Clone Sequence Records
BO10185.3prime Sequence
896 bp (780 high quality bases) assembled on 2006-04-19
> BO10185.3prime
ATGGTCTAGAAAGCTTGCCTTAAGTACATCAAATATGCTGAGGTTGTCCT
CCCGACTACGTTGCTCCATGTGCGCCTTGGCGATGGCTATGAACTGTGGA
CGGGAAAGCATTGAATAGGCGGGTACCAGCAACGATGAGGCAAGCATGTG
CAGCTCCTTGTGCCCACTGCAGAACATATCGATGCCTAGTTCCAGGGCGC
TTCCAAAGTCCGATTCATCAACTGCTATGTTGGCTGCGTTGGCCACCGGC
TGCAGCTTCTCCAGAACCGCCTGCTTGGCGGCTCCATTATCGACGTCCTT
CCGCTCAAGCATTGCCAGCATCTTCTTGAGTTCGGAATCGCTGACAGCCA
GCGGGCGGTATCCCACTTCTGTCTTCTGGTCAAAGGGCACAACAATGCCG
GCTCGGTGGAATGTCTTGGCCACAACACGCTTGTTGCGCTCCCGCTGCAG
TCGGTCCAGCTGGGCCAGTTCTAGGGAATTGTCACTCAGGTATTTTGCCA
CCGCCTTTTTGGTCCCCGCCAACTGCCCGCATGAGAACGGAGTGGCCGCA
AAATCGTGCTCCAGGTAGTAGAGGAAAGCATCGAAGGCATTTCCAGCGAC
GAATTGGAACTGGCAGCCTTTCGCAGAGTCGTTGCGGGCTATTAAGAGAT
TTTCCTTGTCCTGCGGCACATCGCGCCAGTAACCGTAGTGAATCCCAGTG
CCTCGGCGCACGAAGATCGTCTGAAATTCTGGTGGATCGTAGTAAAAACG
CCAGTGGCGCAGGTAGTCTCCCGGTTCGCCTAGTTTGGCGCCGTGAAATT
TACCGGCTAGGAACTCAAAGGGACCCACCAACTGCAGTTGAAATACTTTG
TCTAGGTGCTCCCAGCCAGCATCCTTGGGCTTCGCAGGATCAATTT
BO10185.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:58:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1218-PA | 1350 | CG1218-RA | 470..1347 | 896..19 | 4340 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:53:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1218-RA | 1505 | CG1218-RA | 564..1441 | 896..19 | 4360 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:53:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5792442..5793319 | 896..19 | 4360 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:53:51 has no hits.
BO10185.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:32:22 Download gff for
BO10185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-PA | 470..1350 | 18..896 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:43:37 Download gff for
BO10185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-PA | 470..1350 | 18..896 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:16:18 Download gff for
BO10185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 564..1446 | 11..896 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:47:36 Download gff for
BO10185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 564..1446 | 11..896 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:47:36 Download gff for
BO10185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5792442..5793324 | 11..896 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:16:18 Download gff for
BO10185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1618164..1619046 | 11..896 | 99 | | Minus |
BO10185.5prime Sequence
864 bp (817 high quality bases) assembled on 2006-04-19
> BO10185.5prime
GAAGTTATCAGTCGACATGCCAAAAGAAGATTGCAAATACTGGGATAAGT
GCTATCAGCAGAATCCCGCACATTTGTCCAAATACAATCATCCGAAAAAG
CAACAAGAACACGAAGTGGACGGCGCAGAAGGCAAAAAAGTGGCGCCAAA
AAGAAGTGCATCCTCGCAGTCTGGTGAACAGAAAAAGGAAGAACAAACGG
AGCCGGTGAACAAGGATAAGTCCAATACGAGTGCTTCAAGTACGGAGATG
GTGAACAAGGATACAGCCAAGGGCAGTTATGAAGCCGAAACCGAGGAGCT
TCACAAAGAGGCCATGAGCAACATATCCGGAAAGAACTACATGGAGATCT
TGGAGAAGCGCATCCGCCTGTCCGTGCAGAAGGAGTACGACAATCTCTGC
GAGTCCAACGAGTTCATTCGACACAAGTTCCTTGTCGAAATGCCGCCGGA
CTTCTACGAATTTTGGAAGTTTGTGGGAAGCTTAAAAATTGATCCTGCGA
AGCCCAAGGATGCTGGCTTGGAGCACCTAGACAAAGTATTTCAACTGCAG
TTGGTGGGTCCCTTTGAGTTCCTAGCCGGTAAATTTCACGGCGCCAAACT
AGGCGAACCGGGAGACTACCTGCGCCACTGGCGTTTTTACTACGATCCAC
CAGAATTTCAGACGATCTTCGTGCGCCGAGGCACTGGGATTCACTACGGT
TACTGGCGCGATGTGCCGCAGGACAAGGAAAATCTCTTAATAGCCCGCAA
CGACTCTGCGAAAGGCTGCCAGTTCCAATTCGTCGCTGGAAATGCCTTCG
ATGCTTTCCTCTACTACCTGGAGCACGATTTTGCGGGCACTCCGTTCTCA
TGCGGGCAGTTGGC
BO10185.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:58:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1218-PA | 1350 | CG1218-RA | 1..848 | 17..864 | 4215 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 04:20:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1218-RA | 1505 | CG1218-RA | 95..942 | 17..864 | 4225 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 04:20:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5791973..5792820 | 17..864 | 4225 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 04:20:05 has no hits.
