCCTGATGAAGACCCTGTCTGTGCGCCTGCATCGAGGCACCGAGT
TCATTAAGGACACCGTTCATAAGGCCCTGGTCATGTCCGCTCCAACGCCT
GTGGCCCCAGCTACAGCTCCTGCGCCCAAGATCGTGGACCACAGCCTAAA
GCGAAAACTAAGCGGCGCTGGCGGGCTGATGGGCTGCAGCAGCATTGGCA
GCATGACCTCATCTATCGCCGGCAGCTCGAGAAGTCACCACTATGCACTG
ACTAGCCAGGTGGCCTCGTCACAGGTGATTCCTTTGCCCAGTCAAGTGCC
AACAGCCGCCTTTCTGCGCACCTACACTGTGGCTCCCACGGCACTCCATC
GATCTGCCGCCGCTCGCAAACGGAATCCCAGCACCGACAGCCTGCTTATG
GACCTGTGCCTCTTTAAGCCCATTCGGCCCATGCCCATAACGCCAATAAA
AATCCACAAGTTCCGCGGATTTGAAGTGAAGAAACCAAAATTTGTCCCCG
CTGGAAATCCAGACAGCGAAGATGATGAGGACAACGACGAAGATGGGACG
GTCCGCAAGCCAAAGCCCAGCAACTTGACATTGCCAACAATTTCGGACTC
GGCCTTCGTTCCGATGCCCTATATAGAAACCACCAACACCGCCATTAACG
CAACCACCACCACTAACAGCGGGAGCAGATCCCGCTCTCTCACACACACA
CCTCAGGCTCTGCCCAGGCCATACCAAGCCAAAGCGTCGTCGTCGCGCTC
CCATGCTCACGGCCAAAAGACGACGCAAGGCCCTGG

BO10182.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:58:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-PB 1335 CG14657-RB 1..826 17..842 4130 100 Plus
CG14657-PB 1335 CG14657-RB 859..922 873..936 320 100 Plus
CG14657-PB 1335 CG14657-RB 827..858 842..873 160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:20:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-RC 2975 CG14657-RC 514..1435 17..936 4560 99.8 Plus
CG14657-RB 2414 CG14657-RB 514..1435 17..936 4560 99.8 Plus
CG14657-RD 2888 CG14657-RD 514..1101 17..604 2940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:19:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4820333..4820919 603..17 2935 100 Minus
3R 32079331 3R 4819520..4819739 936..719 1000 99.1 Minus
3R 32079331 3R 4819794..4819910 720..604 585 100 Minus
Blast to na_te.dros performed on 2015-02-11 14:20:00 has no hits.

BO10182.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:32:19 Download gff for BO10182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-PB 1..922 17..936 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:43:34 Download gff for BO10182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-PB 1..922 17..936 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:36:41 Download gff for BO10182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 508..1435 8..936 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:56:47 Download gff for BO10182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 508..1435 8..936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:56:47 Download gff for BO10182.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4819520..4819737 721..936 99 <- Minus
3R 4819794..4819910 604..720 100 <- Minus
3R 4820333..4820925 8..603 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:36:41 Download gff for BO10182.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 645242..645459 721..936 99 <- Minus
arm_3R 645516..645632 604..720 100 <- Minus
arm_3R 646055..646647 8..603 99   Minus

