Clone BO10221 Report

Search the DGRC for BO10221

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:102
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG11284-RA
Protein status:BO10221.pep: validated full length
Sequenced Size:784

Clone Sequence Records

BO10221.3prime Sequence

782 bp (781 high quality bases) assembled on 2006-04-19

> BO10221.3prime
ATGGTCTAGAAAGCTTGCTAACTTGGACTTTGGATTGGTGTTGCGCGCAA
AGAAGATTTCCGGATCCTTGTGCGGACGCTGGATCTCGCGATAATTGTTG
ACTATCTTTTTGGACTCATCTTTGGGACACGATTGCAAATTGCGAAACAC
CTGAACCTGGCCGCGAGACACATAGATGGGGGTGCGGTATATGATCCAGG
TGACACTCTCAAAGTACGGCGCCGTTGTCAGCGAACCCTTGTACGTGTAA
TAATGTTTGCTCAGCTCCTGCAGACCAATCCATGATAGGCAATCGGAATC
CAGCGATGCACTCGTATGGATCTTTTGAACGATGCGGATGCCCTCGGTGA
TCTTCTTGAACTCGGGACAGTCCTTCTCGCCGCAGGCCTGAATAAAGAAT
GCGACGACGGCCAGGCCATCGGGCTTGTTCTTGGCCTCCGTGAAGTCCTT
GTACTTCGAATTGTAGTGGACGGCATGGGCCTCCATTGAGTACTTCATGC
CCTCCAGTGTATGCTCGCAGCCGGATTCATCGCAGTCCGACCAATGGAAG
TGCAGCTGCTCGAACACGTACATGTCCTGCTCCAGGGCACCGCCGATTAT
GTATGGCTGTTGTTTTCGCTTGCTGAATGTGACCATTGCGGAGGTGCCTG
TGTTCTGTACCCGGGCCACGCCCACCGGCTCCCAATGGCCATGGTACTCT
AGTGGATCCACATCGTCAATGTGCTCGATGGCACGGTTGCTGATCTCAAT
TGGGGATTGTACGGGCATGTCGACTGATAACT

BO10221.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG11284-PA 753 CG11284-RA 1..750 768..19 3750 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:20:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG11284-RE 2309 CG11284-RE 974..1723 768..19 3750 100 Minus
CG11284-RD 1650 CG11284-RD 315..1064 768..19 3750 100 Minus
CG11284-RC 1897 CG11284-RC 562..1311 768..19 3750 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:20:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8687268..8687742 768..294 2375 100 Minus
X 23542271 X 8688034..8688174 159..19 705 100 Minus
X 23542271 X 8687817..8687956 294..155 700 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:20:29 has no hits.

BO10221.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:33:20 Download gff for BO10221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11284-PA 1..753 15..768 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:44:58 Download gff for BO10221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11284-PA 1..753 15..768 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:48:19 Download gff for BO10221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11284-RB 460..1218 15..775 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:51:54 Download gff for BO10221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11284-RC 556..1314 15..775 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:51:54 Download gff for BO10221.3prime
Subject Subject Range Query Range Percent Splice Strand
X 8687262..8687742 294..775 99 -> Minus
X 8687818..8687954 157..293 100 -> Minus
X 8688037..8688177 15..156 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:48:19 Download gff for BO10221.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8581295..8581775 294..775 99 -> Minus
arm_X 8581851..8581987 157..293 100 -> Minus
arm_X 8582070..8582210 15..156 98   Minus

BO10221.5prime Sequence

782 bp (781 high quality bases) assembled on 2006-04-19

> BO10221.5prime
GAAGTTATCAGTCGACATGCCCGTACAATCCCCAATTGAGATCAGCAACC
GTGCCATCGAGCACATTGACGATGTGGATCCACTAGAGTACCATGGCCAT
TGGGAGCCGGTGGGCGTGGCCCGGGTACAGAACACAGGCACCTCCGCAAT
GGTCACATTCAGCAAGCGAAAACAACAGCCATACATAATCGGCGGTGCCC
TGGAGCAGGACATGTACGTGTTCGAGCAGCTGCACTTCCATTGGTCGGAC
TGCGATGAATCCGGCTGCGAGCATACACTGGAGGGCATGAAGTACTCAAT
GGAGGCCCATGCCGTCCACTACAATTCGAAGTACAAGGACTTCACGGAGG
CCAAGAACAAGCCCGATGGCCTGGCCGTCGTCGCATTCTTTATTCAGGCC
TGCGGCGAGAAGGACTGTCCCGAGTTCAAGAAGATCACCGAGGGCATCCG
CATCGTTCAAAAGATCCATACGAGTGCATCGCTGGATTCCGATTGCCTAT
CATGGATTGGTCTGCAGGAGCTGAGCAAACATTATTACACGTACAAGGGT
TCGCTGACAACGGCGCCGTACTTTGAGAGTGTCACCTGGATCATATACCG
CACCCCCATCTATGTGTCTCGCGGCCAGGTTCAGGTGTTTCGCAATTTGC
AATCGTGTCCCAAAGATGAGTCCAAAAAGATAGTCAACAATTATCGCGAG
ATCCAGCGTCCGCACAAGGATCCGGAAATCTTCTTTGCGCGCAACACCAA
TCCAAAGTCCAAGTTAGCAAGCTTTCTAGACC

BO10221.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG11284-PA 753 CG11284-RA 1..750 17..766 3750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:21:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11284-RE 2309 CG11284-RE 974..1723 17..766 3750 100 Plus
CG11284-RD 1650 CG11284-RD 315..1064 17..766 3750 100 Plus
CG11284-RC 1897 CG11284-RC 562..1311 17..766 3750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:21:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8687268..8687742 17..491 2375 100 Plus
X 23542271 X 8688034..8688174 626..766 705 100 Plus
X 23542271 X 8687817..8687956 491..630 700 100 Plus
Blast to na_te.dros performed on 2015-02-13 00:21:37 has no hits.