BO10185.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:32:23 Download gff for
BO10185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-PA | 1..848 | 17..864 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:43:39 Download gff for
BO10185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-PA | 1..848 | 17..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:51:14 Download gff for
BO10185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 93..942 | 14..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:22:58 Download gff for
BO10185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 93..942 | 14..864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:22:58 Download gff for
BO10185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5791971..5792820 | 14..864 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:51:14 Download gff for
BO10185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1617693..1618542 | 14..864 | 99 | | Plus |
BO10185.complete Sequence
1381 bp assembled on 2008-08-15
GenBank Submission: FJ631675
> BO10185.complete
GAAGTTATCAGTCGACATGCCAAAAGAAGATTGCAAATACTGGGATAAGT
GCTATCAGCAGAATCCCGCACATTTGTCCAAATACAATCATCCGAAAAAG
CAACAAGAACACGAAGTGGACGGCGCAGAAGGCAAAAAAGTGGCGCCAAA
AAGAAGTGCATCCTCGCAGTCTGGTGAACAGAAAAAGGAAGAACAAACGG
AGCCGGTGAACAAGGATAAGTCCAATACGAGTGCTTCAAGTACGGAGATG
GTGAACAAGGATACAGCCAAGGGCAGTTATGAAGCCGAAACCGAGGAGCT
TCACAAAGAGGCCATGAGCAACATATCCGGAAAGAACTACATGGAGATCT
TGGAGAAGCGCATCCGCCTGTCCGTGCAGAAGGAGTACGACAATCTCTGC
GAGTCCAACGAGTTCATTCGACACAAGTTCCTTGTCGAAATGCCGCCGGA
CTTCTACGAATTTTGGAAGTTTGTGGGAAGCTTAAAAATTGATCCTGCGA
AGCCCAAGGATGCTGGCTTGGAGCACCTAGACAAAGTATTTCAACTGCAG
TTGGTGGGTCCCTTTGAGTTCCTAGCCGGTAAATTTCACGGCGCCAAACT
AGGCGAACCGGGAGACTACCTGCGCCACTGGCGTTTTTACTACGATCCAC
CAGAATTTCAGACGATCTTCGTGCGCCGAGGCACTGGGATTCACTACGGT
TACTGGCGCGATGTGCCGCAGGACAAGGAAAATCTCTTAATAGCCCGCAA
CGACTCTGCGAAAGGCTGCCAGTTCCAATTCGTCGCTGGAAATGCCTTCG
ATGCTTTCCTCTACTACCTGGAGCACGATTTTGCGGCCACTCCGTTCTCA
TGCGGGCAGTTGGCGGGGACCAAAAAGGCGGTGGCAAAATACCTGAGTGA
CAATTCCCTAGAACTGGCCCAGCTGGACCGACTGCAGCGGGAGCGCAACA
AGCGTGTTGTGGCCAAGACATTCCACCGAGCCGGCATTGTTGTGCCCTTT
GACCAGAAGACAGAAGTGGGATACCGCCCGCTGGCTGTCAGCGATTCCGA
ACTCAAGAAGATGCTGGCAATGCTTGAGCGGAAGGACGTCGATAATGGAG
CCGCCAAGCAGGCGGTTCTGGAGAAGCTGCAGCCGGTGGCCAACGCAGCC
AACATAGCAGTTGATGAATCGGACTTTGGAAGCGCCCTGGAACTAGGCAT
CGATATGTTCTGCAGTGGGCACAAGGAGCTGCACATGCTTGCCTCATCGT
TGCTGGTACCCGCCTATTCAATGCTTTCCCGTCCACAGTTCATAGCCATC
GCCAAGGCGCACATGGAGCAACGTAGTCGGGAGGACAACCTCAGCATATT
TGATGTACTTAAGGCAAGCTTTCTAGACCAT
BO10185.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:03:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1218-RA | 1350 | CG1218-PA | 1..1347 | 17..1363 | 6720 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1218-RA | 1505 | CG1218-RA | 95..1441 | 17..1363 | 6720 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5791973..5793319 | 17..1363 | 6720 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:03:36 has no hits.
BO10185.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:45:24 Download gff for
BO10185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 86..1439 | 14..1371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:40 Download gff for
BO10185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 95..1441 | 17..1365 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:05:36 Download gff for
BO10185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 88..1434 | 17..1365 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:17:28 Download gff for
BO10185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 95..1441 | 17..1365 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:17:28 Download gff for
BO10185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5791973..5793319 | 17..1365 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:40 Download gff for
BO10185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1617695..1619041 | 17..1365 | 99 | | Plus |
BO10185.pep Sequence
Translation from 16 to 1381
> BO10185.pep
MPKEDCKYWDKCYQQNPAHLSKYNHPKKQQEHEVDGAEGKKVAPKRSASS
QSGEQKKEEQTEPVNKDKSNTSASSTEMVNKDTAKGSYEAETEELHKEAM
SNISGKNYMEILEKRIRLSVQKEYDNLCESNEFIRHKFLVEMPPDFYEFW
KFVGSLKIDPAKPKDAGLEHLDKVFQLQLVGPFEFLAGKFHGAKLGEPGD
YLRHWRFYYDPPEFQTIFVRRGTGIHYGYWRDVPQDKENLLIARNDSAKG
CQFQFVAGNAFDAFLYYLEHDFAATPFSCGQLAGTKKAVAKYLSDNSLEL
AQLDRLQRERNKRVVAKTFHRAGIVVPFDQKTEVGYRPLAVSDSELKKML
AMLERKDVDNGAAKQAVLEKLQPVANAANIAVDESDFGSALELGIDMFCS
GHKELHMLASSLLVPAYSMLSRPQFIAIAKAHMEQRSREDNLSIFDVLKA
SFLDH
BO10185.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:28:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1218-PA | 449 | CG1218-PA | 1..449 | 1..449 | 2356 | 100 | Plus |