BO10182.complete Sequence

1366 bp (1366 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631673

> BO10182.complete
GAAGTTATCAGTCGACATGCTGCTGGCCGCAGCCGGTCCACCGGCTTACG
ACGCCGGAAAACTGTCCAACAATGCCGGATCCGGATCCAGCAACGTGGGC
TCCGGCGGAGTGGGTACGCCCACGGCGTCCTCGTCGCGTCCTAGTGCCGC
TAGTGCCCTGATGAAGACCCTGTCTGTGCGCCTGCATCGAGGCACCGAGT
TCATTAAGGACACCGTTCATAAGGCCCTGGTCATGTCCGCTCCAACGCCT
GTGGCCCCAGCTACAGCTCCTGCGCCCAAGATCGTGGACCACAGCCTAAA
GCGAAAACTAAGCGGCGCTGGCGGGCTGATGGGCTGCAGCAGCATTGGCA
GCATGACCTCATCTATCGCCGGCAGCTCGAGAAGTCACCACTATGCACTG
ACTAGCCAGGTGGCCTCGTCACAGGTGATTCCTTTGCCCAGTCAAGTGCC
AACAGCCGCCTTTCTGCGCACCTACACTGTGGCTCCCACGGCACTCCATC
GATCTGCCGCCGCTCGCAAACGGAATCCCAGCACCGACAGCCTGCTTATG
GACCTGTGCCTCTTTAAGCCCATTCGGCCCATGCCCATAACGCCAATAAA
AATCCACAAGTTCCGCGGATTTGAAGTGAAGAAACCAAAATTTGTCCCCG
CTGGAAATCCAGACAGCGAAGATGATGAGGACAACGACGAAGATGGGACG
GTCCGCAAGCCAAAGCCCAGCAACTTGACATTGCCAACAATTTCGGACTC
GGCCTTCGTTCCGATGCCCTATATAGAAACCACCAACACCGCCATTAACG
CAACCACCACCACTAACAGCGGGAGCAGATCCCGCTCTCTCAACACACAC
ACCTCAGGCTCTGCCCAGGCCATAACCAAGCCAAAGCGTCGTCGTCGCGC
TCCCATGCTCACGGCCAAAAGACGACGCAAGGCCCTGGATACGGAATTAA
CAACTTCAGCAGATGCTGGAACTGAAGACAAAGCTCCTGCCGTGCGCAAA
GCGACGGCAGCACGCGGAGGATCCAAGCGCAGTCGAGGAGAATCGATTAC
GGCTCCTACGCCAGCGGAACCAATCAAATCTCCAGTAGCAATAAAAGCTC
CGACCAAGCGCAAATCAACCTCTAGAAGTGAAGCTGCAAAACGTAGTCGT
GTAGCCTCTGTGCAGAATGACACTGTTCTCACAGCGACATCCACCACTTC
AGCAGATTCAATTAGAAAAGCCGCAACCAAGCGCATTGCTGCTAATGAAA
AAGTCGCCAAGCGCAGTCGTGGTTCCGCAGCCTTGTCTGCGCGTCCTTCC
CCGCCAATGACACGTCAGCGGGCTCGTCAGCAGATCTCCGCAAGCACCGC
AAGCTTTCTAGACCAT

BO10182.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-RC 1335 CG14657-PC 1..1332 17..1348 6660 100 Plus
CG14657-RB 1335 CG14657-PB 1..1332 17..1348 6660 100 Plus
CG14657-RD 591 CG14657-PD 1..588 17..604 2940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:40:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-RC 2975 CG14657-RC 514..1845 17..1348 6660 100 Plus
CG14657-RB 2414 CG14657-RB 514..1845 17..1348 6660 100 Plus
CG14657-RD 2888 CG14657-RD 1309..2053 604..1348 3725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4819110..4819739 1348..719 3150 100 Minus
3R 32079331 3R 4820333..4820919 603..17 2935 100 Minus
3R 32079331 3R 4819794..4819910 720..604 585 100 Minus
Blast to na_te.dros performed on 2014-11-27 19:40:51 has no hits.

BO10182.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:58:29 Download gff for BO10182.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 1..1335 17..1352 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:16:05 Download gff for BO10182.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 504..1850 8..1360 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:00 Download gff for BO10182.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 514..1845 17..1350 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:58:29 Download gff for BO10182.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 504..1850 8..1360 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:13 Download gff for BO10182.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 514..1845 17..1350 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:13 Download gff for BO10182.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4819108..4819737 721..1350 99 <- Minus
3R 4819794..4819910 604..720 100 <- Minus
3R 4820333..4820919 17..603 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:00 Download gff for BO10182.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 644830..645459 721..1350 99 <- Minus
arm_3R 645516..645632 604..720 100 <- Minus
arm_3R 646055..646641 17..603 100   Minus

BO10182.pep Sequence

Translation from 16 to 1366

> BO10182.pep
MLLAAAGPPAYDAGKLSNNAGSGSSNVGSGGVGTPTASSSRPSAASALMK
TLSVRLHRGTEFIKDTVHKALVMSAPTPVAPATAPAPKIVDHSLKRKLSG
AGGLMGCSSIGSMTSSIAGSSRSHHYALTSQVASSQVIPLPSQVPTAAFL
RTYTVAPTALHRSAAARKRNPSTDSLLMDLCLFKPIRPMPITPIKIHKFR
GFEVKKPKFVPAGNPDSEDDEDNDEDGTVRKPKPSNLTLPTISDSAFVPM
PYIETTNTAINATTTTNSGSRSRSLNTHTSGSAQAITKPKRRRRAPMLTA
KRRRKALDTELTTSADAGTEDKAPAVRKATAARGGSKRSRGESITAPTPA
EPIKSPVAIKAPTKRKSTSRSEAAKRSRVASVQNDTVLTATSTTSADSIR
KAATKRIAANEKVAKRSRGSAALSARPSPPMTRQRARQQISASTASFLDH

BO10182.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-PC 444 CG14657-PC 1..444 1..444 2210 100 Plus
CG14657-PB 444 CG14657-PB 1..444 1..444 2210 100 Plus
CG14657-PD 196 CG14657-PD 1..196 1..196 981 100 Plus