BO10221.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:33:21 Download gff for BO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11284-PA 1..753 17..770 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:44:59 Download gff for BO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11284-PA 1..753 17..770 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:58:11 Download gff for BO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11284-RB 460..1218 10..770 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:44:58 Download gff for BO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11284-RC 556..1314 10..770 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:44:58 Download gff for BO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8687262..8687742 10..491 99 -> Plus
X 8687818..8687954 492..628 100 -> Plus
X 8688037..8688177 629..770 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:58:11 Download gff for BO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8581295..8581775 10..491 99 -> Plus
arm_X 8581851..8581987 492..628 100 -> Plus
arm_X 8582070..8582210 629..770 98   Plus

BO10221.complete Sequence

784 bp (784 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ631685

> BO10221.complete
GAAGTTATCAGTCGACATGCCCGTACAATCCCCAATTGAGATCAGCAACC
GTGCCATCGAGCACATTGACGATGTGGATCCACTAGAGTACCATGGCCAT
TGGGAGCCGGTGGGCGTGGCCCGGGTACAGAACACAGGCACCTCCGCAAT
GGTCACATTCAGCAAGCGAAAACAACAGCCATACATAATCGGCGGTGCCC
TGGAGCAGGACATGTACGTGTTCGAGCAGCTGCACTTCCATTGGTCGGAC
TGCGATGAATCCGGCTGCGAGCATACACTGGAGGGCATGAAGTACTCAAT
GGAGGCCCATGCCGTCCACTACAATTCGAAGTACAAGGACTTCACGGAGG
CCAAGAACAAGCCCGATGGCCTGGCCGTCGTCGCATTCTTTATTCAGGCC
TGCGGCGAGAAGGACTGTCCCGAGTTCAAGAAGATCACCGAGGGCATCCG
CATCGTTCAAAAGATCCATACGAGTGCATCGCTGGATTCCGATTGCCTAT
CATGGATTGGTCTGCAGGAGCTGAGCAAACATTATTACACGTACAAGGGT
TCGCTGACAACGGCGCCGTACTTTGAGAGTGTCACCTGGATCATATACCG
CACCCCCATCTATGTGTCTCGCGGCCAGGTTCAGGTGTTTCGCAATTTGC
AATCGTGTCCCAAAGATGAGTCCAAAAAGATAGTCAACAATTATCGCGAG
ATCCAGCGTCCGCACAAGGATCCGGAAATCTTCTTTGCGCGCAACACCAA
TCCAAAGTCCAAGTTAGCAAGCTTTCTAGACCAT

BO10221.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:02:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG11284-RE 753 CG11284-PE 1..750 17..766 3750 100 Plus
CG11284-RD 753 CG11284-PD 1..750 17..766 3750 100 Plus
CG11284-RC 753 CG11284-PC 1..750 17..766 3750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG11284-RE 2309 CG11284-RE 974..1723 17..766 3750 100 Plus
CG11284-RD 1650 CG11284-RD 315..1064 17..766 3750 100 Plus
CG11284-RC 1897 CG11284-RC 562..1311 17..766 3750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:02:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8687268..8687742 17..491 2375 100 Plus
X 23542271 X 8688034..8688174 626..766 705 100 Plus
X 23542271 X 8687817..8687956 491..630 700 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:02:10 has no hits.

BO10221.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:56:08 Download gff for BO10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11284-RA 1..753 17..770 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:28:37 Download gff for BO10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11284-RA 638..1396 10..770 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:55:01 Download gff for BO10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11284-RB 466..1215 17..768 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:56:08 Download gff for BO10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11284-RA 638..1396 10..770 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:09:42 Download gff for BO10221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11284-RC 562..1311 17..768 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:09:42 Download gff for BO10221.complete
Subject Subject Range Query Range Percent Splice Strand
X 8687268..8687742 17..491 100 -> Plus
X 8687818..8687954 492..628 100 -> Plus
X 8688037..8688174 629..768 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:55:01 Download gff for BO10221.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8581301..8581775 17..491 100 -> Plus
arm_X 8581851..8581987 492..628 100 -> Plus
arm_X 8582070..8582207 629..768 98   Plus

BO10221.pep Sequence

Translation from 16 to 784

> BO10221.pep
MPVQSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSK
RKQQPYIIGGALEQDMYVFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAV
HYNSKYKDFTEAKNKPDGLAVVAFFIQACGEKDCPEFKKITEGIRIVQKI
HTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVTWIIYRTPIYV
SRGQVQVFRNLQSCPKDESKKIVNNYREIQRPHKDPEIFFARNTNPKSKL
ASFLDH

BO10221.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:21:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG11284-PE 250 CG11284-PE 1..250 1..250 1351 100 Plus
CG11284-PD 250 CG11284-PD 1..250 1..250 1351 100 Plus
CG11284-PC 250 CG11284-PC 1..250 1..250 1351 100 Plus
CG11284-PB 250 CG11284-PB 1..250 1..250 1351 100 Plus
CG11284-PA 250 CG11284-PA 1..250 1..250 1351 100 Plus